RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 LRRC69Q6ZNQ3 347 aa10.55□□□□□ -0.72
COMMD3-212ENST00000479958 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
COMMD3-212ENST00000479958 PHACTR1Q9C0D0 580 aa10.55□□□□□ -0.72
COMMD3-212ENST00000479958 GDF2Q9UK05 429 aaPredicted RBP10.55□□□□□ -0.72
COMMD3-212ENST00000479958 C21orf2O43822 256 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 FAM157BP0CG42 384 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 IGFBP4P22692 258 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 CTBSQ01459 385 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 HIF1AQ16665 826 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 ACDQ96AP0 544 aa10.54□□□□□ -0.72
COMMD3-212ENST00000479958 C2orf49Q9BVC5 232 aaPredicted RBP10.54□□□□□ -0.72
COMMD3-212ENST00000479958 DCDC2BA2VCK2 349 aa10.53□□□□□ -0.72
COMMD3-212ENST00000479958 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
COMMD3-212ENST00000479958 SH3PXD2AQ5TCZ1 1133 aa10.53□□□□□ -0.72
COMMD3-212ENST00000479958 NEDD1Q8NHV4 660 aa10.53□□□□□ -0.72
COMMD3-212ENST00000479958 ARXQ96QS3 562 aa10.53□□□□□ -0.72
COMMD3-212ENST00000479958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.53□□□□□ -0.72
COMMD3-212ENST00000479958 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
COMMD3-212ENST00000479958 FAM182BQ5T319 152 aa10.52□□□□□ -0.73
COMMD3-212ENST00000479958 ALDH16A1Q8IZ83 802 aa10.52□□□□□ -0.73
COMMD3-212ENST00000479958 GOLGA6L1Q8N7Z2 621 aa10.52□□□□□ -0.73
COMMD3-212ENST00000479958 C7orf43Q8WVR3 580 aa10.52□□□□□ -0.73
COMMD3-212ENST00000479958 VTI1AQ96AJ9 217 aa10.52□□□□□ -0.73
COMMD3-212ENST00000479958 MARK1Q9P0L2 795 aa10.52□□□□□ -0.73
COMMD3-212ENST00000479958 ELOAQ14241 798 aaKnown RBP10.51□□□□□ -0.73
COMMD3-212ENST00000479958 ARID3CA6NKF2 412 aa10.5□□□□□ -0.73
COMMD3-212ENST00000479958 RNF225M0QZC1 329 aaPredicted RBP10.5□□□□□ -0.73
COMMD3-212ENST00000479958 OIP5O43482 229 aa10.5□□□□□ -0.73
COMMD3-212ENST00000479958 SCARF2Q96GP6 870 aaPredicted RBP10.5□□□□□ -0.73
COMMD3-212ENST00000479958 PRR12Q9ULL5 1215 aa10.5□□□□□ -0.73
COMMD3-212ENST00000479958 C2CD2LO14523 706 aa10.5□□□□□ -0.73
COMMD3-212ENST00000479958 NGLY1Q96IV0 654 aa10.5□□□□□ -0.73
COMMD3-212ENST00000479958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.49□□□□□ -0.73
COMMD3-212ENST00000479958 LGR5O75473 907 aa10.49□□□□□ -0.73
COMMD3-212ENST00000479958 ATG7O95352 703 aa10.49□□□□□ -0.73
COMMD3-212ENST00000479958 ARAFP10398 606 aa10.49□□□□□ -0.73
COMMD3-212ENST00000479958 CD33P20138 364 aa10.49□□□□□ -0.73
COMMD3-212ENST00000479958 SWI5Q1ZZU3 235 aa10.49□□□□□ -0.73
COMMD3-212ENST00000479958 GALNT6Q8NCL4 622 aa10.49□□□□□ -0.73
COMMD3-212ENST00000479958 FOXO3O43524 673 aa10.48□□□□□ -0.73
COMMD3-212ENST00000479958 WEE1P30291 646 aa10.48□□□□□ -0.73
COMMD3-212ENST00000479958 EDARADDQ8WWZ3 215 aa10.48□□□□□ -0.73
COMMD3-212ENST00000479958 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
COMMD3-212ENST00000479958 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
COMMD3-212ENST00000479958 CEP63Q96MT8 703 aa10.48□□□□□ -0.73
COMMD3-212ENST00000479958 AVENQ9NQS1 362 aaPredicted RBP10.48□□□□□ -0.73
COMMD3-212ENST00000479958 DNMT3AQ9Y6K1 912 aaPredicted RBP10.48□□□□□ -0.73
COMMD3-212ENST00000479958 ACIN1Q9UKV3 1341 aaKnown RBP10.47□□□□□ -0.73
COMMD3-212ENST00000479958 EFSO43281 561 aa10.47□□□□□ -0.73
COMMD3-212ENST00000479958 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
COMMD3-212ENST00000479958 RTN1Q16799 776 aa10.47□□□□□ -0.73
COMMD3-212ENST00000479958 GGA1Q9UJY5 639 aa10.47□□□□□ -0.73
COMMD3-212ENST00000479958 PODNQ7Z5L7 613 aa10.46□□□□□ -0.74
COMMD3-212ENST00000479958 BEND7Q8N7W2 519 aaPredicted RBP10.46□□□□□ -0.74
COMMD3-212ENST00000479958 ADH6P28332 368 aa10.45□□□□□ -0.74
COMMD3-212ENST00000479958 KCNMA1Q12791 1236 aa10.45□□□□□ -0.74
COMMD3-212ENST00000479958 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
COMMD3-212ENST00000479958 SLCO4C1Q6ZQN7 724 aa10.44□□□□□ -0.74
COMMD3-212ENST00000479958 HSH2DQ96JZ2 352 aa10.44□□□□□ -0.74
COMMD3-212ENST00000479958 NEURL1BA8MQ27 555 aa10.43□□□□□ -0.74
COMMD3-212ENST00000479958 PHF20L1A8MW92 1017 aa10.43□□□□□ -0.74
COMMD3-212ENST00000479958 BRD7Q9NPI1 651 aa10.43□□□□□ -0.74
COMMD3-212ENST00000479958 AMPD1P23109 780 aa10.42□□□□□ -0.74
COMMD3-212ENST00000479958 ZNF280CQ8ND82 737 aa10.42□□□□□ -0.74
COMMD3-212ENST00000479958 STRN4Q9NRL3 753 aa10.42□□□□□ -0.74
COMMD3-212ENST00000479958 KCNH4Q9UQ05 1017 aa10.42□□□□□ -0.74
COMMD3-212ENST00000479958 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
COMMD3-212ENST00000479958 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
COMMD3-212ENST00000479958 ZMIZ1Q9ULJ6 1067 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 KCNQ4P56696 695 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 IER5Q5VY09 327 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 BTLAQ7Z6A9 289 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 CCDC82Q8N4S0 544 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 PRIMPOLQ96LW4 560 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 RRAGCQ9HB90 399 aa10.41□□□□□ -0.74
COMMD3-212ENST00000479958 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.75
COMMD3-212ENST00000479958 EPXP11678 715 aa10.4□□□□□ -0.75
COMMD3-212ENST00000479958 PCBP4P57723 403 aaKnown RBP10.4□□□□□ -0.75
COMMD3-212ENST00000479958 C1orf229Q6ZS94 237 aaPredicted RBP10.4□□□□□ -0.75
COMMD3-212ENST00000479958 TMEM151AQ8N4L1 468 aa10.4□□□□□ -0.75
COMMD3-212ENST00000479958 HCN2Q9UL51 889 aa10.4□□□□□ -0.75
COMMD3-212ENST00000479958 TGFBR3LH3BV60 316 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 PRMT3O60678 531 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 ALAS2P22557 587 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 IRS1P35568 1242 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 RASSF7Q02833 373 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 TYRO3Q06418 890 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 C11orf91Q3C1V1 193 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 STK32AQ8WU08 396 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 BTBD6Q96KE9 485 aa10.39□□□□□ -0.75
COMMD3-212ENST00000479958 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
COMMD3-212ENST00000479958 PIK3R2O00459 728 aa10.38□□□□□ -0.75
COMMD3-212ENST00000479958 EPB42P16452 691 aa10.38□□□□□ -0.75
COMMD3-212ENST00000479958 SPEM2Q0P670 501 aa10.38□□□□□ -0.75
COMMD3-212ENST00000479958 FAM69CQ0P6D2 419 aa10.38□□□□□ -0.75
COMMD3-212ENST00000479958 SYT9Q86SS6 491 aa10.38□□□□□ -0.75
COMMD3-212ENST00000479958 MKL2Q9ULH7 1088 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms