RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 HSPA6P17066 643 aa17.74■□□□□ 0.43
CTDSP1-208ENST00000482272 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
CTDSP1-208ENST00000482272 LMNB1P20700 586 aa17.72■□□□□ 0.43
CTDSP1-208ENST00000482272 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
CTDSP1-208ENST00000482272 NBPF5PQ86XG9 351 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-208ENST00000482272 C16orf71Q8IYS4 520 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-208ENST00000482272 CNKSR1Q969H4 720 aa17.72■□□□□ 0.43
CTDSP1-208ENST00000482272 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-208ENST00000482272 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 RIPK4P57078 832 aa17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 RASSF7Q02833 373 aa17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
CTDSP1-208ENST00000482272 ZC3H4Q9UPT8 1303 aaKnown RBP17.71■□□□□ 0.42
CTDSP1-208ENST00000482272 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
CTDSP1-208ENST00000482272 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
CTDSP1-208ENST00000482272 NUP98P52948 1817 aa17.7■□□□□ 0.42
CTDSP1-208ENST00000482272 SLX4Q8IY92 1834 aa17.7■□□□□ 0.42
CTDSP1-208ENST00000482272 C21orf2O43822 256 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 SRGNP10124 158 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 HLFQ16534 295 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
CTDSP1-208ENST00000482272 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-208ENST00000482272 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
CTDSP1-208ENST00000482272 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
CTDSP1-208ENST00000482272 ERVV-1B6SEH8 477 aa17.67■□□□□ 0.42
CTDSP1-208ENST00000482272 TMPOP42166 694 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-208ENST00000482272 SOGA3Q5TF21 947 aa17.67■□□□□ 0.42
CTDSP1-208ENST00000482272 RBM46Q8TBY0 533 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-208ENST00000482272 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
CTDSP1-208ENST00000482272 GLTPD2A6NH11 291 aa17.66■□□□□ 0.42
CTDSP1-208ENST00000482272 FAM177BA6PVY3 158 aa17.66■□□□□ 0.42
CTDSP1-208ENST00000482272 NFKBIEO00221 500 aa17.66■□□□□ 0.42
CTDSP1-208ENST00000482272 DPY19L2Q6NUT2 758 aa17.66■□□□□ 0.42
CTDSP1-208ENST00000482272 KIF6Q6ZMV9 814 aa17.66■□□□□ 0.42
CTDSP1-208ENST00000482272 MYL6BP14649 208 aa17.65■□□□□ 0.42
CTDSP1-208ENST00000482272 NPR1P16066 1061 aa17.65■□□□□ 0.42
CTDSP1-208ENST00000482272 APLP1P51693 650 aa17.65■□□□□ 0.42
CTDSP1-208ENST00000482272 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTDSP1-208ENST00000482272 TTLL7Q6ZT98 887 aa17.65■□□□□ 0.42
CTDSP1-208ENST00000482272 PRKRIP1Q9H875 184 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-208ENST00000482272 KLRG2A4D1S0 409 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 PRPF40BQ6NWY9 871 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 MAP3K15Q6ZN16 1313 aa17.64■□□□□ 0.41
CTDSP1-208ENST00000482272 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 ALDH1B1P30837 517 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 FSTL1Q12841 308 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 RUNDC1Q96C34 613 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 ADAMTS8Q9UP79 889 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
CTDSP1-208ENST00000482272 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 PDIA6Q15084 440 aa17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 KRT24Q2M2I5 525 aa17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 LTBP3Q9NS15 1303 aa17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 ABCC12Q96J65 1359 aa17.62■□□□□ 0.41
CTDSP1-208ENST00000482272 UBN2Q6ZU65 1347 aa17.61■□□□□ 0.41
CTDSP1-208ENST00000482272 ANXA1P04083 346 aa17.6■□□□□ 0.41
CTDSP1-208ENST00000482272 CCDC93Q567U6 631 aa17.6■□□□□ 0.41
CTDSP1-208ENST00000482272 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
CTDSP1-208ENST00000482272 ANKRD36CQ5JPF3 1778 aa17.6■□□□□ 0.41
CTDSP1-208ENST00000482272 CCDC184Q52MB2 194 aa17.59■□□□□ 0.41
CTDSP1-208ENST00000482272 GIGYF2Q6Y7W6 1299 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-208ENST00000482272 SLC51AQ86UW1 340 aa17.59■□□□□ 0.41
CTDSP1-208ENST00000482272 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
CTDSP1-208ENST00000482272 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
CTDSP1-208ENST00000482272 GPTP24298 496 aa17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 OLFM4Q6UX06 510 aa17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 PPP1R42Q7Z4L9 355 aa17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 ZNF34Q8IZ26 560 aa17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 RTKN2Q8IZC4 609 aa17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-208ENST00000482272 CHL1O00533 1208 aa17.57■□□□□ 0.4
CTDSP1-208ENST00000482272 SUSD4Q5VX71 490 aa17.57■□□□□ 0.4
CTDSP1-208ENST00000482272 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
CTDSP1-208ENST00000482272 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
CTDSP1-208ENST00000482272 LAMB2P55268 1798 aa17.56■□□□□ 0.4
CTDSP1-208ENST00000482272 FKBP4Q02790 459 aaKnown RBP eCLIP17.55■□□□□ 0.45e-6■□□□□ 10.6
CTDSP1-208ENST00000482272 PARP10Q53GL7 1025 aa17.55■□□□□ 0.4
CTDSP1-208ENST00000482272 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-208ENST00000482272 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
CTDSP1-208ENST00000482272 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 POTECB2RU33 542 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms