RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 ANKRD13DQ6ZTN6 518 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 SUCLG2Q96I99 432 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 STAP2Q9UGK3 403 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 ERBB4Q15303 1308 aa22.6■■□□□ 1.21
MRPL28-209ENST00000481453 L1TD1Q5T7N2 865 aaKnown RBP22.6■■□□□ 1.21
MRPL28-209ENST00000481453 RHPN1Q8TCX5 695 aa22.59■■□□□ 1.21
MRPL28-209ENST00000481453 MYD88Q99836 296 aa22.59■■□□□ 1.21
MRPL28-209ENST00000481453 IL1RAPL2Q9NP60 686 aa22.59■■□□□ 1.21
MRPL28-209ENST00000481453 KIF2CQ99661 725 aa22.58■■□□□ 1.21
MRPL28-209ENST00000481453 NRAPQ86VF7 1730 aa22.58■■□□□ 1.21
MRPL28-209ENST00000481453 GCKRQ14397 625 aa22.58■■□□□ 1.2
MRPL28-209ENST00000481453 AFDNP55196 1824 aaKnown RBP22.58■■□□□ 1.2
MRPL28-209ENST00000481453 NEXNQ0ZGT2 675 aa22.57■■□□□ 1.2
MRPL28-209ENST00000481453 HDAC5Q9UQL6 1122 aa22.57■■□□□ 1.2
MRPL28-209ENST00000481453 ITGB4P16144 1822 aa22.57■■□□□ 1.2
MRPL28-209ENST00000481453 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
MRPL28-209ENST00000481453 PTCD1O75127 700 aaKnown RBP22.57■■□□□ 1.2
MRPL28-209ENST00000481453 KIF1BPQ96EK5 621 aa22.57■■□□□ 1.2
MRPL28-209ENST00000481453 BICC1Q9H694 974 aaKnown RBP22.57■■□□□ 1.2
MRPL28-209ENST00000481453 AOX1Q06278 1338 aa22.56■■□□□ 1.2
MRPL28-209ENST00000481453 DDIT3P35638 169 aa22.55■■□□□ 1.2
MRPL28-209ENST00000481453 TMOD3Q9NYL9 352 aa22.55■■□□□ 1.2
MRPL28-209ENST00000481453 PLBD2Q8NHP8 589 aa22.55■■□□□ 1.2
MRPL28-209ENST00000481453 LRP6O75581 1613 aa22.55■■□□□ 1.2
MRPL28-209ENST00000481453 TRAK2O60296 914 aa22.54■■□□□ 1.2
MRPL28-209ENST00000481453 A1BGP04217 495 aa22.54■■□□□ 1.2
MRPL28-209ENST00000481453 HSP90AB4PQ58FF6 505 aa22.54■■□□□ 1.2
MRPL28-209ENST00000481453 NUTM1Q86Y26 1132 aa22.54■■□□□ 1.2
MRPL28-209ENST00000481453 PIGBQ92521 554 aa22.54■■□□□ 1.2
MRPL28-209ENST00000481453 GZF1Q9H116 711 aaPredicted RBP22.54■■□□□ 1.2
MRPL28-209ENST00000481453 PA2G4Q9UQ80 394 aaKnown RBP22.53■■□□□ 1.2
MRPL28-209ENST00000481453 DDX11L8A8MPP1 907 aa22.53■■□□□ 1.2
MRPL28-209ENST00000481453 ASAP1Q9ULH1 1129 aa22.52■■□□□ 1.2
MRPL28-209ENST00000481453 GOLGA6L3A6NEY3 463 aa22.51■■□□□ 1.19
MRPL28-209ENST00000481453 EIF5BO60841 1220 aaKnown RBP22.51■■□□□ 1.19
MRPL28-209ENST00000481453 EPHA10Q5JZY3 1008 aa22.51■■□□□ 1.19
MRPL28-209ENST00000481453 TTLL7Q6ZT98 887 aa22.51■■□□□ 1.19
MRPL28-209ENST00000481453 USP26Q9BXU7 913 aa22.51■■□□□ 1.19
MRPL28-209ENST00000481453 CIZ1Q9ULV3 898 aaPredicted RBP22.51■■□□□ 1.19
MRPL28-209ENST00000481453 HSP90AA1P07900 732 aaKnown RBP22.51■■□□□ 1.19
MRPL28-209ENST00000481453 ADAMTS2O95450 1211 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 COL15A1P39059 1388 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 CASC1Q6TDU7 716 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 ATG3Q9NT62 314 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 ATP5J2-PTCD1G3V325 749 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 UNC5CLQ8IV45 518 aa22.5■■□□□ 1.19
MRPL28-209ENST00000481453 BCL9O00512 1426 aa22.49■■□□□ 1.19
MRPL28-209ENST00000481453 USP42Q9H9J4 1324 aaKnown RBP22.49■■□□□ 1.19
MRPL28-209ENST00000481453 ARXQ96QS3 562 aa22.49■■□□□ 1.19
MRPL28-209ENST00000481453 TJP1Q07157 1748 aa22.49■■□□□ 1.19
MRPL28-209ENST00000481453 K7ELQ4 463 aaPredicted RBP22.49■■□□□ 1.19
MRPL28-209ENST00000481453 CD2BP2O95400 341 aaKnown RBP22.49■■□□□ 1.19
MRPL28-209ENST00000481453 CASP7P55210 303 aa22.49■■□□□ 1.19
MRPL28-209ENST00000481453 RBM42Q9BTD8 480 aaKnown RBP22.49■■□□□ 1.19
MRPL28-209ENST00000481453 OS9Q13438 667 aaPredicted RBP22.48■■□□□ 1.19
MRPL28-209ENST00000481453 JARID2Q92833 1246 aaPredicted RBP22.48■■□□□ 1.19
MRPL28-209ENST00000481453 TNPO1Q92973 898 aaKnown RBP22.48■■□□□ 1.19
MRPL28-209ENST00000481453 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.47■■□□□ 1.19
MRPL28-209ENST00000481453 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
MRPL28-209ENST00000481453 FSD2A1L4K1 749 aa22.47■■□□□ 1.19
MRPL28-209ENST00000481453 EXOC5O00471 708 aa22.47■■□□□ 1.19
MRPL28-209ENST00000481453 VSIG10Q8N0Z9 540 aa22.47■■□□□ 1.19
MRPL28-209ENST00000481453 FAM43AQ8N2R8 423 aa22.47■■□□□ 1.19
MRPL28-209ENST00000481453 ERC2O15083 957 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 UBE3BQ7Z3V4 1068 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 ERC1Q8IUD2 1116 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.46■■□□□ 1.19
MRPL28-209ENST00000481453 SASH1O94885 1247 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 PIP4K2BP78356 416 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 DNAJC10Q8IXB1 793 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 FOXD4L1Q9NU39 408 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 DOT1LQ8TEK3 1739 aa22.46■■□□□ 1.19
MRPL28-209ENST00000481453 TRIM6-TRIM34B2RNG4 842 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 CHMLP26374 656 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 RAB3GAP1Q15042 981 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 RABL6Q3YEC7 729 aaPredicted RBP22.45■■□□□ 1.18
MRPL28-209ENST00000481453 GBP4Q96PP9 640 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 A0A087WZG4 1122 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 TOM1O60784 492 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 XRCC6P12956 609 aaKnown RBP eCLIP22.45■■□□□ 1.18
MRPL28-209ENST00000481453 RILPL2Q969X0 211 aa22.45■■□□□ 1.18
MRPL28-209ENST00000481453 ESYT1Q9BSJ8 1104 aa22.44■■□□□ 1.18
MRPL28-209ENST00000481453 AK9Q5TCS8 1911 aa22.44■■□□□ 1.18
MRPL28-209ENST00000481453 SLIT2O94813 1529 aa22.44■■□□□ 1.18
MRPL28-209ENST00000481453 REC8O95072 547 aa22.43■■□□□ 1.18
MRPL28-209ENST00000481453 RFX5P48382 616 aaPredicted RBP22.43■■□□□ 1.18
MRPL28-209ENST00000481453 CLASRPQ8N2M8 674 aaKnown RBP22.43■■□□□ 1.18
MRPL28-209ENST00000481453 KLHDC4Q8TBB5 520 aa22.43■■□□□ 1.18
MRPL28-209ENST00000481453 ZBTB3Q9H5J0 574 aa22.43■■□□□ 1.18
MRPL28-209ENST00000481453 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
MRPL28-209ENST00000481453 H7C1W4 665 aa22.43■■□□□ 1.18
MRPL28-209ENST00000481453 SLC4A9Q96Q91 983 aa22.43■■□□□ 1.18
MRPL28-209ENST00000481453 NUTM2BA6NNL0 878 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-209ENST00000481453 NUTM2EB1AL46 878 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-209ENST00000481453 NUTM2AQ8IVF1 878 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-209ENST00000481453 CDCA7Q9BWT1 371 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-209ENST00000481453 TEX13AQ9BXU3 409 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms