RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 TNS1Q9HBL0 1735 aaKnown RBP19.01■□□□□ 0.63
PHGDH-205ENST00000482968 TBC1D2BQ9UPU7 963 aa19.01■□□□□ 0.63
PHGDH-205ENST00000482968 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
PHGDH-205ENST00000482968 BEND3Q5T5X7 828 aa19■□□□□ 0.63
PHGDH-205ENST00000482968 KIF6Q6ZMV9 814 aa19■□□□□ 0.63
PHGDH-205ENST00000482968 GNPATO15228 680 aa18.99■□□□□ 0.63
PHGDH-205ENST00000482968 SF3B2Q13435 895 aaKnown RBP18.99■□□□□ 0.63
PHGDH-205ENST00000482968 SMIM5Q71RC9 77 aa18.99■□□□□ 0.63
PHGDH-205ENST00000482968 DZIP3Q86Y13 1208 aaKnown RBP18.99■□□□□ 0.63
PHGDH-205ENST00000482968 METTL22Q9BUU2 404 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-205ENST00000482968 SRCIN1Q9C0H9 1055 aa18.99■□□□□ 0.63
PHGDH-205ENST00000482968 MYD88Q99836 296 aa18.98■□□□□ 0.63
PHGDH-205ENST00000482968 RREB1Q92766 1687 aa18.98■□□□□ 0.63
PHGDH-205ENST00000482968 RPS6KA4O75676 772 aa18.98■□□□□ 0.63
PHGDH-205ENST00000482968 EN1Q05925 392 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-205ENST00000482968 NEXNQ0ZGT2 675 aa18.98■□□□□ 0.63
PHGDH-205ENST00000482968 AK7Q96M32 723 aa18.98■□□□□ 0.63
PHGDH-205ENST00000482968 PPP4R2Q9NY27 417 aa18.98■□□□□ 0.63
PHGDH-205ENST00000482968 CWF19L2Q2TBE0 894 aaKnown RBP18.97■□□□□ 0.63
PHGDH-205ENST00000482968 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
PHGDH-205ENST00000482968 C4BP0C0L5 1744 aa18.97■□□□□ 0.63
PHGDH-205ENST00000482968 MAP3K15Q6ZN16 1313 aa18.97■□□□□ 0.63
PHGDH-205ENST00000482968 LINS1Q8NG48 757 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
PHGDH-205ENST00000482968 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 PXDNLA1KZ92 1463 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 COL15A1P39059 1388 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 ATP5J2-PTCD1G3V325 749 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 EZH2Q15910 746 aaKnown RBP18.96■□□□□ 0.63
PHGDH-205ENST00000482968 HLFQ16534 295 aa18.96■□□□□ 0.63
PHGDH-205ENST00000482968 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
PHGDH-205ENST00000482968 AMIGO3Q86WK7 504 aa18.95■□□□□ 0.62
PHGDH-205ENST00000482968 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
PHGDH-205ENST00000482968 MEIS3Q99687 375 aa18.95■□□□□ 0.62
PHGDH-205ENST00000482968 ATP10DQ9P241 1426 aa18.95■□□□□ 0.62
PHGDH-205ENST00000482968 A0A087WZG4 1122 aa18.94■□□□□ 0.62
PHGDH-205ENST00000482968 ALDH1L1O75891 902 aa18.94■□□□□ 0.62
PHGDH-205ENST00000482968 USP44Q9H0E7 712 aa18.94■□□□□ 0.62
PHGDH-205ENST00000482968 NEURL1BA8MQ27 555 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 ERVV-1B6SEH8 477 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 PHF14O94880 888 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 BAG6P46379 1132 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 TCIRG1Q13488 830 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 AAMPQ13685 434 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 GIGYF2Q6Y7W6 1299 aaKnown RBP18.93■□□□□ 0.62
PHGDH-205ENST00000482968 DEFB132Q7Z7B7 95 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 TRAPPC3LQ5T215 181 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
PHGDH-205ENST00000482968 N4BP2Q86UW6 1770 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-205ENST00000482968 CAMTA2O94983 1202 aa18.92■□□□□ 0.62
PHGDH-205ENST00000482968 ARHGEF1Q92888 912 aaKnown RBP18.92■□□□□ 0.62
PHGDH-205ENST00000482968 CCDC136Q96JN2 1154 aa18.92■□□□□ 0.62
PHGDH-205ENST00000482968 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-205ENST00000482968 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
PHGDH-205ENST00000482968 GNAI3P08754 354 aa18.91■□□□□ 0.62
PHGDH-205ENST00000482968 NBPF7P0C2Y1 421 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-205ENST00000482968 GCKRQ14397 625 aa18.91■□□□□ 0.62
PHGDH-205ENST00000482968 CCDC125Q86Z20 511 aa18.91■□□□□ 0.62
PHGDH-205ENST00000482968 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-205ENST00000482968 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
PHGDH-205ENST00000482968 NUP98P52948 1817 aa18.9■□□□□ 0.62
PHGDH-205ENST00000482968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
PHGDH-205ENST00000482968 RFC4P35249 363 aa18.9■□□□□ 0.62
PHGDH-205ENST00000482968 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
PHGDH-205ENST00000482968 TFCP2L1Q9NZI6 479 aa18.9■□□□□ 0.62
PHGDH-205ENST00000482968 AFDNP55196 1824 aaKnown RBP18.89■□□□□ 0.62
PHGDH-205ENST00000482968 ZPR1O75312 459 aa18.89■□□□□ 0.61
PHGDH-205ENST00000482968 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-205ENST00000482968 GPTP24298 496 aa18.89■□□□□ 0.61
PHGDH-205ENST00000482968 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
PHGDH-205ENST00000482968 ISCA1Q9BUE6 129 aa18.89■□□□□ 0.61
PHGDH-205ENST00000482968 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
PHGDH-205ENST00000482968 NARFQ9UHQ1 456 aa18.89■□□□□ 0.61
PHGDH-205ENST00000482968 GRM8O00222 908 aa18.88■□□□□ 0.61
PHGDH-205ENST00000482968 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
PHGDH-205ENST00000482968 CCDC191Q8NCU4 936 aa18.88■□□□□ 0.61
PHGDH-205ENST00000482968 JARID2Q92833 1246 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-205ENST00000482968 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
PHGDH-205ENST00000482968 CWC25Q9NXE8 425 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-205ENST00000482968 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
PHGDH-205ENST00000482968 GNAI2P04899 355 aa18.87■□□□□ 0.61
PHGDH-205ENST00000482968 ADRA2BP18089 450 aa18.87■□□□□ 0.61
PHGDH-205ENST00000482968 SSFA2P28290 1259 aa18.87■□□□□ 0.61
PHGDH-205ENST00000482968 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
PHGDH-205ENST00000482968 ZNF652Q9Y2D9 606 aa18.87■□□□□ 0.61
PHGDH-205ENST00000482968 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-205ENST00000482968 CLEC4GQ6UXB4 293 aa18.86■□□□□ 0.61
PHGDH-205ENST00000482968 ZNF34Q8IZ26 560 aa18.86■□□□□ 0.61
PHGDH-205ENST00000482968 LRRFIP2Q9Y608 721 aaKnown RBP18.86■□□□□ 0.61
PHGDH-205ENST00000482968 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
PHGDH-205ENST00000482968 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
PHGDH-205ENST00000482968 UTYO14607 1347 aa18.85■□□□□ 0.61
PHGDH-205ENST00000482968 UBE3BQ7Z3V4 1068 aa18.85■□□□□ 0.61
PHGDH-205ENST00000482968 NIP7Q9Y221 180 aaKnown RBP eCLIP18.85■□□□□ 0.61
PHGDH-205ENST00000482968 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
PHGDH-205ENST00000482968 IGHDP01880 384 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms