RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.12
CLDN11-205ENST00000480067 ERVV-1B6SEH8 477 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 USPL1Q5W0Q7 1092 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 ZBTB3Q9H5J0 574 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 SRP68Q9UHB9 627 aaKnown RBP14.26□□□□□ -0.13
CLDN11-205ENST00000480067 PTPRCP08575 1304 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 MAP3K15Q6ZN16 1313 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 PI4KAP2A4QPH2 592 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-205ENST00000480067 CAMTA2O94983 1202 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-205ENST00000480067 KSR2Q6VAB6 950 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 PI4KAP1Q8N8J0 262 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 ZNF652Q9Y2D9 606 aa14.26□□□□□ -0.13
CLDN11-205ENST00000480067 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
CLDN11-205ENST00000480067 CLEC4GQ6UXB4 293 aa14.25□□□□□ -0.13
CLDN11-205ENST00000480067 HLFQ16534 295 aa14.24□□□□□ -0.13
CLDN11-205ENST00000480067 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
CLDN11-205ENST00000480067 PDGFDQ9GZP0 370 aaPredicted RBP14.24□□□□□ -0.13
CLDN11-205ENST00000480067 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
CLDN11-205ENST00000480067 RGL2O15211 777 aa14.23□□□□□ -0.13
CLDN11-205ENST00000480067 GYS1P13807 737 aa14.23□□□□□ -0.13
CLDN11-205ENST00000480067 ZKSCAN2Q63HK3 967 aa14.23□□□□□ -0.13
CLDN11-205ENST00000480067 GIGYF2Q6Y7W6 1299 aaKnown RBP14.23□□□□□ -0.13
CLDN11-205ENST00000480067 NLGN1Q8N2Q7 840 aa14.23□□□□□ -0.13
CLDN11-205ENST00000480067 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
CLDN11-205ENST00000480067 SLC16A10Q8TF71 515 aa14.23□□□□□ -0.13
CLDN11-205ENST00000480067 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
CLDN11-205ENST00000480067 SRCAPQ6ZRS2 3230 aa14.23□□□□□ -0.13
CLDN11-205ENST00000480067 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 F6X3S4 739 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 NEXNQ0ZGT2 675 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 FKBP8Q14318 412 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 HSP90AB3PQ58FF7 597 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 ATF7IPQ6VMQ6 1270 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 DNAAF4Q8WXU2 420 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
CLDN11-205ENST00000480067 ADCY9O60503 1353 aa14.21□□□□□ -0.13
CLDN11-205ENST00000480067 BICDL1Q6ZP65 573 aa14.21□□□□□ -0.14
CLDN11-205ENST00000480067 SETDB2Q96T68 719 aa14.21□□□□□ -0.14
CLDN11-205ENST00000480067 MYD88Q99836 296 aa14.21□□□□□ -0.14
CLDN11-205ENST00000480067 METTL22Q9BUU2 404 aaPredicted RBP14.21□□□□□ -0.14
CLDN11-205ENST00000480067 PLIN1O60240 522 aa14.2□□□□□ -0.14
CLDN11-205ENST00000480067 ZBTB7AO95365 584 aa14.2□□□□□ -0.14
CLDN11-205ENST00000480067 TRIM27P14373 513 aa14.2□□□□□ -0.14
CLDN11-205ENST00000480067 MSL1Q68DK7 614 aa14.2□□□□□ -0.14
CLDN11-205ENST00000480067 NIP7Q9Y221 180 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLDN11-205ENST00000480067 CACNA1FO60840 1977 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 ATP5J2-PTCD1G3V325 749 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 MS4A1P11836 297 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 GPTP24298 496 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 FTSJ3Q8IY81 847 aaKnown RBP14.19□□□□□ -0.14
CLDN11-205ENST00000480067 CLUAP1Q96AJ1 413 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 MTFR1LQ9H019 292 aa14.19□□□□□ -0.14
CLDN11-205ENST00000480067 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
CLDN11-205ENST00000480067 NFIXQ14938 502 aa14.18□□□□□ -0.14
CLDN11-205ENST00000480067 ZNF34Q8IZ26 560 aa14.18□□□□□ -0.14
CLDN11-205ENST00000480067 LINS1Q8NG48 757 aa14.18□□□□□ -0.14
CLDN11-205ENST00000480067 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
CLDN11-205ENST00000480067 TM4SF1P30408 202 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 TRIM28Q13263 835 aaKnown RBP14.17□□□□□ -0.14
CLDN11-205ENST00000480067 BEND3Q5T5X7 828 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
CLDN11-205ENST00000480067 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 MMP10P09238 476 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 CCT4P50991 539 aaKnown RBP14.17□□□□□ -0.14
CLDN11-205ENST00000480067 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
CLDN11-205ENST00000480067 PARP10Q53GL7 1025 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 CCDC191Q8NCU4 936 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 SRCIN1Q9C0H9 1055 aa14.17□□□□□ -0.14
CLDN11-205ENST00000480067 TUBGCP6Q96RT7 1819 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 NPHP1O15259 732 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 CWF19L2Q2TBE0 894 aaKnown RBP14.16□□□□□ -0.14
CLDN11-205ENST00000480067 PPP1R42Q7Z4L9 355 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 CWC25Q9NXE8 425 aaPredicted RBP14.16□□□□□ -0.14
CLDN11-205ENST00000480067 TNNQ9UQP3 1299 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 PARP3Q9Y6F1 533 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 QSER1Q2KHR3 1735 aa14.16□□□□□ -0.14
CLDN11-205ENST00000480067 C4AP0C0L4 1744 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 NEURL1BA8MQ27 555 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 ALDH1L1O75891 902 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 POLD1P28340 1107 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
CLDN11-205ENST00000480067 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 SUSD4Q5VX71 490 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 NBPF5PQ86XG9 351 aaPredicted RBP14.15□□□□□ -0.14
CLDN11-205ENST00000480067 CARMIL3Q8ND23 1372 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 ABCC4O15439 1325 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
CLDN11-205ENST00000480067 SERPINB2P05120 415 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms