RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 FER1L6Q2WGJ9 1857 aa22.98■■□□□ 1.27
ECHDC1-216ENST00000479525 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
ECHDC1-216ENST00000479525 RALBP1Q15311 655 aa22.98■■□□□ 1.27
ECHDC1-216ENST00000479525 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
ECHDC1-216ENST00000479525 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
ECHDC1-216ENST00000479525 ARFGEF2Q9Y6D5 1785 aa22.97■■□□□ 1.27
ECHDC1-216ENST00000479525 C21orf2O43822 256 aa22.97■■□□□ 1.27
ECHDC1-216ENST00000479525 MYL6BP14649 208 aa22.96■■□□□ 1.27
ECHDC1-216ENST00000479525 RIPK4P57078 832 aa22.96■■□□□ 1.27
ECHDC1-216ENST00000479525 BRIP1Q9BX63 1249 aa22.96■■□□□ 1.27
ECHDC1-216ENST00000479525 NFKBIEO00221 500 aa22.95■■□□□ 1.26
ECHDC1-216ENST00000479525 NBPF5PQ86XG9 351 aaPredicted RBP22.95■■□□□ 1.26
ECHDC1-216ENST00000479525 NIP7Q9Y221 180 aaKnown RBP eCLIP22.95■■□□□ 1.26
ECHDC1-216ENST00000479525 MYBBP1AQ9BQG0 1328 aaKnown RBP22.95■■□□□ 1.26
ECHDC1-216ENST00000479525 DICER1Q9UPY3 1922 aaKnown RBP22.95■■□□□ 1.26
ECHDC1-216ENST00000479525 PDE6BP35913 854 aa22.94■■□□□ 1.26
ECHDC1-216ENST00000479525 ST5P78524 1137 aa22.94■■□□□ 1.26
ECHDC1-216ENST00000479525 TTLL7Q6ZT98 887 aa22.94■■□□□ 1.26
ECHDC1-216ENST00000479525 TSPYL4Q9UJ04 414 aa22.93■■□□□ 1.26
ECHDC1-216ENST00000479525 ANXA1P04083 346 aa22.92■■□□□ 1.26
ECHDC1-216ENST00000479525 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
ECHDC1-216ENST00000479525 PNISRQ8TF01 805 aaKnown RBP22.92■■□□□ 1.26
ECHDC1-216ENST00000479525 NECTIN2Q92692 538 aa22.92■■□□□ 1.26
ECHDC1-216ENST00000479525 RRAGCQ9HB90 399 aa22.92■■□□□ 1.26
ECHDC1-216ENST00000479525 HSPA6P17066 643 aa22.91■■□□□ 1.26
ECHDC1-216ENST00000479525 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
ECHDC1-216ENST00000479525 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
ECHDC1-216ENST00000479525 EIF2S2P20042 333 aaKnown RBP22.9■■□□□ 1.26
ECHDC1-216ENST00000479525 ZBTB3Q9H5J0 574 aa22.9■■□□□ 1.26
ECHDC1-216ENST00000479525 LMNB1P20700 586 aa22.89■■□□□ 1.26
ECHDC1-216ENST00000479525 OLFM4Q6UX06 510 aa22.89■■□□□ 1.26
ECHDC1-216ENST00000479525 CLEC4GQ6UXB4 293 aa22.89■■□□□ 1.26
ECHDC1-216ENST00000479525 NUTM1Q86Y26 1132 aa22.89■■□□□ 1.26
ECHDC1-216ENST00000479525 SRGNP10124 158 aa22.89■■□□□ 1.25
ECHDC1-216ENST00000479525 GPTP24298 496 aa22.89■■□□□ 1.25
ECHDC1-216ENST00000479525 KRT24Q2M2I5 525 aa22.89■■□□□ 1.25
ECHDC1-216ENST00000479525 PRPF40BQ6NWY9 871 aaKnown RBP22.89■■□□□ 1.25
ECHDC1-216ENST00000479525 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
ECHDC1-216ENST00000479525 ABCC12Q96J65 1359 aa22.88■■□□□ 1.25
ECHDC1-216ENST00000479525 PROSER3Q2NL68 480 aa22.88■■□□□ 1.25
ECHDC1-216ENST00000479525 TOMM70O94826 608 aa22.87■■□□□ 1.25
ECHDC1-216ENST00000479525 KDM2BQ8NHM5 1336 aa22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 HTRA3P83110 453 aa22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 SLC51AQ86UW1 340 aa22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 ZNF428Q96B54 188 aa22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 MASTLQ96GX5 879 aa22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 ADAMTS8Q9UP79 889 aa22.86■■□□□ 1.25
ECHDC1-216ENST00000479525 MAP3K15Q6ZN16 1313 aa22.85■■□□□ 1.25
ECHDC1-216ENST00000479525 WDR90Q96KV7 1748 aa22.85■■□□□ 1.25
ECHDC1-216ENST00000479525 STYK1Q6J9G0 422 aa22.85■■□□□ 1.25
ECHDC1-216ENST00000479525 KIF6Q6ZMV9 814 aa22.85■■□□□ 1.25
ECHDC1-216ENST00000479525 UBN2Q6ZU65 1347 aa22.84■■□□□ 1.25
ECHDC1-216ENST00000479525 ANKRD36CQ5JPF3 1778 aa22.84■■□□□ 1.25
ECHDC1-216ENST00000479525 GTF2E1P29083 439 aaPredicted RBP22.84■■□□□ 1.25
ECHDC1-216ENST00000479525 TPTE2Q6XPS3 522 aa22.84■■□□□ 1.25
ECHDC1-216ENST00000479525 CNKSR1Q969H4 720 aa22.84■■□□□ 1.25
ECHDC1-216ENST00000479525 ERFEQ4G0M1 354 aa22.83■■□□□ 1.25
ECHDC1-216ENST00000479525 PRKRIP1Q9H875 184 aaPredicted RBP22.83■■□□□ 1.25
ECHDC1-216ENST00000479525 TRIM35Q9UPQ4 493 aa22.83■■□□□ 1.25
ECHDC1-216ENST00000479525 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
ECHDC1-216ENST00000479525 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
ECHDC1-216ENST00000479525 PDIA6Q15084 440 aa22.81■■□□□ 1.24
ECHDC1-216ENST00000479525 SUSD4Q5VX71 490 aa22.81■■□□□ 1.24
ECHDC1-216ENST00000479525 TAOK3Q9H2K8 898 aa22.81■■□□□ 1.24
ECHDC1-216ENST00000479525 LAMB2P55268 1798 aa22.81■■□□□ 1.24
ECHDC1-216ENST00000479525 GLTPD2A6NH11 291 aa22.8■■□□□ 1.24
ECHDC1-216ENST00000479525 AIMP1Q12904 312 aaKnown RBP22.8■■□□□ 1.24
ECHDC1-216ENST00000479525 NPR1P16066 1061 aa22.79■■□□□ 1.24
ECHDC1-216ENST00000479525 LMOD3Q0VAK6 560 aa22.79■■□□□ 1.24
ECHDC1-216ENST00000479525 LRP10Q7Z4F1 713 aa22.79■■□□□ 1.24
ECHDC1-216ENST00000479525 ERVV-1B6SEH8 477 aa22.78■■□□□ 1.24
ECHDC1-216ENST00000479525 C3orf67Q6ZVT6 689 aa22.78■■□□□ 1.24
ECHDC1-216ENST00000479525 RBM46Q8TBY0 533 aaKnown RBP22.78■■□□□ 1.24
ECHDC1-216ENST00000479525 TAF1P21675 1872 aa22.78■■□□□ 1.24
ECHDC1-216ENST00000479525 TCERG1O14776 1098 aaKnown RBP22.77■■□□□ 1.24
ECHDC1-216ENST00000479525 C7orf43Q8WVR3 580 aa22.77■■□□□ 1.24
ECHDC1-216ENST00000479525 KLRG2A4D1S0 409 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 POTECB2RU33 542 aa22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 CCDC184Q52MB2 194 aa22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 ZNF277Q9NRM2 450 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 DDNO94850 711 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 GIGYF2Q6Y7W6 1299 aaKnown RBP22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 ZNF34Q8IZ26 560 aa22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 XAGE3Q8WTP9 111 aa22.76■■□□□ 1.23
ECHDC1-216ENST00000479525 ZC3H4Q9UPT8 1303 aaKnown RBP22.75■■□□□ 1.23
ECHDC1-216ENST00000479525 NTSR2O95665 410 aa22.75■■□□□ 1.23
ECHDC1-216ENST00000479525 CCDC93Q567U6 631 aa22.75■■□□□ 1.23
ECHDC1-216ENST00000479525 COPS6Q7L5N1 327 aa22.75■■□□□ 1.23
ECHDC1-216ENST00000479525 NYXQ9GZU5 481 aa22.75■■□□□ 1.23
ECHDC1-216ENST00000479525 CHL1O00533 1208 aa22.74■■□□□ 1.23
ECHDC1-216ENST00000479525 SYNE4Q8N205 404 aa22.74■■□□□ 1.23
ECHDC1-216ENST00000479525 ERBB4Q15303 1308 aa22.74■■□□□ 1.23
ECHDC1-216ENST00000479525 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
ECHDC1-216ENST00000479525 APAF1O14727 1248 aa22.73■■□□□ 1.23
ECHDC1-216ENST00000479525 RGL2O15211 777 aa22.73■■□□□ 1.23
ECHDC1-216ENST00000479525 VEGFAP15692 232 aaPredicted RBP22.73■■□□□ 1.23
ECHDC1-216ENST00000479525 APLP1P51693 650 aa22.73■■□□□ 1.23
ECHDC1-216ENST00000479525 CHPF2Q9P2E5 772 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms