RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 RGL2O15211 777 aa27.65■■■□□ 2.02
CLIC3-202ENST00000480181 SNRPA1P09661 255 aaKnown RBP27.65■■■□□ 2.02
CLIC3-202ENST00000480181 SRGNP10124 158 aa27.64■■■□□ 2.02
CLIC3-202ENST00000480181 ZNF219Q9P2Y4 722 aaPredicted RBP27.64■■■□□ 2.02
CLIC3-202ENST00000480181 FER1L6Q2WGJ9 1857 aa27.63■■■□□ 2.01
CLIC3-202ENST00000480181 DICER1Q9UPY3 1922 aaKnown RBP27.63■■■□□ 2.01
CLIC3-202ENST00000480181 HTATSF1O43719 755 aaKnown RBP27.62■■■□□ 2.01
CLIC3-202ENST00000480181 PRPF40BQ6NWY9 871 aaKnown RBP27.62■■■□□ 2.01
CLIC3-202ENST00000480181 NBPF5PQ86XG9 351 aaPredicted RBP27.62■■■□□ 2.01
CLIC3-202ENST00000480181 CCDC24Q8N4L8 307 aa27.62■■■□□ 2.01
CLIC3-202ENST00000480181 KCNQ3O43525 872 aa27.61■■■□□ 2.01
CLIC3-202ENST00000480181 U2AF1L5P0DN76 240 aaPredicted RBP27.61■■■□□ 2.01
CLIC3-202ENST00000480181 U2AF1Q01081 240 aaKnown RBP eCLIP27.61■■■□□ 2.01
CLIC3-202ENST00000480181 USP16Q9Y5T5 823 aa27.61■■■□□ 2.01
CLIC3-202ENST00000480181 COL11A2P13942 1736 aaPredicted RBP27.6■■■□□ 2.01
CLIC3-202ENST00000480181 BCORQ6W2J9 1755 aa27.6■■■□□ 2.01
CLIC3-202ENST00000480181 POTECB2RU33 542 aa27.59■■■□□ 2.01
CLIC3-202ENST00000480181 TPTE2Q6XPS3 522 aa27.59■■■□□ 2.01
CLIC3-202ENST00000480181 PCNTO95613 3336 aa27.57■■■□□ 2
CLIC3-202ENST00000480181 IQCA1LA6NCM1 817 aa27.57■■■□□ 2
CLIC3-202ENST00000480181 NPR1P16066 1061 aa27.57■■■□□ 2
CLIC3-202ENST00000480181 CHADLQ6NUI6 762 aa27.57■■■□□ 2
CLIC3-202ENST00000480181 CCDC93Q567U6 631 aa27.56■■■□□ 2
CLIC3-202ENST00000480181 COL13A1Q5TAT6 717 aaPredicted RBP27.56■■■□□ 2
CLIC3-202ENST00000480181 ARFGEF2Q9Y6D5 1785 aa27.55■■■□□ 2
CLIC3-202ENST00000480181 NEFMP07197 916 aa27.55■■■□□ 2
CLIC3-202ENST00000480181 MCM10Q7L590 875 aa27.55■■■□□ 2
CLIC3-202ENST00000480181 SLX4Q8IY92 1834 aa27.55■■■□□ 2
CLIC3-202ENST00000480181 PPP2R1AP30153 589 aa27.54■■■□□ 2
CLIC3-202ENST00000480181 KLRG2A4D1S0 409 aaPredicted RBP27.53■■■□□ 2
CLIC3-202ENST00000480181 TAF7Q15545 349 aaPredicted RBP27.53■■■□□ 2
CLIC3-202ENST00000480181 CREBZFQ9NS37 354 aa27.53■■■□□ 2
CLIC3-202ENST00000480181 NIP7Q9Y221 180 aaKnown RBP eCLIP27.53■■■□□ 2
CLIC3-202ENST00000480181 DDNO94850 711 aaPredicted RBP27.52■■■□□ 2
CLIC3-202ENST00000480181 PIP4K2AP48426 406 aaPredicted RBP27.52■■■□□ 2
CLIC3-202ENST00000480181 RTKN2Q8IZC4 609 aa27.52■■■□□ 2
CLIC3-202ENST00000480181 TNS4Q8IZW8 715 aa27.52■■■□□ 2
CLIC3-202ENST00000480181 ALDH1B1P30837 517 aa27.51■■□□□ 1.99
CLIC3-202ENST00000480181 C7orf43Q8WVR3 580 aa27.51■■□□□ 1.99
CLIC3-202ENST00000480181 PRAMEF22A3QJZ6 481 aa27.5■■□□□ 1.99
CLIC3-202ENST00000480181 HSPA1AP0DMV8 641 aaKnown RBP27.5■■□□□ 1.99
CLIC3-202ENST00000480181 HSPA1BP0DMV9 641 aaKnown RBP27.5■■□□□ 1.99
CLIC3-202ENST00000480181 GTF2E1P29083 439 aaPredicted RBP27.5■■□□□ 1.99
CLIC3-202ENST00000480181 FKBP4Q02790 459 aaKnown RBP eCLIP27.5■■□□□ 1.99
CLIC3-202ENST00000480181 PNISRQ8TF01 805 aaKnown RBP27.5■■□□□ 1.99
CLIC3-202ENST00000480181 L3MBTL3Q96JM7 780 aaPredicted RBP27.5■■□□□ 1.99
CLIC3-202ENST00000480181 CACNA1SQ13698 1873 aa27.49■■□□□ 1.99
CLIC3-202ENST00000480181 LDHDQ86WU2 507 aa27.49■■□□□ 1.99
CLIC3-202ENST00000480181 NBPF26B4DH59 902 aa27.48■■□□□ 1.99
CLIC3-202ENST00000480181 NBPF10Q6P3W6 841 aaKnown RBP27.48■■□□□ 1.99
CLIC3-202ENST00000480181 NBPF15Q8N660 670 aa27.48■■□□□ 1.99
CLIC3-202ENST00000480181 NYXQ9GZU5 481 aa27.48■■□□□ 1.99
CLIC3-202ENST00000480181 SCN4AP35499 1836 aa27.46■■□□□ 1.99
CLIC3-202ENST00000480181 DCTN1Q14203 1278 aa27.46■■□□□ 1.99
CLIC3-202ENST00000480181 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
CLIC3-202ENST00000480181 TAF1DQ9H5J8 278 aaPredicted RBP27.44■■□□□ 1.98
CLIC3-202ENST00000480181 CC2D2BQ6DHV5 1058 aa27.43■■□□□ 1.98
CLIC3-202ENST00000480181 PNNQ9H307 717 aaKnown RBP27.43■■□□□ 1.98
CLIC3-202ENST00000480181 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
CLIC3-202ENST00000480181 GRIPAP1Q4V328 841 aa27.42■■□□□ 1.98
CLIC3-202ENST00000480181 ZNF277Q9NRM2 450 aaPredicted RBP27.42■■□□□ 1.98
CLIC3-202ENST00000480181 HACL1Q9UJ83 578 aa27.42■■□□□ 1.98
CLIC3-202ENST00000480181 KIF6Q6ZMV9 814 aa27.41■■□□□ 1.98
CLIC3-202ENST00000480181 PNMA8AQ86V59 439 aaPredicted RBP27.41■■□□□ 1.98
CLIC3-202ENST00000480181 POTEIP0CG38 1075 aa27.4■■□□□ 1.98
CLIC3-202ENST00000480181 POTEJP0CG39 1038 aa27.4■■□□□ 1.98
CLIC3-202ENST00000480181 IARSP41252 1262 aaKnown RBP27.4■■□□□ 1.98
CLIC3-202ENST00000480181 HLFQ16534 295 aa27.4■■□□□ 1.98
CLIC3-202ENST00000480181 SYNE4Q8N205 404 aa27.39■■□□□ 1.98
CLIC3-202ENST00000480181 JDP2Q8WYK2 163 aa27.39■■□□□ 1.98
CLIC3-202ENST00000480181 PSMD1Q99460 953 aa27.39■■□□□ 1.98
CLIC3-202ENST00000480181 MKRN1Q9UHC7 482 aaKnown RBP27.39■■□□□ 1.98
CLIC3-202ENST00000480181 LAMB4A4D0S4 1761 aa27.39■■□□□ 1.98
CLIC3-202ENST00000480181 PASKQ96RG2 1323 aa27.39■■□□□ 1.97
CLIC3-202ENST00000480181 CRY2Q49AN0 593 aa27.38■■□□□ 1.97
CLIC3-202ENST00000480181 MIS18AQ9NYP9 233 aa27.38■■□□□ 1.97
CLIC3-202ENST00000480181 MAP3K15Q6ZN16 1313 aa27.38■■□□□ 1.97
CLIC3-202ENST00000480181 CNTNAP1P78357 1384 aa27.37■■□□□ 1.97
CLIC3-202ENST00000480181 FZD9O00144 591 aa27.37■■□□□ 1.97
CLIC3-202ENST00000480181 EAPPQ56P03 285 aaPredicted RBP27.37■■□□□ 1.97
CLIC3-202ENST00000480181 GPC2Q8N158 579 aa27.37■■□□□ 1.97
CLIC3-202ENST00000480181 CLEC11AQ9Y240 323 aa27.37■■□□□ 1.97
CLIC3-202ENST00000480181 IBTKQ9P2D0 1353 aaPredicted RBP27.36■■□□□ 1.97
CLIC3-202ENST00000480181 TMEM88BA6NKF7 163 aa27.36■■□□□ 1.97
CLIC3-202ENST00000480181 CAPN15O75808 1086 aa27.36■■□□□ 1.97
CLIC3-202ENST00000480181 EPHX2P34913 555 aa27.36■■□□□ 1.97
CLIC3-202ENST00000480181 NGEFQ8N5V2 710 aa27.36■■□□□ 1.97
CLIC3-202ENST00000480181 RPGRQ92834 1020 aaKnown RBP27.36■■□□□ 1.97
CLIC3-202ENST00000480181 ZNF541Q9H0D2 1346 aa27.36■■□□□ 1.97
CLIC3-202ENST00000480181 RRP7AQ9Y3A4 280 aaKnown RBP27.35■■□□□ 1.97
CLIC3-202ENST00000480181 RIC1Q4ADV7 1423 aa27.34■■□□□ 1.97
CLIC3-202ENST00000480181 EIF4A1P60842 406 aaKnown RBP27.34■■□□□ 1.97
CLIC3-202ENST00000480181 NFE2L2Q16236 605 aa27.34■■□□□ 1.97
CLIC3-202ENST00000480181 ERBB4Q15303 1308 aa27.34■■□□□ 1.97
CLIC3-202ENST00000480181 HOXA10P31260 410 aaPredicted RBP27.33■■□□□ 1.97
CLIC3-202ENST00000480181 EIF6P56537 245 aaKnown RBP27.33■■□□□ 1.97
CLIC3-202ENST00000480181 MAPK8IP3Q9UPT6 1336 aa27.33■■□□□ 1.97
CLIC3-202ENST00000480181 ITGBL1O95965 494 aaPredicted RBP27.32■■□□□ 1.96
CLIC3-202ENST00000480181 OLFM4Q6UX06 510 aa27.32■■□□□ 1.96
CLIC3-202ENST00000480181 AIDAQ96BJ3 306 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms