RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MARSP56192 900 aaKnown RBP10.41□□□□□ -0.74
SNX13-208ENST00000482558 GPAT2Q6NUI2 795 aa10.41□□□□□ -0.74
SNX13-208ENST00000482558 POM121Q96HA1 1249 aa10.41□□□□□ -0.74
SNX13-208ENST00000482558 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
SNX13-208ENST00000482558 PRKRIP1Q9H875 184 aaPredicted RBP10.41□□□□□ -0.74
SNX13-208ENST00000482558 FANCAO15360 1455 aa10.41□□□□□ -0.74
SNX13-208ENST00000482558 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
SNX13-208ENST00000482558 NEURL4Q96JN8 1562 aa10.4□□□□□ -0.74
SNX13-208ENST00000482558 ZFYVE16Q7Z3T8 1539 aa10.4□□□□□ -0.74
SNX13-208ENST00000482558 NEFLP07196 543 aa10.4□□□□□ -0.74
SNX13-208ENST00000482558 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.74
SNX13-208ENST00000482558 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.75
SNX13-208ENST00000482558 TRAPPC8Q9Y2L5 1435 aa10.4□□□□□ -0.75
SNX13-208ENST00000482558 CDC14CA4D256 554 aa10.39□□□□□ -0.75
SNX13-208ENST00000482558 KCNA1Q09470 495 aa10.39□□□□□ -0.75
SNX13-208ENST00000482558 DCAF11Q8TEB1 546 aa10.39□□□□□ -0.75
SNX13-208ENST00000482558 PRM3Q9NNZ6 103 aa10.39□□□□□ -0.75
SNX13-208ENST00000482558 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
SNX13-208ENST00000482558 DEPDC5O75140 1603 aa10.39□□□□□ -0.75
SNX13-208ENST00000482558 CTSOP43234 321 aaPredicted RBP10.38□□□□□ -0.75
SNX13-208ENST00000482558 ARHGAP9Q9BRR9 750 aa10.38□□□□□ -0.75
SNX13-208ENST00000482558 ASXL2Q76L83 1435 aa10.38□□□□□ -0.75
SNX13-208ENST00000482558 INO80Q9ULG1 1556 aaPredicted RBP10.38□□□□□ -0.75
SNX13-208ENST00000482558 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
SNX13-208ENST00000482558 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
SNX13-208ENST00000482558 ADGRL1O94910 1474 aa10.37□□□□□ -0.75
SNX13-208ENST00000482558 PLA2R1Q13018 1463 aa10.37□□□□□ -0.75
SNX13-208ENST00000482558 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
SNX13-208ENST00000482558 ZNF326Q5BKZ1 582 aaKnown RBP10.37□□□□□ -0.75
SNX13-208ENST00000482558 DHX29Q7Z478 1369 aaKnown RBP10.37□□□□□ -0.75
SNX13-208ENST00000482558 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 WASHC2CQ9Y4E1 1318 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 PTPRTO14522 1441 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 SRSF11Q05519 484 aaKnown RBP10.36□□□□□ -0.75
SNX13-208ENST00000482558 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 INSM2Q96T92 566 aaPredicted RBP10.36□□□□□ -0.75
SNX13-208ENST00000482558 SUPT16HQ9Y5B9 1047 aaKnown RBP10.36□□□□□ -0.75
SNX13-208ENST00000482558 TET3O43151 1660 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 TRPM2O94759 1503 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
SNX13-208ENST00000482558 VWDEQ8N2E2 1590 aa10.35□□□□□ -0.75
SNX13-208ENST00000482558 SCAPERQ9BY12 1400 aa10.35□□□□□ -0.75
SNX13-208ENST00000482558 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
SNX13-208ENST00000482558 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
SNX13-208ENST00000482558 RALBP1Q15311 655 aa10.35□□□□□ -0.75
SNX13-208ENST00000482558 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
SNX13-208ENST00000482558 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
SNX13-208ENST00000482558 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
SNX13-208ENST00000482558 RELBQ01201 579 aa10.34□□□□□ -0.75
SNX13-208ENST00000482558 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
SNX13-208ENST00000482558 WWC1Q8IX03 1113 aa10.34□□□□□ -0.75
SNX13-208ENST00000482558 AGBL1Q96MI9 1066 aa10.34□□□□□ -0.75
SNX13-208ENST00000482558 POLMQ9NP87 494 aaPredicted RBP10.34□□□□□ -0.75
SNX13-208ENST00000482558 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
SNX13-208ENST00000482558 A2MP01023 1474 aa10.34□□□□□ -0.75
SNX13-208ENST00000482558 ABL2P42684 1182 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 CDCA8Q53HL2 280 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 ZBTB33Q86T24 672 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
SNX13-208ENST00000482558 AFAP1Q8N556 730 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 MRS2Q9HD23 443 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 HMX1Q9NP08 348 aaPredicted RBP10.33□□□□□ -0.76
SNX13-208ENST00000482558 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 GPSM3Q9Y4H4 160 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 LMTK2Q8IWU2 1503 aa10.33□□□□□ -0.76
SNX13-208ENST00000482558 NEO1Q92859 1461 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 BRD1O95696 1058 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 HNRNPUQ00839 825 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNX13-208ENST00000482558 CCDC27Q2M243 656 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 LYPD4Q6UWN0 246 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 LRRN4Q8WUT4 740 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
SNX13-208ENST00000482558 ENAMQ9NRM1 1142 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 BCORL1Q5H9F3 1711 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 ZBED9Q6R2W3 1325 aa10.32□□□□□ -0.76
SNX13-208ENST00000482558 MLH3Q9UHC1 1453 aa10.31□□□□□ -0.76
SNX13-208ENST00000482558 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
SNX13-208ENST00000482558 CD109Q6YHK3 1445 aa10.31□□□□□ -0.76
SNX13-208ENST00000482558 E9PCH4 1651 aa10.31□□□□□ -0.76
SNX13-208ENST00000482558 CEP152O94986 1710 aa10.3□□□□□ -0.76
SNX13-208ENST00000482558 CELA2BP08218 269 aaPredicted RBP10.3□□□□□ -0.76
SNX13-208ENST00000482558 NBPF20Q3BBV1 942 aa10.3□□□□□ -0.76
SNX13-208ENST00000482558 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
SNX13-208ENST00000482558 BRD4O60885 1362 aaPredicted RBP10.29□□□□□ -0.76
SNX13-208ENST00000482558 EIF3AQ14152 1382 aaKnown RBP10.29□□□□□ -0.76
SNX13-208ENST00000482558 ADH1AP07327 375 aa10.29□□□□□ -0.76
SNX13-208ENST00000482558 TMF1P82094 1093 aa10.29□□□□□ -0.76
SNX13-208ENST00000482558 PTK2Q05397 1052 aa10.29□□□□□ -0.76
SNX13-208ENST00000482558 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
SNX13-208ENST00000482558 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
SNX13-208ENST00000482558 POGZQ7Z3K3 1410 aa10.29□□□□□ -0.76
SNX13-208ENST00000482558 RNF17Q9BXT8 1623 aaKnown RBP10.29□□□□□ -0.76
SNX13-208ENST00000482558 INSRP06213 1382 aa10.28□□□□□ -0.76
SNX13-208ENST00000482558 KIF3BO15066 747 aa10.28□□□□□ -0.76
SNX13-208ENST00000482558 GAS6Q14393 721 aa10.28□□□□□ -0.76
SNX13-208ENST00000482558 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
SNX13-208ENST00000482558 TRIM34Q9BYJ4 488 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms