RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 LRRC59Q96AG4 307 aaKnown RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 DIAPH3Q9NSV4 1193 aa29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 NSFL1CQ9UNZ2 370 aaKnown RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 ADAMTS7Q9UKP4 1686 aa29.67■■■□□ 2.34
SYNGAP1-206ENST00000479510 TM6SF1Q9BZW5 370 aa29.67■■■□□ 2.34
SYNGAP1-206ENST00000479510 PXDNQ92626 1479 aa29.67■■■□□ 2.34
SYNGAP1-206ENST00000479510 RPAP1Q9BWH6 1393 aaPredicted RBP29.66■■■□□ 2.34
SYNGAP1-206ENST00000479510 LINS1Q8NG48 757 aa29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 CHAMP1Q96JM3 812 aa29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 NOL7Q9UMY1 257 aaKnown RBP29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 SIPA1L3O60292 1781 aaPredicted RBP29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 DDX58O95786 925 aaKnown RBP29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 MCM5P33992 734 aa29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 EVI5LQ96CN4 794 aa29.65■■■□□ 2.34
SYNGAP1-206ENST00000479510 HIP1O00291 1037 aa29.64■■■□□ 2.34
SYNGAP1-206ENST00000479510 CWC27Q6UX04 472 aaKnown RBP29.64■■■□□ 2.34
SYNGAP1-206ENST00000479510 AK2P54819 239 aa29.64■■■□□ 2.33
SYNGAP1-206ENST00000479510 RASEFQ8IZ41 740 aa29.64■■■□□ 2.33
SYNGAP1-206ENST00000479510 TSPY26PQ9H489 355 aa29.64■■■□□ 2.33
SYNGAP1-206ENST00000479510 ANXA1P04083 346 aa29.63■■■□□ 2.33
SYNGAP1-206ENST00000479510 IFIT2P09913 472 aaKnown RBP29.63■■■□□ 2.33
SYNGAP1-206ENST00000479510 ANKRD24Q8TF21 1146 aa29.63■■■□□ 2.33
SYNGAP1-206ENST00000479510 ATP6V1DQ9Y5K8 247 aa29.63■■■□□ 2.33
SYNGAP1-206ENST00000479510 VPS53Q5VIR6 699 aa29.62■■■□□ 2.33
SYNGAP1-206ENST00000479510 ZSCAN31Q96LW9 406 aaPredicted RBP29.62■■■□□ 2.33
SYNGAP1-206ENST00000479510 ZSCAN22P10073 491 aaPredicted RBP29.62■■■□□ 2.33
SYNGAP1-206ENST00000479510 RUFY3Q7L099 469 aa29.62■■■□□ 2.33
SYNGAP1-206ENST00000479510 DDX21Q9NR30 783 aaKnown RBP eCLIP29.62■■■□□ 2.33
SYNGAP1-206ENST00000479510 MST1RQ04912 1400 aa29.62■■■□□ 2.33
SYNGAP1-206ENST00000479510 ZBTB7CA1YPR0 619 aa29.61■■■□□ 2.33
SYNGAP1-206ENST00000479510 SH2B1Q9NRF2 756 aaPredicted RBP29.61■■■□□ 2.33
SYNGAP1-206ENST00000479510 TPM2P07951 284 aa29.6■■■□□ 2.33
SYNGAP1-206ENST00000479510 PDIA4P13667 645 aaKnown RBP29.6■■■□□ 2.33
SYNGAP1-206ENST00000479510 USP48Q86UV5 1035 aa29.6■■■□□ 2.33
SYNGAP1-206ENST00000479510 GRM8O00222 908 aa29.6■■■□□ 2.33
SYNGAP1-206ENST00000479510 OFD1O75665 1012 aa29.6■■■□□ 2.33
SYNGAP1-206ENST00000479510 ZNF500O60304 480 aaPredicted RBP29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 FAM184AQ8NB25 1140 aa29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 SNRKQ9NRH2 765 aa29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 SETD1BQ9UPS6 1966 aaKnown RBP29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 LETM1O95202 739 aaPredicted RBP29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 TERF1P54274 439 aa29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 PROSER3Q2NL68 480 aa29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 ZSWIM6Q9HCJ5 1215 aa29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 SPG7Q9UQ90 795 aa29.59■■■□□ 2.33
SYNGAP1-206ENST00000479510 STX6O43752 255 aa29.58■■■□□ 2.33
SYNGAP1-206ENST00000479510 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.58■■■□□ 2.33
SYNGAP1-206ENST00000479510 CCDC39Q9UFE4 941 aa29.58■■■□□ 2.33
SYNGAP1-206ENST00000479510 SMC3Q9UQE7 1217 aa29.58■■■□□ 2.33
SYNGAP1-206ENST00000479510 CASTP20810 708 aaKnown RBP29.57■■■□□ 2.32
SYNGAP1-206ENST00000479510 TRPM3Q9HCF6 1732 aaPredicted RBP29.57■■■□□ 2.32
SYNGAP1-206ENST00000479510 CSPP1Q1MSJ5 1256 aa29.56■■■□□ 2.32
SYNGAP1-206ENST00000479510 UVSSAQ2YD98 709 aa29.56■■■□□ 2.32
SYNGAP1-206ENST00000479510 CYP46A1Q9Y6A2 500 aa29.56■■■□□ 2.32
SYNGAP1-206ENST00000479510 SYT1P21579 422 aa29.56■■■□□ 2.32
SYNGAP1-206ENST00000479510 G3BP1Q13283 466 aaKnown RBP eCLIP29.56■■■□□ 2.32
SYNGAP1-206ENST00000479510 AACSQ86V21 672 aa29.56■■■□□ 2.32
SYNGAP1-206ENST00000479510 PDRG1Q9NUG6 133 aa29.55■■■□□ 2.32
SYNGAP1-206ENST00000479510 PLEKHG2Q9H7P9 1386 aa29.55■■■□□ 2.32
SYNGAP1-206ENST00000479510 CCDC171Q6TFL3 1326 aa29.55■■■□□ 2.32
SYNGAP1-206ENST00000479510 ZKSCAN1P17029 563 aaPredicted RBP29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 NECTIN1Q15223 517 aa29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 CCDC183Q5T5S1 534 aa29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 NPHP4O75161 1426 aaPredicted RBP29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 F13A1P00488 732 aa29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 UBE2HP62256 183 aa29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 CWF19L2Q2TBE0 894 aaKnown RBP29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 ZKSCAN5Q9Y2L8 839 aa29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 KIF1AQ12756 1690 aa29.54■■■□□ 2.32
SYNGAP1-206ENST00000479510 GADD45BO75293 160 aaPredicted RBP29.53■■■□□ 2.32
SYNGAP1-206ENST00000479510 PTH1RQ03431 593 aa29.53■■■□□ 2.32
SYNGAP1-206ENST00000479510 LARP1Q6PKG0 1096 aaKnown RBP29.53■■■□□ 2.32
SYNGAP1-206ENST00000479510 SUCLG2Q96I99 432 aa29.53■■■□□ 2.32
SYNGAP1-206ENST00000479510 KAZALD1Q96I82 304 aa29.52■■■□□ 2.32
SYNGAP1-206ENST00000479510 JAKMIP1Q96N16 626 aaKnown RBP29.52■■■□□ 2.32
SYNGAP1-206ENST00000479510 PA2G4Q9UQ80 394 aaKnown RBP29.52■■■□□ 2.32
SYNGAP1-206ENST00000479510 MRC1P22897 1456 aa29.52■■■□□ 2.32
SYNGAP1-206ENST00000479510 ABCC6O95255 1503 aa29.52■■■□□ 2.32
SYNGAP1-206ENST00000479510 ORAI2Q96SN7 254 aa29.52■■■□□ 2.32
SYNGAP1-206ENST00000479510 PDIA6Q15084 440 aa29.51■■■□□ 2.31
SYNGAP1-206ENST00000479510 RBM33Q96EV2 1170 aaKnown RBP29.51■■■□□ 2.31
SYNGAP1-206ENST00000479510 SASH1O94885 1247 aa29.51■■■□□ 2.31
SYNGAP1-206ENST00000479510 PRPF40BQ6NWY9 871 aaKnown RBP29.51■■■□□ 2.31
SYNGAP1-206ENST00000479510 MAP4K1Q92918 833 aa29.51■■■□□ 2.31
SYNGAP1-206ENST00000479510 BICC1Q9H694 974 aaKnown RBP29.51■■■□□ 2.31
SYNGAP1-206ENST00000479510 PSMA5P28066 241 aa29.5■■■□□ 2.31
SYNGAP1-206ENST00000479510 GDPD2Q9HCC8 539 aa29.49■■■□□ 2.31
SYNGAP1-206ENST00000479510 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.49■■■□□ 2.31
SYNGAP1-206ENST00000479510 ALDH8A1Q9H2A2 487 aaPredicted RBP29.49■■■□□ 2.31
SYNGAP1-206ENST00000479510 NEXNQ0ZGT2 675 aa29.48■■■□□ 2.31
SYNGAP1-206ENST00000479510 EAF2Q96CJ1 260 aaPredicted RBP29.48■■■□□ 2.31
SYNGAP1-206ENST00000479510 CNPY2Q9Y2B0 182 aa29.48■■■□□ 2.31
SYNGAP1-206ENST00000479510 ERBB3P21860 1342 aa29.48■■■□□ 2.31
SYNGAP1-206ENST00000479510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.48■■■□□ 2.31
SYNGAP1-206ENST00000479510 RBM8AQ9Y5S9 174 aaKnown RBP29.48■■■□□ 2.31
SYNGAP1-206ENST00000479510 PRAMEF22A3QJZ6 481 aa29.47■■■□□ 2.31
SYNGAP1-206ENST00000479510 CREB3L3Q68CJ9 461 aa29.47■■■□□ 2.31
SYNGAP1-206ENST00000479510 ZNF790Q6PG37 636 aa29.47■■■□□ 2.31
SYNGAP1-206ENST00000479510 KRT28Q7Z3Y7 464 aa29.47■■■□□ 2.31
SYNGAP1-206ENST00000479510 AXIN2Q9Y2T1 843 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms