RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 BABAM1Q9NWV8 329 aa14.91□□□□□ -0.02
RAPGEF1-207ENST00000481260 ANKRD31Q8N7Z5 1873 aa14.91□□□□□ -0.02
RAPGEF1-207ENST00000481260 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF1-207ENST00000481260 FAM9BQ8IZU0 186 aa14.9□□□□□ -0.02
RAPGEF1-207ENST00000481260 C8orf58Q8NAV2 365 aa14.9□□□□□ -0.02
RAPGEF1-207ENST00000481260 TSR2Q969E8 191 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-207ENST00000481260 SETDB2Q96T68 719 aa14.9□□□□□ -0.02
RAPGEF1-207ENST00000481260 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-207ENST00000481260 GPTP24298 496 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 C2CD5Q86YS7 1000 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 TSPYL6Q8N831 410 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 ZNF784Q8NCA9 323 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 CHPF2Q9P2E5 772 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 NIP7Q9Y221 180 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 UBN2Q6ZU65 1347 aa14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 COL11A2P13942 1736 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-207ENST00000481260 GRIN3BO60391 1043 aa14.88□□□□□ -0.03
RAPGEF1-207ENST00000481260 NPM2Q86SE8 214 aaKnown RBP14.88□□□□□ -0.03
RAPGEF1-207ENST00000481260 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
RAPGEF1-207ENST00000481260 XAGE3Q8WTP9 111 aa14.88□□□□□ -0.03
RAPGEF1-207ENST00000481260 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
RAPGEF1-207ENST00000481260 AIMP1Q12904 312 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-207ENST00000481260 COPS6Q7L5N1 327 aa14.87□□□□□ -0.03
RAPGEF1-207ENST00000481260 SLC51AQ86UW1 340 aa14.87□□□□□ -0.03
RAPGEF1-207ENST00000481260 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
RAPGEF1-207ENST00000481260 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF1-207ENST00000481260 PIM2Q9P1W9 311 aa14.87□□□□□ -0.03
RAPGEF1-207ENST00000481260 ABCC12Q96J65 1359 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 CHD4Q14839 1912 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 PRELPP51888 382 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 DALRD3Q5D0E6 543 aaKnown RBP14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 HDGFL1Q5TGJ6 251 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 CLEC4GQ6UXB4 293 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 ARHGAP27Q6ZUM4 889 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 NBPF5PQ86XG9 351 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 NUTM1Q86Y26 1132 aa14.86□□□□□ -0.03
RAPGEF1-207ENST00000481260 TCERG1O14776 1098 aaKnown RBP14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 SUSD4Q5VX71 490 aa14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 KIF6Q6ZMV9 814 aa14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 C3orf67Q6ZVT6 689 aa14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 BRIP1Q9BX63 1249 aa14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 ERBB4Q15303 1308 aa14.85□□□□□ -0.03
RAPGEF1-207ENST00000481260 TNRC6CQ9HCJ0 1690 aaKnown RBP14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 GNAI1P63096 354 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 RASSF7Q02833 373 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 ERFEQ4G0M1 354 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 ZNF34Q8IZ26 560 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 SYNE4Q8N205 404 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 DDX21Q9NR30 783 aaKnown RBP eCLIP14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 ZNF652Q9Y2D9 606 aa14.84□□□□□ -0.03
RAPGEF1-207ENST00000481260 ATP10DQ9P241 1426 aa14.83□□□□□ -0.03
RAPGEF1-207ENST00000481260 NUP98P52948 1817 aa14.83□□□□□ -0.04
RAPGEF1-207ENST00000481260 H0YIN7 160 aa14.83□□□□□ -0.04
RAPGEF1-207ENST00000481260 CCDC27Q2M243 656 aa14.83□□□□□ -0.04
RAPGEF1-207ENST00000481260 ZNF622Q969S3 477 aaKnown RBP eCLIP14.83□□□□□ -0.04
RAPGEF1-207ENST00000481260 ADCY9O60503 1353 aa14.83□□□□□ -0.04
RAPGEF1-207ENST00000481260 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.04
RAPGEF1-207ENST00000481260 OLFM4Q6UX06 510 aa14.82□□□□□ -0.04
RAPGEF1-207ENST00000481260 GIGYF2Q6Y7W6 1299 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-207ENST00000481260 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-207ENST00000481260 PHAXQ9H814 394 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-207ENST00000481260 NPHP1O15259 732 aa14.81□□□□□ -0.04
RAPGEF1-207ENST00000481260 NTSR2O95665 410 aa14.81□□□□□ -0.04
RAPGEF1-207ENST00000481260 SRGNP10124 158 aa14.81□□□□□ -0.04
RAPGEF1-207ENST00000481260 ST5P78524 1137 aa14.81□□□□□ -0.04
RAPGEF1-207ENST00000481260 RGL2O15211 777 aa14.8□□□□□ -0.04
RAPGEF1-207ENST00000481260 HOXB7P09629 217 aa14.8□□□□□ -0.04
RAPGEF1-207ENST00000481260 PDE6BP35913 854 aa14.8□□□□□ -0.04
RAPGEF1-207ENST00000481260 TTLL6Q8N841 843 aa14.8□□□□□ -0.04
RAPGEF1-207ENST00000481260 FANCIQ9NVI1 1328 aa14.8□□□□□ -0.04
RAPGEF1-207ENST00000481260 ARFGEF1Q9Y6D6 1849 aa14.8□□□□□ -0.04
RAPGEF1-207ENST00000481260 ATP5J2-PTCD1G3V325 749 aa14.79□□□□□ -0.04
RAPGEF1-207ENST00000481260 NFKBIEO00221 500 aa14.79□□□□□ -0.04
RAPGEF1-207ENST00000481260 C21orf2O43822 256 aa14.79□□□□□ -0.04
RAPGEF1-207ENST00000481260 CALD1Q05682 793 aaKnown RBP14.79□□□□□ -0.04
RAPGEF1-207ENST00000481260 TPTE2Q6XPS3 522 aa14.79□□□□□ -0.04
RAPGEF1-207ENST00000481260 SLX4Q8IY92 1834 aa14.79□□□□□ -0.04
RAPGEF1-207ENST00000481260 KLRG2A4D1S0 409 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-207ENST00000481260 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
RAPGEF1-207ENST00000481260 PRPF40BQ6NWY9 871 aaKnown RBP14.78□□□□□ -0.04
RAPGEF1-207ENST00000481260 G2E3Q7L622 706 aa14.78□□□□□ -0.04
RAPGEF1-207ENST00000481260 NLRP10Q86W26 655 aa14.78□□□□□ -0.04
RAPGEF1-207ENST00000481260 DBF4Q9UBU7 674 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-207ENST00000481260 TCIRG1Q13488 830 aa14.77□□□□□ -0.05
RAPGEF1-207ENST00000481260 IL16Q14005 1332 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 ZNF521Q96K83 1311 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 HCLS1P14317 486 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 GTF2E1P29083 439 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 STYK1Q6J9G0 422 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 ANKRD13DQ6ZTN6 518 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 PLBD2Q8NHP8 589 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 C7orf43Q8WVR3 580 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 MASTLQ96GX5 879 aa14.76□□□□□ -0.05
RAPGEF1-207ENST00000481260 CACNA1SQ13698 1873 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms