RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 RIPK4P57078 832 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 WDR43Q15061 677 aaKnown RBP eCLIP10.63□□□□□ -0.71
CTPS1-209ENST00000480420 PRR5LQ6MZQ0 368 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 DNAJC5GQ8N7S2 189 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 NECTIN2Q92692 538 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 NMRK2Q9NPI5 230 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 SBF1O95248 1867 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 ANKRD31Q8N7Z5 1873 aa10.63□□□□□ -0.71
CTPS1-209ENST00000480420 NBPF26B4DH59 902 aa10.62□□□□□ -0.71
CTPS1-209ENST00000480420 C21orf2O43822 256 aa10.62□□□□□ -0.71
CTPS1-209ENST00000480420 EIF2S2P20042 333 aaKnown RBP10.62□□□□□ -0.71
CTPS1-209ENST00000480420 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
CTPS1-209ENST00000480420 NBPF15Q8N660 670 aa10.62□□□□□ -0.71
CTPS1-209ENST00000480420 PNISRQ8TF01 805 aaKnown RBP10.62□□□□□ -0.71
CTPS1-209ENST00000480420 TSPYL4Q9UJ04 414 aa10.62□□□□□ -0.71
CTPS1-209ENST00000480420 NIP7Q9Y221 180 aaKnown RBP eCLIP10.62□□□□□ -0.71
CTPS1-209ENST00000480420 BCORQ6W2J9 1755 aa10.62□□□□□ -0.71
CTPS1-209ENST00000480420 DLEC1Q9Y238 1755 aa10.62□□□□□ -0.71
CTPS1-209ENST00000480420 NRXN2Q9P2S2 1712 aa10.61□□□□□ -0.71
CTPS1-209ENST00000480420 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
CTPS1-209ENST00000480420 PLEKHF1Q96S99 279 aa10.61□□□□□ -0.71
CTPS1-209ENST00000480420 BRIP1Q9BX63 1249 aa10.61□□□□□ -0.71
CTPS1-209ENST00000480420 RRAGCQ9HB90 399 aa10.61□□□□□ -0.71
CTPS1-209ENST00000480420 LAMB4A4D0S4 1761 aa10.61□□□□□ -0.71
CTPS1-209ENST00000480420 KDM2BQ8NHM5 1336 aa10.6□□□□□ -0.71
CTPS1-209ENST00000480420 MYBBP1AQ9BQG0 1328 aaKnown RBP10.6□□□□□ -0.71
CTPS1-209ENST00000480420 PCNTO95613 3336 aa10.6□□□□□ -0.71
CTPS1-209ENST00000480420 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
CTPS1-209ENST00000480420 COL13A1Q5TAT6 717 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-209ENST00000480420 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
CTPS1-209ENST00000480420 COL11A2P13942 1736 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-209ENST00000480420 NUP98P52948 1817 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 CAPN15O75808 1086 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 TOMM70O94826 608 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 LMNB1P20700 586 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 GPTP24298 496 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
CTPS1-209ENST00000480420 HLFQ16534 295 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 TPTE2Q6XPS3 522 aa10.59□□□□□ -0.71
CTPS1-209ENST00000480420 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 ANXA1P04083 346 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
CTPS1-209ENST00000480420 TMPOP42166 694 aaKnown RBP10.58□□□□□ -0.72
CTPS1-209ENST00000480420 LMOD3Q0VAK6 560 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 TTLL7Q6ZT98 887 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 CNKSR1Q969H4 720 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
CTPS1-209ENST00000480420 TCERG1O14776 1098 aaKnown RBP10.57□□□□□ -0.72
CTPS1-209ENST00000480420 HTRA3P83110 453 aa10.57□□□□□ -0.72
CTPS1-209ENST00000480420 AIMP1Q12904 312 aaKnown RBP10.57□□□□□ -0.72
CTPS1-209ENST00000480420 ERFEQ4G0M1 354 aa10.57□□□□□ -0.72
CTPS1-209ENST00000480420 PRPF40BQ6NWY9 871 aaKnown RBP10.57□□□□□ -0.72
CTPS1-209ENST00000480420 CLEC4GQ6UXB4 293 aa10.57□□□□□ -0.72
CTPS1-209ENST00000480420 MASTLQ96GX5 879 aa10.57□□□□□ -0.72
CTPS1-209ENST00000480420 PDZRN3Q9UPQ7 1066 aa10.57□□□□□ -0.72
CTPS1-209ENST00000480420 SRGNP10124 158 aa10.56□□□□□ -0.72
CTPS1-209ENST00000480420 RUNDC1Q96C34 613 aa10.56□□□□□ -0.72
CTPS1-209ENST00000480420 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
CTPS1-209ENST00000480420 ADAMTS8Q9UP79 889 aa10.56□□□□□ -0.72
CTPS1-209ENST00000480420 NFKBIEO00221 500 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 PRELPP51888 382 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 STYK1Q6J9G0 422 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 JMYQ8N9B5 988 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 RPGRQ92834 1020 aaKnown RBP10.55□□□□□ -0.72
CTPS1-209ENST00000480420 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 MAP3K15Q6ZN16 1313 aa10.55□□□□□ -0.72
CTPS1-209ENST00000480420 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
CTPS1-209ENST00000480420 NPR1P16066 1061 aa10.54□□□□□ -0.72
CTPS1-209ENST00000480420 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
CTPS1-209ENST00000480420 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
CTPS1-209ENST00000480420 NYXQ9GZU5 481 aa10.54□□□□□ -0.72
CTPS1-209ENST00000480420 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
CTPS1-209ENST00000480420 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
CTPS1-209ENST00000480420 GLTPD2A6NH11 291 aa10.53□□□□□ -0.72
CTPS1-209ENST00000480420 VEGFAP15692 232 aaPredicted RBP10.53□□□□□ -0.72
CTPS1-209ENST00000480420 PROSER3Q2NL68 480 aa10.53□□□□□ -0.72
CTPS1-209ENST00000480420 SOGA3Q5TF21 947 aa10.53□□□□□ -0.72
CTPS1-209ENST00000480420 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
CTPS1-209ENST00000480420 TNS4Q8IZW8 715 aa10.53□□□□□ -0.72
CTPS1-209ENST00000480420 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
CTPS1-209ENST00000480420 PRKRIP1Q9H875 184 aaPredicted RBP10.53□□□□□ -0.72
CTPS1-209ENST00000480420 ZNF277Q9NRM2 450 aaPredicted RBP10.53□□□□□ -0.72
CTPS1-209ENST00000480420 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.72
CTPS1-209ENST00000480420 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
CTPS1-209ENST00000480420 ALDH1B1P30837 517 aa10.52□□□□□ -0.73
CTPS1-209ENST00000480420 CCDC93Q567U6 631 aa10.52□□□□□ -0.73
CTPS1-209ENST00000480420 COPS6Q7L5N1 327 aa10.52□□□□□ -0.73
CTPS1-209ENST00000480420 PPP1R42Q7Z4L9 355 aa10.52□□□□□ -0.73
CTPS1-209ENST00000480420 XAGE3Q8WTP9 111 aa10.52□□□□□ -0.73
CTPS1-209ENST00000480420 ELL2O00472 640 aaPredicted RBP10.51□□□□□ -0.73
CTPS1-209ENST00000480420 APAF1O14727 1248 aa10.51□□□□□ -0.73
CTPS1-209ENST00000480420 DDNO94850 711 aaPredicted RBP10.51□□□□□ -0.73
CTPS1-209ENST00000480420 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
CTPS1-209ENST00000480420 TMX4Q9H1E5 349 aaPredicted RBP10.51□□□□□ -0.73
CTPS1-209ENST00000480420 TRIM35Q9UPQ4 493 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms