RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
CMTM1-208ENST00000479381 TGFB2P61812 414 aa11.89□□□□□ -0.51
CMTM1-208ENST00000479381 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
CMTM1-208ENST00000479381 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
CMTM1-208ENST00000479381 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
CMTM1-208ENST00000479381 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
CMTM1-208ENST00000479381 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
CMTM1-208ENST00000479381 SERPINB2P05120 415 aa11.88□□□□□ -0.51
CMTM1-208ENST00000479381 DPEP1P16444 411 aa11.88□□□□□ -0.51
CMTM1-208ENST00000479381 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
CMTM1-208ENST00000479381 DDR1Q08345 913 aa11.88□□□□□ -0.51
CMTM1-208ENST00000479381 NFIXQ14938 502 aa11.88□□□□□ -0.51
CMTM1-208ENST00000479381 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
CMTM1-208ENST00000479381 MYL6BP14649 208 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 EIF2S2P20042 333 aaKnown RBP11.87□□□□□ -0.51
CMTM1-208ENST00000479381 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-208ENST00000479381 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
CMTM1-208ENST00000479381 ST5P78524 1137 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-208ENST00000479381 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 PXDNLA1KZ92 1463 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
CMTM1-208ENST00000479381 CHRNA5P30532 468 aa11.86□□□□□ -0.51
CMTM1-208ENST00000479381 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
CMTM1-208ENST00000479381 ZNF579Q8NAF0 562 aaKnown RBP11.86□□□□□ -0.51
CMTM1-208ENST00000479381 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
CMTM1-208ENST00000479381 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
CMTM1-208ENST00000479381 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
CMTM1-208ENST00000479381 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 CLCN6P51797 869 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
CMTM1-208ENST00000479381 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 ZNF784Q8NCA9 323 aaPredicted RBP11.85□□□□□ -0.51
CMTM1-208ENST00000479381 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
CMTM1-208ENST00000479381 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
CMTM1-208ENST00000479381 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
CMTM1-208ENST00000479381 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
CMTM1-208ENST00000479381 H0YIN7 160 aa11.84□□□□□ -0.51
CMTM1-208ENST00000479381 TM4SF1P30408 202 aa11.84□□□□□ -0.51
CMTM1-208ENST00000479381 NBPF5PQ86XG9 351 aaPredicted RBP11.84□□□□□ -0.51
CMTM1-208ENST00000479381 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
CMTM1-208ENST00000479381 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
CMTM1-208ENST00000479381 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-208ENST00000479381 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
CMTM1-208ENST00000479381 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
CMTM1-208ENST00000479381 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
CMTM1-208ENST00000479381 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
CMTM1-208ENST00000479381 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
CMTM1-208ENST00000479381 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
CMTM1-208ENST00000479381 PDE6BP35913 854 aa11.82□□□□□ -0.52
CMTM1-208ENST00000479381 CALD1Q05682 793 aaKnown RBP11.82□□□□□ -0.52
CMTM1-208ENST00000479381 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
CMTM1-208ENST00000479381 APAF1O14727 1248 aa11.81□□□□□ -0.52
CMTM1-208ENST00000479381 GABBR2O75899 941 aa11.81□□□□□ -0.52
CMTM1-208ENST00000479381 AIMP1Q12904 312 aaKnown RBP11.81□□□□□ -0.52
CMTM1-208ENST00000479381 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-208ENST00000479381 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
CMTM1-208ENST00000479381 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
CMTM1-208ENST00000479381 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 GPTP24298 496 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 NUBP1P53384 320 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
CMTM1-208ENST00000479381 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
CMTM1-208ENST00000479381 ANXA1P04083 346 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 BRIP1Q9BX63 1249 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 NYXQ9GZU5 481 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 MAP3K15Q6ZN16 1313 aa11.78□□□□□ -0.52
CMTM1-208ENST00000479381 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
CMTM1-208ENST00000479381 GNAI1P63096 354 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 HLFQ16534 295 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 TTLL7Q6ZT98 887 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
CMTM1-208ENST00000479381 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.53
CMTM1-208ENST00000479381 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-208ENST00000479381 KCNA3P22001 575 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms