RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 ZNF827Q17R98 1081 aa14.94□□□□□ -0.02
TRAPPC12-219ENST00000479955 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
TRAPPC12-219ENST00000479955 ATF7IPQ6VMQ6 1270 aa14.94□□□□□ -0.02
TRAPPC12-219ENST00000479955 ARHGEF1Q92888 912 aaKnown RBP14.94□□□□□ -0.02
TRAPPC12-219ENST00000479955 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
TRAPPC12-219ENST00000479955 UBR3Q6ZT12 1888 aa14.94□□□□□ -0.02
TRAPPC12-219ENST00000479955 MAP3K15Q6ZN16 1313 aa14.93□□□□□ -0.02
TRAPPC12-219ENST00000479955 PHF14O94880 888 aa14.93□□□□□ -0.02
TRAPPC12-219ENST00000479955 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
TRAPPC12-219ENST00000479955 CLEC4GQ6UXB4 293 aa14.93□□□□□ -0.02
TRAPPC12-219ENST00000479955 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
TRAPPC12-219ENST00000479955 PI4KAP2A4QPH2 592 aa14.92□□□□□ -0.02
TRAPPC12-219ENST00000479955 SOCS7O14512 581 aa14.92□□□□□ -0.02
TRAPPC12-219ENST00000479955 MSH5O43196 834 aa14.92□□□□□ -0.02
TRAPPC12-219ENST00000479955 TTLL7Q6ZT98 887 aa14.92□□□□□ -0.02
TRAPPC12-219ENST00000479955 PI4KAP1Q8N8J0 262 aa14.92□□□□□ -0.02
TRAPPC12-219ENST00000479955 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 GIGYF2Q6Y7W6 1299 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 DNAAF4Q8WXU2 420 aa14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 ZBTB3Q9H5J0 574 aa14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 MAP3K2Q9Y2U5 619 aa14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 SUPT16HQ9Y5B9 1047 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 USP42Q9H9J4 1324 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-219ENST00000479955 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 CCT4P50991 539 aaKnown RBP14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 RRP1P56182 461 aaKnown RBP14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 SLC16A10Q8TF71 515 aa14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 METTL22Q9BUU2 404 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 PNPLA7Q6ZV29 1317 aa14.9□□□□□ -0.02
TRAPPC12-219ENST00000479955 TRIM27P14373 513 aa14.89□□□□□ -0.03
TRAPPC12-219ENST00000479955 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
TRAPPC12-219ENST00000479955 USPL1Q5W0Q7 1092 aa14.89□□□□□ -0.03
TRAPPC12-219ENST00000479955 SLC4A10Q6U841 1118 aa14.89□□□□□ -0.03
TRAPPC12-219ENST00000479955 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
TRAPPC12-219ENST00000479955 ADCY9O60503 1353 aa14.88□□□□□ -0.03
TRAPPC12-219ENST00000479955 AMIGO3Q86WK7 504 aa14.88□□□□□ -0.03
TRAPPC12-219ENST00000479955 LINS1Q8NG48 757 aa14.88□□□□□ -0.03
TRAPPC12-219ENST00000479955 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
TRAPPC12-219ENST00000479955 F6X3S4 739 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 ALDH1L1O75891 902 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 HLFQ16534 295 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 SRCIN1Q9C0H9 1055 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 PXDNLA1KZ92 1463 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 ABCC4O15439 1325 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 NUP98P52948 1817 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
TRAPPC12-219ENST00000479955 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 ARFGEF2Q9Y6D5 1785 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 ATP10DQ9P241 1426 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 PLIN1O60240 522 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 GYS1P13807 737 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 PARP10Q53GL7 1025 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 INTS3Q68E01 1043 aaKnown RBP14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 CCDC191Q8NCU4 936 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 CLUAP1Q96AJ1 413 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 SETDB2Q96T68 719 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 MYD88Q99836 296 aa14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 SRP68Q9UHB9 627 aaKnown RBP14.86□□□□□ -0.03
TRAPPC12-219ENST00000479955 IBTKQ9P2D0 1353 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 BCORQ6W2J9 1755 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 SCN7AQ01118 1682 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 R3HDM1Q15032 1099 aaKnown RBP14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 BEND3Q5T5X7 828 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 PPP1R42Q7Z4L9 355 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 ISCA1Q9BUE6 129 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 HDAC5Q9UQL6 1122 aa14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 NIP7Q9Y221 180 aaKnown RBP eCLIP14.85□□□□□ -0.03
TRAPPC12-219ENST00000479955 BCL2L12Q9HB09 334 aa14.84□□□□□ -0.03
TRAPPC12-219ENST00000479955 CWC25Q9NXE8 425 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC12-219ENST00000479955 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.03
TRAPPC12-219ENST00000479955 NEURL1BA8MQ27 555 aa14.83□□□□□ -0.04
TRAPPC12-219ENST00000479955 ATP5J2-PTCD1G3V325 749 aa14.83□□□□□ -0.04
TRAPPC12-219ENST00000479955 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
TRAPPC12-219ENST00000479955 FKBP8Q14318 412 aa14.83□□□□□ -0.04
TRAPPC12-219ENST00000479955 NYXQ9GZU5 481 aa14.83□□□□□ -0.04
TRAPPC12-219ENST00000479955 DDX19BQ9UMR2 479 aa14.83□□□□□ -0.04
TRAPPC12-219ENST00000479955 IGKV5-2P06315 115 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 GPTP24298 496 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 TM4SF1P30408 202 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 GCKRQ14397 625 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 TBC1D9BQ66K14 1250 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 TPTE2Q6XPS3 522 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 NLRP10Q86W26 655 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 PANK1Q8TE04 598 aa14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 C9orf78Q9NZ63 289 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC12-219ENST00000479955 NEFLP07196 543 aa14.81□□□□□ -0.04
TRAPPC12-219ENST00000479955 GNAI3P08754 354 aa14.81□□□□□ -0.04
TRAPPC12-219ENST00000479955 MVPQ14764 893 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-219ENST00000479955 NFIXQ14938 502 aa14.81□□□□□ -0.04
TRAPPC12-219ENST00000479955 CWF19L2Q2TBE0 894 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms