RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TTLL7Q6ZT98 887 aa27.01■■□□□ 1.91
SEC13-217ENST00000482647 LRP10Q7Z4F1 713 aa27.01■■□□□ 1.91
SEC13-217ENST00000482647 SPINK5Q9NQ38 1064 aaPredicted RBP27.01■■□□□ 1.91
SEC13-217ENST00000482647 TSPYL6Q8N831 410 aa27■■□□□ 1.91
SEC13-217ENST00000482647 SETDB2Q96T68 719 aa27■■□□□ 1.91
SEC13-217ENST00000482647 MAP3K15Q6ZN16 1313 aa26.99■■□□□ 1.91
SEC13-217ENST00000482647 TWISTNBQ3B726 338 aaPredicted RBP26.99■■□□□ 1.91
SEC13-217ENST00000482647 SERPINB2P05120 415 aa26.98■■□□□ 1.91
SEC13-217ENST00000482647 CCDC30Q5VVM6 783 aa26.98■■□□□ 1.91
SEC13-217ENST00000482647 COPS6Q7L5N1 327 aa26.98■■□□□ 1.91
SEC13-217ENST00000482647 HYPKQ9NX55 129 aa26.98■■□□□ 1.91
SEC13-217ENST00000482647 HLFQ16534 295 aa26.97■■□□□ 1.91
SEC13-217ENST00000482647 XAGE3Q8WTP9 111 aa26.97■■□□□ 1.91
SEC13-217ENST00000482647 AIMP1Q12904 312 aaKnown RBP26.96■■□□□ 1.91
SEC13-217ENST00000482647 NLGN2Q8NFZ4 835 aa26.96■■□□□ 1.91
SEC13-217ENST00000482647 ZBTB3Q9H5J0 574 aa26.96■■□□□ 1.91
SEC13-217ENST00000482647 DCAF8L1A6NGE4 600 aa26.95■■□□□ 1.9
SEC13-217ENST00000482647 E9PSI1 815 aa26.95■■□□□ 1.9
SEC13-217ENST00000482647 EXOSC9Q06265 439 aaKnown RBP26.95■■□□□ 1.9
SEC13-217ENST00000482647 CARMIL3Q8ND23 1372 aa26.95■■□□□ 1.9
SEC13-217ENST00000482647 NIP7Q9Y221 180 aaKnown RBP eCLIP26.94■■□□□ 1.9
SEC13-217ENST00000482647 SCN7AQ01118 1682 aa26.92■■□□□ 1.9
SEC13-217ENST00000482647 TGFB2P61812 414 aa26.92■■□□□ 1.9
SEC13-217ENST00000482647 STK31Q9BXU1 1019 aa26.92■■□□□ 1.9
SEC13-217ENST00000482647 C10orf71Q711Q0 1435 aa26.91■■□□□ 1.9
SEC13-217ENST00000482647 VAMP4O75379 141 aa26.91■■□□□ 1.9
SEC13-217ENST00000482647 GIGYF2Q6Y7W6 1299 aaKnown RBP26.91■■□□□ 1.9
SEC13-217ENST00000482647 NPHP1O15259 732 aa26.9■■□□□ 1.9
SEC13-217ENST00000482647 SLFN5Q08AF3 891 aa26.9■■□□□ 1.9
SEC13-217ENST00000482647 NBPF5PQ86XG9 351 aaPredicted RBP26.9■■□□□ 1.9
SEC13-217ENST00000482647 ANKRD13DQ6ZTN6 518 aa26.89■■□□□ 1.9
SEC13-217ENST00000482647 CNBD1Q8NA66 436 aa26.89■■□□□ 1.9
SEC13-217ENST00000482647 HSP90AB3PQ58FF7 597 aa26.88■■□□□ 1.89
SEC13-217ENST00000482647 TPTE2Q6XPS3 522 aa26.88■■□□□ 1.89
SEC13-217ENST00000482647 PLBD2Q8NHP8 589 aa26.88■■□□□ 1.89
SEC13-217ENST00000482647 BCORQ6W2J9 1755 aa26.87■■□□□ 1.89
SEC13-217ENST00000482647 HNRNPUQ00839 825 aaKnown RBP eCLIP26.87■■□□□ 1.89
SEC13-217ENST00000482647 PRR5LQ6MZQ0 368 aa26.87■■□□□ 1.89
SEC13-217ENST00000482647 CDCA7LQ96GN5 454 aa26.87■■□□□ 1.89
SEC13-217ENST00000482647 PHAXQ9H814 394 aaKnown RBP26.87■■□□□ 1.89
SEC13-217ENST00000482647 ATP10DQ9P241 1426 aa26.87■■□□□ 1.89
SEC13-217ENST00000482647 TCERG1O14776 1098 aaKnown RBP26.86■■□□□ 1.89
SEC13-217ENST00000482647 SLC4A2P04920 1241 aa26.86■■□□□ 1.89
SEC13-217ENST00000482647 ZNF34Q8IZ26 560 aa26.86■■□□□ 1.89
SEC13-217ENST00000482647 A0A0G2JLW4 131 aa26.85■■□□□ 1.89
SEC13-217ENST00000482647 DPEP1P16444 411 aa26.85■■□□□ 1.89
SEC13-217ENST00000482647 GPTP24298 496 aa26.85■■□□□ 1.89
SEC13-217ENST00000482647 ST5P78524 1137 aa26.85■■□□□ 1.89
SEC13-217ENST00000482647 GPR162Q16538 588 aa26.85■■□□□ 1.89
SEC13-217ENST00000482647 BRIP1Q9BX63 1249 aa26.85■■□□□ 1.89
SEC13-217ENST00000482647 GOLGB1Q14789 3259 aaKnown RBP26.85■■□□□ 1.89
SEC13-217ENST00000482647 FAM177BA6PVY3 158 aa26.84■■□□□ 1.89
SEC13-217ENST00000482647 DDX58O95786 925 aaKnown RBP26.84■■□□□ 1.89
SEC13-217ENST00000482647 TCIRG1Q13488 830 aa26.84■■□□□ 1.89
SEC13-217ENST00000482647 PARP10Q53GL7 1025 aa26.84■■□□□ 1.89
SEC13-217ENST00000482647 NYXQ9GZU5 481 aa26.84■■□□□ 1.89
SEC13-217ENST00000482647 GTF2E1P29083 439 aaPredicted RBP26.83■■□□□ 1.89
SEC13-217ENST00000482647 RIC3Q7Z5B4 369 aa26.83■■□□□ 1.89
SEC13-217ENST00000482647 TRMT2AQ8IZ69 625 aaKnown RBP26.83■■□□□ 1.89
SEC13-217ENST00000482647 PELP1Q8IZL8 1130 aaKnown RBP26.83■■□□□ 1.89
SEC13-217ENST00000482647 CCDC24Q8N4L8 307 aa26.82■■□□□ 1.88
SEC13-217ENST00000482647 PXDNLA1KZ92 1463 aa26.81■■□□□ 1.88
SEC13-217ENST00000482647 PDE6BP35913 854 aa26.81■■□□□ 1.88
SEC13-217ENST00000482647 PPP1R42Q7Z4L9 355 aa26.81■■□□□ 1.88
SEC13-217ENST00000482647 PDZRN3Q9UPQ7 1066 aa26.81■■□□□ 1.88
SEC13-217ENST00000482647 UBN2Q6ZU65 1347 aa26.81■■□□□ 1.88
SEC13-217ENST00000482647 SUSD4Q5VX71 490 aa26.8■■□□□ 1.88
SEC13-217ENST00000482647 NRXN2Q9P2S2 1712 aa26.79■■□□□ 1.88
SEC13-217ENST00000482647 H0YIN7 160 aa26.79■■□□□ 1.88
SEC13-217ENST00000482647 CHRNA5P30532 468 aa26.79■■□□□ 1.88
SEC13-217ENST00000482647 C2CD5Q86YS7 1000 aa26.79■■□□□ 1.88
SEC13-217ENST00000482647 PIM2Q9P1W9 311 aa26.79■■□□□ 1.88
SEC13-217ENST00000482647 KIF13BQ9NQT8 1826 aa26.79■■□□□ 1.88
SEC13-217ENST00000482647 KCNA3P22001 575 aa26.78■■□□□ 1.88
SEC13-217ENST00000482647 UTP14AQ9BVJ6 771 aaKnown RBP26.78■■□□□ 1.88
SEC13-217ENST00000482647 AFDNP55196 1824 aaKnown RBP26.77■■□□□ 1.88
SEC13-217ENST00000482647 IBTKQ9P2D0 1353 aaPredicted RBP26.77■■□□□ 1.88
SEC13-217ENST00000482647 KSR2Q6VAB6 950 aa26.77■■□□□ 1.88
SEC13-217ENST00000482647 G2E3Q7L622 706 aa26.77■■□□□ 1.88
SEC13-217ENST00000482647 NLRP10Q86W26 655 aa26.77■■□□□ 1.88
SEC13-217ENST00000482647 WWC3Q9ULE0 1092 aa26.77■■□□□ 1.88
SEC13-217ENST00000482647 GRIN3BO60391 1043 aa26.76■■□□□ 1.87
SEC13-217ENST00000482647 YBX3P16989 372 aaKnown RBP eCLIP26.76■■□□□ 1.871e-12■■□□□ 12.7
SEC13-217ENST00000482647 FLIIQ13045 1269 aa26.76■■□□□ 1.87
SEC13-217ENST00000482647 ZNF428Q96B54 188 aa26.76■■□□□ 1.87
SEC13-217ENST00000482647 ISCA1Q9BUE6 129 aa26.76■■□□□ 1.87
SEC13-217ENST00000482647 UTRNP46939 3433 aa26.76■■□□□ 1.87
SEC13-217ENST00000482647 NUP98P52948 1817 aa26.76■■□□□ 1.87
SEC13-217ENST00000482647 PI4KAP2A4QPH2 592 aa26.75■■□□□ 1.87
SEC13-217ENST00000482647 NTSR2O95665 410 aa26.75■■□□□ 1.87
SEC13-217ENST00000482647 ERFEQ4G0M1 354 aa26.75■■□□□ 1.87
SEC13-217ENST00000482647 NUTM1Q86Y26 1132 aa26.75■■□□□ 1.87
SEC13-217ENST00000482647 PI4KAP1Q8N8J0 262 aa26.75■■□□□ 1.87
SEC13-217ENST00000482647 ATP5J2-PTCD1G3V325 749 aa26.74■■□□□ 1.87
SEC13-217ENST00000482647 TRIM28Q13263 835 aaKnown RBP26.74■■□□□ 1.87
SEC13-217ENST00000482647 DALRD3Q5D0E6 543 aaKnown RBP26.74■■□□□ 1.87
SEC13-217ENST00000482647 BCS1LQ9Y276 419 aa26.74■■□□□ 1.87
SEC13-217ENST00000482647 MAP3K2Q9Y2U5 619 aa26.74■■□□□ 1.87
SEC13-217ENST00000482647 RNF123Q5XPI4 1314 aa26.73■■□□□ 1.87
SEC13-217ENST00000482647 CT47B1P0C2W7 299 aaPredicted RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms