RNA–Protein interactions for RNA: ENST00000481541.1

GGCX-208, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 600 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-208ENST00000481541 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
GGCX-208ENST00000481541 PBX2P40425 430 aa13.74□□□□□ -0.21
GGCX-208ENST00000481541 CABP4P57796 275 aa13.74□□□□□ -0.21
GGCX-208ENST00000481541 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
GGCX-208ENST00000481541 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
GGCX-208ENST00000481541 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
GGCX-208ENST00000481541 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
GGCX-208ENST00000481541 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
GGCX-208ENST00000481541 RNF123Q5XPI4 1314 aa13.73□□□□□ -0.21
GGCX-208ENST00000481541 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
GGCX-208ENST00000481541 NFATC2IPQ8NCF5 419 aa13.73□□□□□ -0.21
GGCX-208ENST00000481541 A0A0G2JS52 829 aa13.72□□□□□ -0.21
GGCX-208ENST00000481541 VAMP4O75379 141 aa13.72□□□□□ -0.21
GGCX-208ENST00000481541 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
GGCX-208ENST00000481541 MYT1Q01538 1121 aa13.72□□□□□ -0.21
GGCX-208ENST00000481541 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
GGCX-208ENST00000481541 MARCH10Q8NA82 808 aaPredicted RBP13.72□□□□□ -0.21
GGCX-208ENST00000481541 EIF4A1P60842 406 aaKnown RBP13.71□□□□□ -0.21
GGCX-208ENST00000481541 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
GGCX-208ENST00000481541 TSPYL6Q8N831 410 aa13.71□□□□□ -0.21
GGCX-208ENST00000481541 HOXB7P09629 217 aa13.7□□□□□ -0.22
GGCX-208ENST00000481541 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
GGCX-208ENST00000481541 RBM6P78332 1123 aaKnown RBP13.7□□□□□ -0.22
GGCX-208ENST00000481541 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.22
GGCX-208ENST00000481541 MFSD10Q14728 455 aa13.7□□□□□ -0.22
GGCX-208ENST00000481541 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
GGCX-208ENST00000481541 ZNF790Q6PG37 636 aa13.7□□□□□ -0.22
GGCX-208ENST00000481541 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
GGCX-208ENST00000481541 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
GGCX-208ENST00000481541 KCNQ3O43525 872 aa13.69□□□□□ -0.22
GGCX-208ENST00000481541 KRT24Q2M2I5 525 aa13.69□□□□□ -0.22
GGCX-208ENST00000481541 SEPT12Q8IYM1 358 aa13.69□□□□□ -0.22
GGCX-208ENST00000481541 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
GGCX-208ENST00000481541 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
GGCX-208ENST00000481541 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
GGCX-208ENST00000481541 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
GGCX-208ENST00000481541 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 BCL9O00512 1426 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 BCAR3O75815 825 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 NEFLP07196 543 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
GGCX-208ENST00000481541 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
GGCX-208ENST00000481541 ITGB4P16144 1822 aa13.67□□□□□ -0.22
GGCX-208ENST00000481541 BRPF1P55201 1214 aaPredicted RBP13.67□□□□□ -0.22
GGCX-208ENST00000481541 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
GGCX-208ENST00000481541 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
GGCX-208ENST00000481541 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
GGCX-208ENST00000481541 PIGBQ92521 554 aa13.67□□□□□ -0.22
GGCX-208ENST00000481541 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
GGCX-208ENST00000481541 GIGYF1O75420 1035 aaPredicted RBP13.66□□□□□ -0.22
GGCX-208ENST00000481541 PTGER2P43116 358 aa13.66□□□□□ -0.22
GGCX-208ENST00000481541 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
GGCX-208ENST00000481541 FMNL2Q96PY5 1086 aa13.66□□□□□ -0.22
GGCX-208ENST00000481541 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
GGCX-208ENST00000481541 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
GGCX-208ENST00000481541 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
GGCX-208ENST00000481541 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
GGCX-208ENST00000481541 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
GGCX-208ENST00000481541 RXRBP28702 533 aa13.64□□□□□ -0.23
GGCX-208ENST00000481541 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
GGCX-208ENST00000481541 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
GGCX-208ENST00000481541 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
GGCX-208ENST00000481541 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
GGCX-208ENST00000481541 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
GGCX-208ENST00000481541 ARHGAP33O14559 1287 aa13.63□□□□□ -0.23
GGCX-208ENST00000481541 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
GGCX-208ENST00000481541 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
GGCX-208ENST00000481541 RNF166Q96A37 237 aaPredicted RBP13.63□□□□□ -0.23
GGCX-208ENST00000481541 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
GGCX-208ENST00000481541 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
GGCX-208ENST00000481541 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
GGCX-208ENST00000481541 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
GGCX-208ENST00000481541 PLIN1O60240 522 aa13.62□□□□□ -0.23
GGCX-208ENST00000481541 ZKSCAN2Q63HK3 967 aa13.62□□□□□ -0.23
GGCX-208ENST00000481541 KRT27Q7Z3Y8 459 aa13.62□□□□□ -0.23
GGCX-208ENST00000481541 FRAT1Q92837 279 aaPredicted RBP13.62□□□□□ -0.23
GGCX-208ENST00000481541 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
GGCX-208ENST00000481541 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
GGCX-208ENST00000481541 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
GGCX-208ENST00000481541 C5P01031 1676 aa13.61□□□□□ -0.23
GGCX-208ENST00000481541 TCERG1O14776 1098 aaKnown RBP13.61□□□□□ -0.23
GGCX-208ENST00000481541 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
GGCX-208ENST00000481541 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
GGCX-208ENST00000481541 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
GGCX-208ENST00000481541 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
GGCX-208ENST00000481541 LAMB4A4D0S4 1761 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 RGS12O14924 1447 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
GGCX-208ENST00000481541 MS4A1P11836 297 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 EIF2S2P20042 333 aaKnown RBP13.6□□□□□ -0.23
GGCX-208ENST00000481541 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
GGCX-208ENST00000481541 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
GGCX-208ENST00000481541 GTF3C3Q9Y5Q9 886 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
GGCX-208ENST00000481541 PRAMEF22A3QJZ6 481 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms