RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 DDX46Q7L014 1031 aaKnown RBP10.92□□□□□ -0.66
CALD1-220ENST00000482470 LRRC2Q9BYS8 371 aa10.92□□□□□ -0.66
CALD1-220ENST00000482470 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
CALD1-220ENST00000482470 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
CALD1-220ENST00000482470 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
CALD1-220ENST00000482470 LINS1Q8NG48 757 aa10.92□□□□□ -0.66
CALD1-220ENST00000482470 KIF2CQ99661 725 aa10.92□□□□□ -0.66
CALD1-220ENST00000482470 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
CALD1-220ENST00000482470 HIP1O00291 1037 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 AK2P54819 239 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 TFIP11Q9UBB9 837 aaKnown RBP10.91□□□□□ -0.66
CALD1-220ENST00000482470 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 ZC3H13Q5T200 1668 aaKnown RBP10.91□□□□□ -0.66
CALD1-220ENST00000482470 CAMK4Q16566 473 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 STK11IPQ8N1F8 1099 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 EDC3Q96F86 508 aaKnown RBP10.91□□□□□ -0.66
CALD1-220ENST00000482470 FMNL2Q96PY5 1086 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 MED14O60244 1454 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 GJB2P29033 226 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 EVI5LQ96CN4 794 aa10.91□□□□□ -0.66
CALD1-220ENST00000482470 SPC24Q8NBT2 197 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 SUCLG2Q96I99 432 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 RBM8AQ9Y5S9 174 aaKnown RBP10.9□□□□□ -0.66
CALD1-220ENST00000482470 CPLX1O14810 134 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 STX6O43752 255 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
CALD1-220ENST00000482470 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 LMBR1LQ6UX01 489 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.66
CALD1-220ENST00000482470 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
CALD1-220ENST00000482470 SSH3Q8TE77 659 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 ZNF496Q96IT1 587 aaPredicted RBP10.9□□□□□ -0.66
CALD1-220ENST00000482470 FAM227BQ96M60 508 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
CALD1-220ENST00000482470 GOLIM4O00461 696 aa10.9□□□□□ -0.67
CALD1-220ENST00000482470 NMIQ13287 307 aaPredicted RBP10.9□□□□□ -0.67
CALD1-220ENST00000482470 CCDC57Q2TAC2 916 aa10.9□□□□□ -0.67
CALD1-220ENST00000482470 BEND3Q5T5X7 828 aa10.9□□□□□ -0.67
CALD1-220ENST00000482470 USP48Q86UV5 1035 aa10.9□□□□□ -0.67
CALD1-220ENST00000482470 C19orf44Q9H6X5 657 aa10.9□□□□□ -0.67
CALD1-220ENST00000482470 CLTCQ00610 1675 aaKnown RBP10.89□□□□□ -0.67
CALD1-220ENST00000482470 ALDH1L1O75891 902 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 GPTP24298 496 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 DDX21Q9NR30 783 aaKnown RBP eCLIP10.89□□□□□ -0.67
CALD1-220ENST00000482470 CEP126Q9P2H0 1117 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
CALD1-220ENST00000482470 USP16Q9Y5T5 823 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 ANAPC15P60006 121 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 GUCY1B3Q02153 619 aa10.89□□□□□ -0.67
CALD1-220ENST00000482470 SGSM2O43147 1006 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 PDCP20941 246 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 KRT85P78386 507 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 KIF3AQ9Y496 699 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 SNX14Q9Y5W7 946 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 ARHGEF28Q8N1W1 1705 aaKnown RBP10.88□□□□□ -0.67
CALD1-220ENST00000482470 BECN2A8MW95 431 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 CCT2P78371 535 aaKnown RBP10.88□□□□□ -0.67
CALD1-220ENST00000482470 TTC39AQ5SRH9 613 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 FAM173BQ6P4H8 233 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 LMBRD1Q9NUN5 540 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 USP25Q9UHP3 1055 aa10.88□□□□□ -0.67
CALD1-220ENST00000482470 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
CALD1-220ENST00000482470 TMEM131LA2VDJ0 1609 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
CALD1-220ENST00000482470 RALYLQ86SE5 291 aaKnown RBP10.87□□□□□ -0.67
CALD1-220ENST00000482470 RAB11FIP4Q86YS3 637 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 AXIN2Q9Y2T1 843 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 DNM1Q05193 864 aaKnown RBP10.87□□□□□ -0.67
CALD1-220ENST00000482470 TFCP2Q12800 502 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 GIMAP6Q6P9H5 292 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 ZSCAN30Q86W11 494 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 ZSCAN31Q96LW9 406 aaPredicted RBP10.87□□□□□ -0.67
CALD1-220ENST00000482470 RBSNQ9H1K0 784 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 IFIT1P09914 478 aaKnown RBP10.87□□□□□ -0.67
CALD1-220ENST00000482470 CKAP2LQ8IYA6 745 aa10.87□□□□□ -0.67
CALD1-220ENST00000482470 PREX1Q8TCU6 1659 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 ADAMTS13Q76LX8 1427 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 GOLGA6L19H0YKK7 550 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
CALD1-220ENST00000482470 HAND2P61296 217 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 TIMM10P62072 90 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 PTH1RQ03431 593 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 TRDNQ13061 729 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
CALD1-220ENST00000482470 GADD45BO75293 160 aaPredicted RBP10.86□□□□□ -0.67
CALD1-220ENST00000482470 SYT1P21579 422 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 SPATA32Q96LK8 384 aa10.86□□□□□ -0.67
CALD1-220ENST00000482470 ZSCAN22P10073 491 aaPredicted RBP10.86□□□□□ -0.67
CALD1-220ENST00000482470 A1BGP04217 495 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 ANKRD1Q15327 319 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms