RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SSFA2P28290 1259 aa9.97□□□□□ -0.81
CALD1-219ENST00000480638 LRRC69Q6ZNQ3 347 aa9.97□□□□□ -0.81
CALD1-219ENST00000480638 CAPN12Q6ZSI9 719 aa9.97□□□□□ -0.81
CALD1-219ENST00000480638 HSH2DQ96JZ2 352 aa9.97□□□□□ -0.81
CALD1-219ENST00000480638 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
CALD1-219ENST00000480638 ZCCHC2Q9C0B9 1178 aaKnown RBP9.97□□□□□ -0.81
CALD1-219ENST00000480638 GAS6Q14393 721 aa9.96□□□□□ -0.82
CALD1-219ENST00000480638 SAMD5Q5TGI4 173 aa9.96□□□□□ -0.82
CALD1-219ENST00000480638 MYO19Q96H55 970 aa9.96□□□□□ -0.82
CALD1-219ENST00000480638 SUSD3Q96L08 255 aa9.96□□□□□ -0.82
CALD1-219ENST00000480638 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.82
CALD1-219ENST00000480638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.96□□□□□ -0.82
CALD1-219ENST00000480638 NDFIP2Q9NV92 336 aa9.96□□□□□ -0.82
CALD1-219ENST00000480638 ATXN7O15265 892 aaPredicted RBP9.95□□□□□ -0.82
CALD1-219ENST00000480638 KRT76Q01546 638 aa9.95□□□□□ -0.82
CALD1-219ENST00000480638 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
CALD1-219ENST00000480638 PHLDB3Q6NSJ2 640 aa9.95□□□□□ -0.82
CALD1-219ENST00000480638 ABHD17AQ96GS6 310 aa9.95□□□□□ -0.82
CALD1-219ENST00000480638 NEUROD4Q9HD90 331 aa9.95□□□□□ -0.82
CALD1-219ENST00000480638 PCDHGC4Q9Y5F7 938 aa9.95□□□□□ -0.82
CALD1-219ENST00000480638 BNIP3LO60238 219 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 FAM157BP0CG42 384 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 SCNN1AP37088 669 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 PDE4CQ08493 712 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 HIF1AQ16665 826 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 ZNF280CQ8ND82 737 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 CFHR5Q9BXR6 569 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 ANKIB1Q9P2G1 1089 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 LRFN2Q9ULH4 789 aa9.94□□□□□ -0.82
CALD1-219ENST00000480638 ATXN7L1Q9ULK2 861 aaPredicted RBP9.94□□□□□ -0.82
CALD1-219ENST00000480638 DCDC2BA2VCK2 349 aa9.93□□□□□ -0.82
CALD1-219ENST00000480638 DGKZQ13574 1117 aa9.93□□□□□ -0.82
CALD1-219ENST00000480638 NAA30Q147X3 362 aaPredicted RBP9.93□□□□□ -0.82
CALD1-219ENST00000480638 COX20Q5RI15 118 aa9.93□□□□□ -0.82
CALD1-219ENST00000480638 SAP130Q9H0E3 1048 aa9.93□□□□□ -0.82
CALD1-219ENST00000480638 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
CALD1-219ENST00000480638 PHF24Q9UPV7 400 aa9.93□□□□□ -0.82
CALD1-219ENST00000480638 WIPF1O43516 503 aa9.92□□□□□ -0.82
CALD1-219ENST00000480638 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
CALD1-219ENST00000480638 C16orf46Q6P387 395 aa9.92□□□□□ -0.82
CALD1-219ENST00000480638 SEPT3Q9UH03 358 aa9.92□□□□□ -0.82
CALD1-219ENST00000480638 BCS1LQ9Y276 419 aa9.92□□□□□ -0.82
CALD1-219ENST00000480638 TGFBR3LH3BV60 316 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 KHNYNO15037 678 aaKnown RBP9.91□□□□□ -0.82
CALD1-219ENST00000480638 MAPTP10636 758 aaKnown RBP9.91□□□□□ -0.82
CALD1-219ENST00000480638 TNP2Q05952 138 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 C11orf91Q3C1V1 193 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 IER5Q5VY09 327 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 CNTNAP3BQ96NU0 1288 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 MBIPQ9NS73 344 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 HCN2Q9UL51 889 aa9.91□□□□□ -0.82
CALD1-219ENST00000480638 EFSO43281 561 aa9.9□□□□□ -0.82
CALD1-219ENST00000480638 FGFR3P22607 806 aa9.9□□□□□ -0.82
CALD1-219ENST00000480638 TYRO3Q06418 890 aa9.9□□□□□ -0.82
CALD1-219ENST00000480638 MX2P20592 715 aa9.89□□□□□ -0.83
CALD1-219ENST00000480638 BTLAQ7Z6A9 289 aa9.89□□□□□ -0.83
CALD1-219ENST00000480638 TNFRSF10BO14763 440 aa9.88□□□□□ -0.83
CALD1-219ENST00000480638 CEP63Q96MT8 703 aa9.88□□□□□ -0.83
CALD1-219ENST00000480638 DMGDHQ9UI17 866 aaKnown RBP9.88□□□□□ -0.83
CALD1-219ENST00000480638 CD33P20138 364 aa9.87□□□□□ -0.83
CALD1-219ENST00000480638 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
CALD1-219ENST00000480638 BRD7Q9NPI1 651 aa9.87□□□□□ -0.83
CALD1-219ENST00000480638 STRN4Q9NRL3 753 aa9.87□□□□□ -0.83
CALD1-219ENST00000480638 CTBSQ01459 385 aa9.86□□□□□ -0.83
CALD1-219ENST00000480638 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
CALD1-219ENST00000480638 IFT43Q96FT9 208 aa9.86□□□□□ -0.83
CALD1-219ENST00000480638 IGF1RP08069 1367 aa9.86□□□□□ -0.83
CALD1-219ENST00000480638 BRD2P25440 801 aaKnown RBP9.85□□□□□ -0.83
CALD1-219ENST00000480638 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
CALD1-219ENST00000480638 ETFBKMTQ8IXQ9 262 aa9.85□□□□□ -0.83
CALD1-219ENST00000480638 HELQQ8TDG4 1101 aa9.85□□□□□ -0.83
CALD1-219ENST00000480638 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
CALD1-219ENST00000480638 MARK1Q9P0L2 795 aa9.85□□□□□ -0.83
CALD1-219ENST00000480638 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
CALD1-219ENST00000480638 C2CD2LO14523 706 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 MICAL2O94851 1124 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 BMP4P12644 408 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 IDH3AP50213 366 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 KCNQ4P56696 695 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 SFSWAPQ12872 951 aaKnown RBP9.84□□□□□ -0.83
CALD1-219ENST00000480638 FAM26DQ5JW98 314 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 TREML1Q86YW5 311 aa9.84□□□□□ -0.83
CALD1-219ENST00000480638 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
CALD1-219ENST00000480638 SLURP2P0DP57 97 aa9.83□□□□□ -0.84
CALD1-219ENST00000480638 MAP2K3P46734 347 aa9.83□□□□□ -0.84
CALD1-219ENST00000480638 STIM2Q9P246 746 aa9.83□□□□□ -0.84
CALD1-219ENST00000480638 DNMT3AQ9Y6K1 912 aaPredicted RBP9.83□□□□□ -0.84
CALD1-219ENST00000480638 BRD1O95696 1058 aa9.82□□□□□ -0.84
CALD1-219ENST00000480638 INPP5BP32019 993 aa9.82□□□□□ -0.84
CALD1-219ENST00000480638 ARSDP51689 593 aa9.82□□□□□ -0.84
CALD1-219ENST00000480638 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
CALD1-219ENST00000480638 KCNH4Q9UQ05 1017 aa9.82□□□□□ -0.84
CALD1-219ENST00000480638 GRNP28799 593 aaKnown RBP9.81□□□□□ -0.84
CALD1-219ENST00000480638 ARID4AP29374 1257 aaPredicted RBP9.81□□□□□ -0.84
CALD1-219ENST00000480638 GRIN2CQ14957 1233 aa9.81□□□□□ -0.84
CALD1-219ENST00000480638 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
CALD1-219ENST00000480638 ABTB2Q8N961 1025 aa9.81□□□□□ -0.84
CALD1-219ENST00000480638 ABL1P00519 1130 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms