RNA–Protein interactions for RNA: ENST00000481559.6

GRIA1-205, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIA1, Length 2,069 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-205ENST00000481559 ARHGAP45Q92619 1136 aa13.14□□□□□ -0.31
GRIA1-205ENST00000481559 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
GRIA1-205ENST00000481559 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
GRIA1-205ENST00000481559 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
GRIA1-205ENST00000481559 MYD88Q99836 296 aa13.14□□□□□ -0.31
GRIA1-205ENST00000481559 UTRNP46939 3433 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 GNPATO15228 680 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
GRIA1-205ENST00000481559 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
GRIA1-205ENST00000481559 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
GRIA1-205ENST00000481559 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
GRIA1-205ENST00000481559 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
GRIA1-205ENST00000481559 BEND3Q5T5X7 828 aa13.12□□□□□ -0.31
GRIA1-205ENST00000481559 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
GRIA1-205ENST00000481559 RREB1Q92766 1687 aa13.12□□□□□ -0.31
GRIA1-205ENST00000481559 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
GRIA1-205ENST00000481559 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
GRIA1-205ENST00000481559 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
GRIA1-205ENST00000481559 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
GRIA1-205ENST00000481559 GPTP24298 496 aa13.11□□□□□ -0.31
GRIA1-205ENST00000481559 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
GRIA1-205ENST00000481559 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
GRIA1-205ENST00000481559 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
GRIA1-205ENST00000481559 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
GRIA1-205ENST00000481559 PDGFDQ9GZP0 370 aaPredicted RBP13.1□□□□□ -0.31
GRIA1-205ENST00000481559 COL15A1P39059 1388 aa13.1□□□□□ -0.31
GRIA1-205ENST00000481559 ZNF831Q5JPB2 1677 aa13.1□□□□□ -0.31
GRIA1-205ENST00000481559 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 IGHDP01880 384 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
GRIA1-205ENST00000481559 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 USP44Q9H0E7 712 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 PLSCR1O15162 318 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
GRIA1-205ENST00000481559 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
GRIA1-205ENST00000481559 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
GRIA1-205ENST00000481559 ERBB4Q15303 1308 aa13.08□□□□□ -0.31
GRIA1-205ENST00000481559 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.31
GRIA1-205ENST00000481559 AFDNP55196 1824 aaKnown RBP13.08□□□□□ -0.31
GRIA1-205ENST00000481559 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.31
GRIA1-205ENST00000481559 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 NUP98P52948 1817 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 SIRT2Q8IXJ6 389 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
GRIA1-205ENST00000481559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.07□□□□□ -0.32
GRIA1-205ENST00000481559 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
GRIA1-205ENST00000481559 AK7Q96M32 723 aa13.07□□□□□ -0.32
GRIA1-205ENST00000481559 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
GRIA1-205ENST00000481559 N4BP2Q86UW6 1770 aaPredicted RBP13.06□□□□□ -0.32
GRIA1-205ENST00000481559 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
GRIA1-205ENST00000481559 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
GRIA1-205ENST00000481559 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
GRIA1-205ENST00000481559 KAZALD1Q96I82 304 aa13.06□□□□□ -0.32
GRIA1-205ENST00000481559 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
GRIA1-205ENST00000481559 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
GRIA1-205ENST00000481559 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
GRIA1-205ENST00000481559 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
GRIA1-205ENST00000481559 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
GRIA1-205ENST00000481559 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
GRIA1-205ENST00000481559 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
GRIA1-205ENST00000481559 GCKRQ14397 625 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
GRIA1-205ENST00000481559 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 SUCLG2Q96I99 432 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
GRIA1-205ENST00000481559 UBE3BQ7Z3V4 1068 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
GRIA1-205ENST00000481559 FAM89AQ96GI7 184 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
GRIA1-205ENST00000481559 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
GRIA1-205ENST00000481559 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
GRIA1-205ENST00000481559 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
GRIA1-205ENST00000481559 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
GRIA1-205ENST00000481559 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
GRIA1-205ENST00000481559 A0A087WZG4 1122 aa13.03□□□□□ -0.32
GRIA1-205ENST00000481559 MS4A1P11836 297 aa13.03□□□□□ -0.32
GRIA1-205ENST00000481559 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
GRIA1-205ENST00000481559 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms