RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
CBX3-206ENST00000481057 TNS4Q8IZW8 715 aa11.36□□□□□ -0.59
CBX3-206ENST00000481057 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
CBX3-206ENST00000481057 USTQ9Y2C2 406 aa11.36□□□□□ -0.59
CBX3-206ENST00000481057 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
CBX3-206ENST00000481057 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
CBX3-206ENST00000481057 FOXK2Q01167 660 aa11.35□□□□□ -0.59
CBX3-206ENST00000481057 SWI5Q1ZZU3 235 aa11.35□□□□□ -0.59
CBX3-206ENST00000481057 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
CBX3-206ENST00000481057 SCHIP1Q9P0W5 487 aaPredicted RBP11.35□□□□□ -0.59
CBX3-206ENST00000481057 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
CBX3-206ENST00000481057 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
CBX3-206ENST00000481057 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
CBX3-206ENST00000481057 USP3Q9Y6I4 520 aa11.34□□□□□ -0.59
CBX3-206ENST00000481057 KIAA0556O60303 1618 aa11.34□□□□□ -0.59
CBX3-206ENST00000481057 FRMPD1Q5SYB0 1578 aa11.33□□□□□ -0.6
CBX3-206ENST00000481057 PPARGC1BQ86YN6 1023 aaKnown RBP11.33□□□□□ -0.6
CBX3-206ENST00000481057 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
CBX3-206ENST00000481057 FIGNL2A6NMB9 653 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 SPATA31C2B4DYI2 1134 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 CDK2AP1O14519 115 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 LYSMD3Q7Z3D4 306 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 TSPAN10Q9H1Z9 355 aaPredicted RBP11.32□□□□□ -0.6
CBX3-206ENST00000481057 SIGLEC1Q9BZZ2 1709 aa11.32□□□□□ -0.6
CBX3-206ENST00000481057 MAN1A2O60476 641 aa11.31□□□□□ -0.6
CBX3-206ENST00000481057 LGR5O75473 907 aa11.31□□□□□ -0.6
CBX3-206ENST00000481057 TMEM214Q6NUQ4 689 aaKnown RBP11.31□□□□□ -0.6
CBX3-206ENST00000481057 PRICKLE2Q7Z3G6 844 aa11.31□□□□□ -0.6
CBX3-206ENST00000481057 ZNF295-AS1Q8N0V1 137 aa11.31□□□□□ -0.6
CBX3-206ENST00000481057 CLP1Q92989 425 aaKnown RBP11.31□□□□□ -0.6
CBX3-206ENST00000481057 WRNQ14191 1432 aaPredicted RBP eCLIP11.3□□□□□ -0.6
CBX3-206ENST00000481057 CARNS1A5YM72 827 aa11.3□□□□□ -0.6
CBX3-206ENST00000481057 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
CBX3-206ENST00000481057 SNRPBP14678 240 aaKnown RBP11.3□□□□□ -0.6
CBX3-206ENST00000481057 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
CBX3-206ENST00000481057 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.65e-7■□□□□ 10.5
CBX3-206ENST00000481057 TBCELQ5QJ74 424 aa11.3□□□□□ -0.6
CBX3-206ENST00000481057 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
CBX3-206ENST00000481057 SLAIN2Q9P270 581 aa11.3□□□□□ -0.6
CBX3-206ENST00000481057 AKNAQ7Z591 1439 aa11.29□□□□□ -0.6
CBX3-206ENST00000481057 POTECB2RU33 542 aa11.29□□□□□ -0.6
CBX3-206ENST00000481057 GNASQ5JWF2 1037 aa11.29□□□□□ -0.6
CBX3-206ENST00000481057 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
CBX3-206ENST00000481057 C21orf2O43822 256 aa11.28□□□□□ -0.6
CBX3-206ENST00000481057 WEE1P30291 646 aa11.28□□□□□ -0.6
CBX3-206ENST00000481057 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
CBX3-206ENST00000481057 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
CBX3-206ENST00000481057 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
CBX3-206ENST00000481057 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 PRMT3O60678 531 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 RHOQP17081 205 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 IGFBP4P22692 258 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 POU4F2Q12837 409 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 OCLNQ16625 522 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
CBX3-206ENST00000481057 SCG3Q8WXD2 468 aaKnown RBP11.27□□□□□ -0.61
CBX3-206ENST00000481057 NIFKQ9BYG3 293 aaKnown RBP11.27□□□□□ -0.61
CBX3-206ENST00000481057 PSMA6P60900 246 aaKnown RBP11.26□□□□□ -0.61
CBX3-206ENST00000481057 PDE4CQ08493 712 aa11.26□□□□□ -0.61
CBX3-206ENST00000481057 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
CBX3-206ENST00000481057 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
CBX3-206ENST00000481057 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
CBX3-206ENST00000481057 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
CBX3-206ENST00000481057 ATAD2Q6PL18 1390 aa11.26□□□□□ -0.61
CBX3-206ENST00000481057 CAMSAP1Q5T5Y3 1602 aa11.25□□□□□ -0.61
CBX3-206ENST00000481057 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
CBX3-206ENST00000481057 TEAD4Q15561 434 aa11.25□□□□□ -0.61
CBX3-206ENST00000481057 ZDHHC1Q8WTX9 485 aa11.25□□□□□ -0.61
CBX3-206ENST00000481057 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
CBX3-206ENST00000481057 ATP2B4P23634 1241 aa11.24□□□□□ -0.61
CBX3-206ENST00000481057 PLA2G4AP47712 749 aa11.24□□□□□ -0.61
CBX3-206ENST00000481057 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
CBX3-206ENST00000481057 NEO1Q92859 1461 aa11.24□□□□□ -0.61
CBX3-206ENST00000481057 SETBP1Q9Y6X0 1596 aa11.24□□□□□ -0.61
CBX3-206ENST00000481057 PHKA2P46019 1235 aa11.23□□□□□ -0.61
CBX3-206ENST00000481057 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
CBX3-206ENST00000481057 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
CBX3-206ENST00000481057 EML1O00423 815 aa11.22□□□□□ -0.61
CBX3-206ENST00000481057 FOXO3O43524 673 aa11.22□□□□□ -0.61
CBX3-206ENST00000481057 SERTM1A2A2V5 107 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 NOS2P35228 1153 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.61
CBX3-206ENST00000481057 PTSQ03393 145 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.61
CBX3-206ENST00000481057 SH3PXD2AQ5TCZ1 1133 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 C2orf49Q9BVC5 232 aaPredicted RBP11.21□□□□□ -0.61
CBX3-206ENST00000481057 TIMMDC1Q9NPL8 285 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
CBX3-206ENST00000481057 SSFA2P28290 1259 aa11.2□□□□□ -0.62
CBX3-206ENST00000481057 CPS1P31327 1500 aa11.19□□□□□ -0.62
CBX3-206ENST00000481057 SLC35F4A4IF30 521 aa11.19□□□□□ -0.62
CBX3-206ENST00000481057 HOMEZQ8IX15 550 aa11.19□□□□□ -0.62
CBX3-206ENST00000481057 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
CBX3-206ENST00000481057 ZNF232Q9UNY5 417 aa11.19□□□□□ -0.62
CBX3-206ENST00000481057 DYRK1BQ9Y463 629 aa11.19□□□□□ -0.62
CBX3-206ENST00000481057 TRAPPC8Q9Y2L5 1435 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms