RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 GJB2P29033 226 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 LTKP29376 864 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 HSPA2P54652 639 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 LRRCC1Q9C099 1032 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 NUP62CLQ9H1M0 184 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
VTI1A-205ENST00000483122 ERBB3P21860 1342 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 RAD50Q92878 1312 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 F6X3S4 739 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 SLC4A10Q6U841 1118 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 CCDC83Q8IWF9 413 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 RASEFQ8IZ41 740 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 LIMCH1Q9UPQ0 1083 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 STRCQ7RTU9 1775 aa14.04□□□□□ -0.16
VTI1A-205ENST00000483122 ARID5BQ14865 1188 aa14.03□□□□□ -0.16
VTI1A-205ENST00000483122 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
VTI1A-205ENST00000483122 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
VTI1A-205ENST00000483122 CABP1Q9NZU7 370 aa14.03□□□□□ -0.16
VTI1A-205ENST00000483122 NRXN3Q9Y4C0 1643 aa14.03□□□□□ -0.16
VTI1A-205ENST00000483122 MAP4K4O95819 1239 aaPredicted RBP14.03□□□□□ -0.16
VTI1A-205ENST00000483122 CLIP2Q9UDT6 1046 aa14.03□□□□□ -0.16
VTI1A-205ENST00000483122 PTPRCP08575 1304 aa14.02□□□□□ -0.16
VTI1A-205ENST00000483122 VPS37CA5D8V6 355 aaPredicted RBP14.02□□□□□ -0.16
VTI1A-205ENST00000483122 DIP2AQ14689 1571 aa14.02□□□□□ -0.17
VTI1A-205ENST00000483122 NPHP1O15259 732 aa14.02□□□□□ -0.17
VTI1A-205ENST00000483122 G2E3Q7L622 706 aa14.02□□□□□ -0.17
VTI1A-205ENST00000483122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-205ENST00000483122 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.17
VTI1A-205ENST00000483122 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
VTI1A-205ENST00000483122 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-205ENST00000483122 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 HNRNPH2P55795 449 aaKnown RBP14.01□□□□□ -0.17
VTI1A-205ENST00000483122 FAM173BQ6P4H8 233 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
VTI1A-205ENST00000483122 ERO1AQ96HE7 468 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 CHMP4AQ9BY43 222 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 STAP2Q9UGK3 403 aa14.01□□□□□ -0.17
VTI1A-205ENST00000483122 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
VTI1A-205ENST00000483122 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
VTI1A-205ENST00000483122 NCKAP5LQ9HCH0 1330 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 CYP2C19P33261 490 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 GTF3C6Q969F1 213 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 PRAM1Q96QH2 718 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
VTI1A-205ENST00000483122 DACT1Q9NYF0 836 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 ALKQ9UM73 1620 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 GNAI2P04899 355 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 PTPN14Q15678 1187 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 NYAP1Q6ZVC0 841 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 LRRC8AQ8IWT6 810 aa14□□□□□ -0.17
VTI1A-205ENST00000483122 ST3GAL1Q11201 340 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 FERMT3Q86UX7 667 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
VTI1A-205ENST00000483122 DNAJC25Q9H1X3 360 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 TRMT1Q9NXH9 659 aaKnown RBP13.99□□□□□ -0.17
VTI1A-205ENST00000483122 CCDC171Q6TFL3 1326 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 CASTP20810 708 aaKnown RBP13.99□□□□□ -0.17
VTI1A-205ENST00000483122 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 HYPKQ9NX55 129 aa13.99□□□□□ -0.17
VTI1A-205ENST00000483122 CDK12Q9NYV4 1490 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-205ENST00000483122 ADAMTS13Q76LX8 1427 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 CHL1O00533 1208 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 SGSM2O43147 1006 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 MCM10Q7L590 875 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 IL1RAPL2Q9NP60 686 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 FEZ2Q9UHY8 353 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-205ENST00000483122 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
VTI1A-205ENST00000483122 SLU7O95391 586 aaKnown RBP13.98□□□□□ -0.17
VTI1A-205ENST00000483122 ZNF165P49910 485 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 FAM193AP78312 1265 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
VTI1A-205ENST00000483122 KRT85P78386 507 aa13.97□□□□□ -0.17
VTI1A-205ENST00000483122 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-205ENST00000483122 CCT4P50991 539 aaKnown RBP13.96□□□□□ -0.17
VTI1A-205ENST00000483122 CDC37L1Q7L3B6 337 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 NECAB1Q8N987 351 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 LRRN4CLQ8ND94 238 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
VTI1A-205ENST00000483122 FHOD1Q9Y613 1164 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 SKILP12757 684 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 CDC25BP30305 580 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-205ENST00000483122 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
VTI1A-205ENST00000483122 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 RBM43Q6ZSC3 357 aaKnown RBP13.96□□□□□ -0.17
VTI1A-205ENST00000483122 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 CLSTN2Q9H4D0 955 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
VTI1A-205ENST00000483122 H2AFXP16104 143 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-205ENST00000483122 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
VTI1A-205ENST00000483122 RAD51AP2Q09MP3 1159 aa13.95□□□□□ -0.18
VTI1A-205ENST00000483122 RRS1Q15050 365 aaKnown RBP13.95□□□□□ -0.18
VTI1A-205ENST00000483122 ADCK5Q3MIX3 580 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms