RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 RTN1Q16799 776 aa8.95□□□□□ -0.98
UPF3A-207ENST00000481131 GNASQ5JWF2 1037 aa8.95□□□□□ -0.98
UPF3A-207ENST00000481131 KLRG1Q96E93 195 aa8.95□□□□□ -0.98
UPF3A-207ENST00000481131 UPP2O95045 317 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 MAPK1P28482 360 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 EIF1AXP47813 144 aaKnown RBP8.94□□□□□ -0.98
UPF3A-207ENST00000481131 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 KLK14Q9P0G3 267 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 DCTN4Q9UJW0 460 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
UPF3A-207ENST00000481131 ANKRD33BA6NCL7 494 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 FIGNL2A6NMB9 653 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 GTF2E1P29083 439 aaPredicted RBP8.93□□□□□ -0.98
UPF3A-207ENST00000481131 PHKA2P46019 1235 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 DGKZQ13574 1117 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 NPAS4Q8IUM7 802 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
UPF3A-207ENST00000481131 H3BM21 787 aa8.92□□□□□ -0.98
UPF3A-207ENST00000481131 FZD6O60353 706 aa8.92□□□□□ -0.98
UPF3A-207ENST00000481131 POU4F2Q12837 409 aa8.92□□□□□ -0.98
UPF3A-207ENST00000481131 NBPF10Q6P3W6 841 aaKnown RBP8.92□□□□□ -0.98
UPF3A-207ENST00000481131 CCDC87Q9NVE4 849 aa8.92□□□□□ -0.98
UPF3A-207ENST00000481131 BCS1LQ9Y276 419 aa8.92□□□□□ -0.98
UPF3A-207ENST00000481131 MAN1A2O60476 641 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 ERCC3P19447 782 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 RBM25P49756 843 aaKnown RBP8.91□□□□□ -0.98
UPF3A-207ENST00000481131 C11orf91Q3C1V1 193 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 PRICKLE2Q7Z3G6 844 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 ATCAYQ86WG3 371 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 SLC16A10Q8TF71 515 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 ASB16Q96NS5 453 aa8.91□□□□□ -0.98
UPF3A-207ENST00000481131 TTLL8A6PVC2 850 aa8.9□□□□□ -0.98
UPF3A-207ENST00000481131 BRD2P25440 801 aaKnown RBP8.9□□□□□ -0.98
UPF3A-207ENST00000481131 GMPRP36959 345 aa8.9□□□□□ -0.98
UPF3A-207ENST00000481131 RHOQP17081 205 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 ATP4AP20648 1035 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 LYSMD3Q7Z3D4 306 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 ABTB2Q8N961 1025 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 IFT43Q96FT9 208 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 ZDHHC3Q9NYG2 299 aa8.89□□□□□ -0.99
UPF3A-207ENST00000481131 RBM47A0AV96 593 aaKnown RBP8.88□□□□□ -0.99
UPF3A-207ENST00000481131 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
UPF3A-207ENST00000481131 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
UPF3A-207ENST00000481131 RGL4Q8IZJ4 473 aa8.88□□□□□ -0.99
UPF3A-207ENST00000481131 RHPN1Q8TCX5 695 aa8.88□□□□□ -0.99
UPF3A-207ENST00000481131 IRF7Q92985 503 aa8.88□□□□□ -0.99
UPF3A-207ENST00000481131 UNCXA6NJT0 531 aa8.87□□□□□ -0.99
UPF3A-207ENST00000481131 IGHA2P01877 340 aa8.87□□□□□ -0.99
UPF3A-207ENST00000481131 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
UPF3A-207ENST00000481131 ALKBH2Q6NS38 261 aa8.87□□□□□ -0.99
UPF3A-207ENST00000481131 ZNF280CQ8ND82 737 aa8.87□□□□□ -0.99
UPF3A-207ENST00000481131 BRPF3Q9ULD4 1205 aa8.87□□□□□ -0.99
UPF3A-207ENST00000481131 NDUFB5O43674 189 aa8.86□□□□□ -0.99
UPF3A-207ENST00000481131 PPFIA3O75145 1194 aa8.86□□□□□ -0.99
UPF3A-207ENST00000481131 TREML1Q86YW5 311 aa8.86□□□□□ -0.99
UPF3A-207ENST00000481131 HSH2DQ96JZ2 352 aa8.86□□□□□ -0.99
UPF3A-207ENST00000481131 MSX1P28360 303 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 ZAP70P43403 619 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 TAGLNQ01995 201 aaKnown RBP8.85□□□□□ -0.99
UPF3A-207ENST00000481131 PTSQ03393 145 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 AAMPQ13685 434 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 FBXO33Q7Z6M2 555 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
UPF3A-207ENST00000481131 SUSD3Q96L08 255 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 TIMMDC1Q9NPL8 285 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 DMGDHQ9UI17 866 aaKnown RBP8.85□□□□□ -0.99
UPF3A-207ENST00000481131 POLIQ9UNA4 740 aa8.85□□□□□ -0.99
UPF3A-207ENST00000481131 VSIG8P0DPA2 414 aa8.84□□□□□ -0.99
UPF3A-207ENST00000481131 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
UPF3A-207ENST00000481131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.84□□□□□ -0.99
UPF3A-207ENST00000481131 GJD3Q8N144 294 aa8.84□□□□□ -0.99
UPF3A-207ENST00000481131 EDEM1Q92611 657 aa8.84□□□□□ -0.99
UPF3A-207ENST00000481131 ZIC5Q96T25 663 aa8.84□□□□□ -0.99
UPF3A-207ENST00000481131 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
UPF3A-207ENST00000481131 BCL2L13Q9BXK5 485 aa8.84□□□□□ -0.99
UPF3A-207ENST00000481131 A0A1B0GTH6 734 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 TGFBR3LH3BV60 316 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 OPLAHO14841 1288 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 GPR182O15218 404 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 TREHO43280 583 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 MICAL2O94851 1124 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 PDGFAP04085 211 aa8.83□□□□□ -1
UPF3A-207ENST00000481131 ZNF16P17020 682 aaPredicted RBP8.83□□□□□ -1
UPF3A-207ENST00000481131 RANGAP1P46060 587 aaPredicted RBP8.83□□□□□ -1
UPF3A-207ENST00000481131 DNM1Q05193 864 aaKnown RBP8.83□□□□□ -1
UPF3A-207ENST00000481131 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
UPF3A-207ENST00000481131 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
UPF3A-207ENST00000481131 P4HBP07237 508 aaKnown RBP8.82□□□□□ -1
UPF3A-207ENST00000481131 MZF1P28698 734 aaPredicted RBP8.82□□□□□ -1
UPF3A-207ENST00000481131 DSC3Q14574 896 aa8.82□□□□□ -1
UPF3A-207ENST00000481131 IER5Q5VY09 327 aa8.82□□□□□ -1
UPF3A-207ENST00000481131 BICDL1Q6ZP65 573 aa8.82□□□□□ -1
UPF3A-207ENST00000481131 GIPC2Q8TF65 315 aa8.82□□□□□ -1
UPF3A-207ENST00000481131 CITED4Q96RK1 184 aa8.82□□□□□ -1
UPF3A-207ENST00000481131 FMR1Q06787 632 aaKnown RBP eCLIP8.81□□□□□ -1
UPF3A-207ENST00000481131 GPR161Q8N6U8 529 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms