RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 MAPK8IP3Q9UPT6 1336 aa8.85□□□□□ -0.99
FN1-220ENST00000480024 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
FN1-220ENST00000480024 C21orf2O43822 256 aa8.85□□□□□ -0.99
FN1-220ENST00000480024 TAF7Q15545 349 aaPredicted RBP8.85□□□□□ -0.99
FN1-220ENST00000480024 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
FN1-220ENST00000480024 NBPF5PQ86XG9 351 aaPredicted RBP8.85□□□□□ -0.99
FN1-220ENST00000480024 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
FN1-220ENST00000480024 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
FN1-220ENST00000480024 RRAGCQ9HB90 399 aa8.85□□□□□ -0.99
FN1-220ENST00000480024 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
FN1-220ENST00000480024 ZC3H4Q9UPT8 1303 aaKnown RBP8.84□□□□□ -0.99
FN1-220ENST00000480024 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
FN1-220ENST00000480024 APLP1P51693 650 aa8.84□□□□□ -0.99
FN1-220ENST00000480024 NFE2L2Q16236 605 aa8.84□□□□□ -0.99
FN1-220ENST00000480024 PRPF40BQ6NWY9 871 aaKnown RBP8.84□□□□□ -0.99
FN1-220ENST00000480024 PLEKHF1Q96S99 279 aa8.84□□□□□ -0.99
FN1-220ENST00000480024 NUP98P52948 1817 aa8.84□□□□□ -0.99
FN1-220ENST00000480024 SRGNP10124 158 aa8.83□□□□□ -1
FN1-220ENST00000480024 CLEC4GQ6UXB4 293 aa8.83□□□□□ -1
FN1-220ENST00000480024 NGEFQ8N5V2 710 aa8.83□□□□□ -1
FN1-220ENST00000480024 PNISRQ8TF01 805 aaKnown RBP8.83□□□□□ -1
FN1-220ENST00000480024 PDZRN3Q9UPQ7 1066 aa8.83□□□□□ -1
FN1-220ENST00000480024 NIP7Q9Y221 180 aaKnown RBP eCLIP8.83□□□□□ -14e-46■□□□□ 10.6
FN1-220ENST00000480024 GLTPD2A6NH11 291 aa8.82□□□□□ -1
FN1-220ENST00000480024 HTRA3P83110 453 aa8.82□□□□□ -1
FN1-220ENST00000480024 HLFQ16534 295 aa8.82□□□□□ -1
FN1-220ENST00000480024 STYK1Q6J9G0 422 aa8.82□□□□□ -1
FN1-220ENST00000480024 CNKSR1Q969H4 720 aa8.82□□□□□ -1
FN1-220ENST00000480024 MASTLQ96GX5 879 aa8.82□□□□□ -1
FN1-220ENST00000480024 TAOK3Q9H2K8 898 aa8.82□□□□□ -1
FN1-220ENST00000480024 ABCC12Q96J65 1359 aa8.82□□□□□ -1
FN1-220ENST00000480024 MYL6BP14649 208 aa8.81□□□□□ -1
FN1-220ENST00000480024 EIF4A1P60842 406 aaKnown RBP8.81□□□□□ -1
FN1-220ENST00000480024 FSTL1Q12841 308 aa8.81□□□□□ -1
FN1-220ENST00000480024 ERFEQ4G0M1 354 aa8.81□□□□□ -1
FN1-220ENST00000480024 PNNQ9H307 717 aaKnown RBP8.81□□□□□ -1
FN1-220ENST00000480024 TSPYL4Q9UJ04 414 aa8.81□□□□□ -1
FN1-220ENST00000480024 RRP7AQ9Y3A4 280 aaKnown RBP8.81□□□□□ -1
FN1-220ENST00000480024 LTBP3Q9NS15 1303 aa8.8□□□□□ -1
FN1-220ENST00000480024 RGL2O15211 777 aa8.8□□□□□ -1
FN1-220ENST00000480024 VEGFAP15692 232 aaPredicted RBP8.8□□□□□ -1
FN1-220ENST00000480024 NPR1P16066 1061 aa8.8□□□□□ -1
FN1-220ENST00000480024 GTF2E1P29083 439 aaPredicted RBP8.8□□□□□ -1
FN1-220ENST00000480024 DDX10Q13206 875 aaKnown RBP8.8□□□□□ -1
FN1-220ENST00000480024 RALBP1Q15311 655 aa8.8□□□□□ -1
FN1-220ENST00000480024 SOGA3Q5TF21 947 aa8.8□□□□□ -1
FN1-220ENST00000480024 OLFM4Q6UX06 510 aa8.8□□□□□ -1
FN1-220ENST00000480024 TPTE2Q6XPS3 522 aa8.8□□□□□ -1
FN1-220ENST00000480024 KIF6Q6ZMV9 814 aa8.8□□□□□ -1
FN1-220ENST00000480024 TTLL7Q6ZT98 887 aa8.8□□□□□ -1
FN1-220ENST00000480024 SMC1BQ8NDV3 1235 aa8.8□□□□□ -1
FN1-220ENST00000480024 ZBTB3Q9H5J0 574 aa8.8□□□□□ -1
FN1-220ENST00000480024 MAP3K15Q6ZN16 1313 aa8.8□□□□□ -1
FN1-220ENST00000480024 GPTP24298 496 aa8.79□□□□□ -1
FN1-220ENST00000480024 RIPK4P57078 832 aa8.79□□□□□ -1
FN1-220ENST00000480024 CCDC93Q567U6 631 aa8.79□□□□□ -1
FN1-220ENST00000480024 NUTM1Q86Y26 1132 aa8.79□□□□□ -1
FN1-220ENST00000480024 CCDC146Q8IYE0 955 aa8.79□□□□□ -1
FN1-220ENST00000480024 UBN2Q6ZU65 1347 aa8.79□□□□□ -1
FN1-220ENST00000480024 MYBBP1AQ9BQG0 1328 aaKnown RBP8.79□□□□□ -1
FN1-220ENST00000480024 ANKRD36CQ5JPF3 1778 aa8.78□□□□□ -1
FN1-220ENST00000480024 KLRG2A4D1S0 409 aaPredicted RBP8.78□□□□□ -1
FN1-220ENST00000480024 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
FN1-220ENST00000480024 EIF2S2P20042 333 aaKnown RBP8.78□□□□□ -1
FN1-220ENST00000480024 TMPOP42166 694 aaKnown RBP8.78□□□□□ -1
FN1-220ENST00000480024 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
FN1-220ENST00000480024 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
FN1-220ENST00000480024 DNAJC5GQ8N7S2 189 aa8.78□□□□□ -1
FN1-220ENST00000480024 C7orf43Q8WVR3 580 aa8.78□□□□□ -1
FN1-220ENST00000480024 NYXQ9GZU5 481 aa8.78□□□□□ -1
FN1-220ENST00000480024 RIC1Q4ADV7 1423 aa8.78□□□□□ -1
FN1-220ENST00000480024 ERBB4Q15303 1308 aa8.78□□□□□ -1
FN1-220ENST00000480024 IBTKQ9P2D0 1353 aaPredicted RBP8.77□□□□□ -1.01
FN1-220ENST00000480024 POTECB2RU33 542 aa8.77□□□□□ -1.01
FN1-220ENST00000480024 DDNO94850 711 aaPredicted RBP8.77□□□□□ -1.01
FN1-220ENST00000480024 ANXA1P04083 346 aa8.77□□□□□ -1.01
FN1-220ENST00000480024 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
FN1-220ENST00000480024 WDR43Q15061 677 aaKnown RBP eCLIP8.77□□□□□ -1.01
FN1-220ENST00000480024 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
FN1-220ENST00000480024 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
FN1-220ENST00000480024 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
FN1-220ENST00000480024 ZNF277Q9NRM2 450 aaPredicted RBP8.77□□□□□ -1.01
FN1-220ENST00000480024 ZNF541Q9H0D2 1346 aa8.77□□□□□ -1.01
FN1-220ENST00000480024 LAMB2P55268 1798 aa8.76□□□□□ -1.01
FN1-220ENST00000480024 SCN4AP35499 1836 aa8.76□□□□□ -1.01
FN1-220ENST00000480024 CRY2Q49AN0 593 aa8.76□□□□□ -1.01
FN1-220ENST00000480024 SUSD4Q5VX71 490 aa8.76□□□□□ -1.01
FN1-220ENST00000480024 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
FN1-220ENST00000480024 RPGRQ92834 1020 aaKnown RBP8.76□□□□□ -1.01
FN1-220ENST00000480024 KLRG1Q96E93 195 aa8.76□□□□□ -1.01
FN1-220ENST00000480024 SNED1Q8TER0 1413 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 NTSR2O95665 410 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 POTEIP0CG38 1075 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 POTEJP0CG39 1038 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 ALDH1B1P30837 517 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 PDIA6Q15084 440 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 KRT24Q2M2I5 525 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 LRP10Q7Z4F1 713 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 SLC51AQ86UW1 340 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms