RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 NBPF15Q8N660 670 aa15.98■□□□□ 0.15
FAM3D-202ENST00000482623 ZNF622Q969S3 477 aaKnown RBP eCLIP15.98■□□□□ 0.15
FAM3D-202ENST00000482623 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
FAM3D-202ENST00000482623 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
FAM3D-202ENST00000482623 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
FAM3D-202ENST00000482623 MAPK8IP3Q9UPT6 1336 aa15.96■□□□□ 0.15
FAM3D-202ENST00000482623 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
FAM3D-202ENST00000482623 NFKBIEO00221 500 aa15.96■□□□□ 0.15
FAM3D-202ENST00000482623 NPR1P16066 1061 aa15.96■□□□□ 0.15
FAM3D-202ENST00000482623 RRAGCQ9HB90 399 aa15.96■□□□□ 0.15
FAM3D-202ENST00000482623 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.14
FAM3D-202ENST00000482623 ALDH1B1P30837 517 aa15.95■□□□□ 0.14
FAM3D-202ENST00000482623 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
FAM3D-202ENST00000482623 NYXQ9GZU5 481 aa15.95■□□□□ 0.14
FAM3D-202ENST00000482623 C21orf2O43822 256 aa15.94■□□□□ 0.14
FAM3D-202ENST00000482623 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
FAM3D-202ENST00000482623 DNAJC5GQ8N7S2 189 aa15.94■□□□□ 0.14
FAM3D-202ENST00000482623 SMC1BQ8NDV3 1235 aa15.94■□□□□ 0.14
FAM3D-202ENST00000482623 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
FAM3D-202ENST00000482623 NIP7Q9Y221 180 aaKnown RBP eCLIP15.94■□□□□ 0.14
FAM3D-202ENST00000482623 SCN7AQ01118 1682 aa15.93■□□□□ 0.14
FAM3D-202ENST00000482623 RASSF7Q02833 373 aa15.93■□□□□ 0.14
FAM3D-202ENST00000482623 TAOK3Q9H2K8 898 aa15.93■□□□□ 0.14
FAM3D-202ENST00000482623 MIS18AQ9NYP9 233 aa15.93■□□□□ 0.14
FAM3D-202ENST00000482623 PRELPP51888 382 aa15.92■□□□□ 0.14
FAM3D-202ENST00000482623 ERFEQ4G0M1 354 aa15.92■□□□□ 0.14
FAM3D-202ENST00000482623 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
FAM3D-202ENST00000482623 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
FAM3D-202ENST00000482623 DLEC1Q9Y238 1755 aa15.92■□□□□ 0.14
FAM3D-202ENST00000482623 RIPK4P57078 832 aa15.91■□□□□ 0.14
FAM3D-202ENST00000482623 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
FAM3D-202ENST00000482623 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
FAM3D-202ENST00000482623 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
FAM3D-202ENST00000482623 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
FAM3D-202ENST00000482623 GTF2E1P29083 439 aaPredicted RBP15.9■□□□□ 0.14
FAM3D-202ENST00000482623 PIP4K2AP48426 406 aaPredicted RBP15.9■□□□□ 0.14
FAM3D-202ENST00000482623 HLFQ16534 295 aa15.9■□□□□ 0.14
FAM3D-202ENST00000482623 CRY2Q49AN0 593 aa15.9■□□□□ 0.14
FAM3D-202ENST00000482623 SBF1O95248 1867 aa15.9■□□□□ 0.14
FAM3D-202ENST00000482623 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
FAM3D-202ENST00000482623 TMPOP42166 694 aaKnown RBP15.89■□□□□ 0.13
FAM3D-202ENST00000482623 CCDC93Q567U6 631 aa15.89■□□□□ 0.13
FAM3D-202ENST00000482623 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
FAM3D-202ENST00000482623 HOXA10P31260 410 aaPredicted RBP15.88■□□□□ 0.13
FAM3D-202ENST00000482623 PARP10Q53GL7 1025 aa15.88■□□□□ 0.13
FAM3D-202ENST00000482623 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
FAM3D-202ENST00000482623 ZNF34Q8IZ26 560 aa15.88■□□□□ 0.13
FAM3D-202ENST00000482623 TSPYL4Q9UJ04 414 aa15.88■□□□□ 0.13
FAM3D-202ENST00000482623 RRP7AQ9Y3A4 280 aaKnown RBP15.88■□□□□ 0.13
FAM3D-202ENST00000482623 RIC1Q4ADV7 1423 aa15.87■□□□□ 0.13
FAM3D-202ENST00000482623 POTECB2RU33 542 aa15.87■□□□□ 0.13
FAM3D-202ENST00000482623 FKBP4Q02790 459 aaKnown RBP eCLIP15.87■□□□□ 0.13
FAM3D-202ENST00000482623 RNF123Q5XPI4 1314 aa15.87■□□□□ 0.13
FAM3D-202ENST00000482623 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 CHL1O00533 1208 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
FAM3D-202ENST00000482623 SLC10A5Q5PT55 438 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 PPP1R42Q7Z4L9 355 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 JMYQ8N9B5 988 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 RUNDC1Q96C34 613 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 KLRG1Q96E93 195 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 PSMD1Q99460 953 aa15.86■□□□□ 0.13
FAM3D-202ENST00000482623 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 ANKRD31Q8N7Z5 1873 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 HOXB7P09629 217 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 PDIA6Q15084 440 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
FAM3D-202ENST00000482623 CRAMP1Q96RY5 1269 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
FAM3D-202ENST00000482623 VPS33BQ9H267 617 aa15.85■□□□□ 0.13
FAM3D-202ENST00000482623 TNRC6CQ9HCJ0 1690 aaKnown RBP15.85■□□□□ 0.13
FAM3D-202ENST00000482623 MYL6BP14649 208 aa15.84■□□□□ 0.13
FAM3D-202ENST00000482623 IFFO2Q5TF58 517 aa15.84■□□□□ 0.13
FAM3D-202ENST00000482623 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
FAM3D-202ENST00000482623 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
FAM3D-202ENST00000482623 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
FAM3D-202ENST00000482623 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
FAM3D-202ENST00000482623 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
FAM3D-202ENST00000482623 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
FAM3D-202ENST00000482623 RBM17Q96I25 401 aaKnown RBP15.82■□□□□ 0.12
FAM3D-202ENST00000482623 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
FAM3D-202ENST00000482623 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
FAM3D-202ENST00000482623 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
FAM3D-202ENST00000482623 FZD9O00144 591 aa15.81■□□□□ 0.12
FAM3D-202ENST00000482623 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
FAM3D-202ENST00000482623 SYNE4Q8N205 404 aa15.81■□□□□ 0.12
FAM3D-202ENST00000482623 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
FAM3D-202ENST00000482623 WDR90Q96KV7 1748 aa15.81■□□□□ 0.12
FAM3D-202ENST00000482623 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
FAM3D-202ENST00000482623 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
FAM3D-202ENST00000482623 NTSR2O95665 410 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
FAM3D-202ENST00000482623 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
FAM3D-202ENST00000482623 JDP2Q8WYK2 163 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 CFAP44Q96MT7 982 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms