RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 LRP5O75197 1615 aa17.96■□□□□ 0.47
PCIF1-202ENST00000479348 ANXA1P04083 346 aa17.96■□□□□ 0.46
PCIF1-202ENST00000479348 FKBP8Q14318 412 aa17.96■□□□□ 0.46
PCIF1-202ENST00000479348 COPS6Q7L5N1 327 aa17.96■□□□□ 0.46
PCIF1-202ENST00000479348 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.46
PCIF1-202ENST00000479348 TTLL7Q6ZT98 887 aa17.95■□□□□ 0.46
PCIF1-202ENST00000479348 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
PCIF1-202ENST00000479348 MMP10P09238 476 aa17.94■□□□□ 0.46
PCIF1-202ENST00000479348 TM4SF1P30408 202 aa17.94■□□□□ 0.46
PCIF1-202ENST00000479348 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
PCIF1-202ENST00000479348 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
PCIF1-202ENST00000479348 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
PCIF1-202ENST00000479348 AIMP1Q12904 312 aaKnown RBP17.93■□□□□ 0.46
PCIF1-202ENST00000479348 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
PCIF1-202ENST00000479348 PARP3Q9Y6F1 533 aa17.93■□□□□ 0.46
PCIF1-202ENST00000479348 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
PCIF1-202ENST00000479348 NFIXQ14938 502 aa17.92■□□□□ 0.46
PCIF1-202ENST00000479348 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
PCIF1-202ENST00000479348 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
PCIF1-202ENST00000479348 PPP1R1BQ9UD71 204 aaPredicted RBP17.92■□□□□ 0.46
PCIF1-202ENST00000479348 BCORQ6W2J9 1755 aa17.92■□□□□ 0.46
PCIF1-202ENST00000479348 CACNA1FO60840 1977 aa17.91■□□□□ 0.46
PCIF1-202ENST00000479348 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
PCIF1-202ENST00000479348 SETDB2Q96T68 719 aa17.91■□□□□ 0.46
PCIF1-202ENST00000479348 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
PCIF1-202ENST00000479348 PHAXQ9H814 394 aaKnown RBP17.91■□□□□ 0.46
PCIF1-202ENST00000479348 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
PCIF1-202ENST00000479348 HLFQ16534 295 aa17.9■□□□□ 0.46
PCIF1-202ENST00000479348 ALDH1L2Q3SY69 923 aa17.9■□□□□ 0.46
PCIF1-202ENST00000479348 HSP90AB3PQ58FF7 597 aa17.9■□□□□ 0.46
PCIF1-202ENST00000479348 ATP10DQ9P241 1426 aa17.89■□□□□ 0.45
PCIF1-202ENST00000479348 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
PCIF1-202ENST00000479348 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
PCIF1-202ENST00000479348 DDR1Q08345 913 aa17.88■□□□□ 0.45
PCIF1-202ENST00000479348 FLIIQ13045 1269 aa17.88■□□□□ 0.45
PCIF1-202ENST00000479348 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
PCIF1-202ENST00000479348 RIC3Q7Z5B4 369 aa17.88■□□□□ 0.45
PCIF1-202ENST00000479348 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
PCIF1-202ENST00000479348 SERPINB2P05120 415 aa17.87■□□□□ 0.45
PCIF1-202ENST00000479348 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
PCIF1-202ENST00000479348 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
PCIF1-202ENST00000479348 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
PCIF1-202ENST00000479348 PARP10Q53GL7 1025 aa17.86■□□□□ 0.45
PCIF1-202ENST00000479348 G2E3Q7L622 706 aa17.86■□□□□ 0.45
PCIF1-202ENST00000479348 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
PCIF1-202ENST00000479348 CD2APQ9Y5K6 639 aa17.86■□□□□ 0.45
PCIF1-202ENST00000479348 NUP98P52948 1817 aa17.86■□□□□ 0.45
PCIF1-202ENST00000479348 BRPF1P55201 1214 aaPredicted RBP17.85■□□□□ 0.45
PCIF1-202ENST00000479348 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
PCIF1-202ENST00000479348 PI4KAP2A4QPH2 592 aa17.84■□□□□ 0.45
PCIF1-202ENST00000479348 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
PCIF1-202ENST00000479348 FKBP5Q13451 457 aaPredicted RBP17.84■□□□□ 0.45
PCIF1-202ENST00000479348 TPTE2Q6XPS3 522 aa17.84■□□□□ 0.45
PCIF1-202ENST00000479348 PI4KAP1Q8N8J0 262 aa17.84■□□□□ 0.45
PCIF1-202ENST00000479348 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
PCIF1-202ENST00000479348 IBTKQ9P2D0 1353 aaPredicted RBP17.84■□□□□ 0.45
PCIF1-202ENST00000479348 RARSP54136 660 aaKnown RBP17.83■□□□□ 0.44
PCIF1-202ENST00000479348 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.44
PCIF1-202ENST00000479348 NBPF5PQ86XG9 351 aaPredicted RBP17.83■□□□□ 0.44
PCIF1-202ENST00000479348 METTL22Q9BUU2 404 aaPredicted RBP17.83■□□□□ 0.44
PCIF1-202ENST00000479348 FHDC1Q9C0D6 1143 aaPredicted RBP17.83■□□□□ 0.44
PCIF1-202ENST00000479348 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
PCIF1-202ENST00000479348 MAP3K2Q9Y2U5 619 aa17.83■□□□□ 0.44
PCIF1-202ENST00000479348 PTPRCP08575 1304 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 RNF123Q5XPI4 1314 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 GPTP24298 496 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 ISCA1Q9BUE6 129 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 ADCY9O60503 1353 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 NRXN2Q9P2S2 1712 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
PCIF1-202ENST00000479348 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
PCIF1-202ENST00000479348 NPHP1O15259 732 aa17.81■□□□□ 0.44
PCIF1-202ENST00000479348 NEXNQ0ZGT2 675 aa17.81■□□□□ 0.44
PCIF1-202ENST00000479348 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
PCIF1-202ENST00000479348 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
PCIF1-202ENST00000479348 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
PCIF1-202ENST00000479348 TGFB2P61812 414 aa17.8■□□□□ 0.44
PCIF1-202ENST00000479348 ST5P78524 1137 aa17.8■□□□□ 0.44
PCIF1-202ENST00000479348 PRR5LQ6MZQ0 368 aa17.8■□□□□ 0.44
PCIF1-202ENST00000479348 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
PCIF1-202ENST00000479348 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
PCIF1-202ENST00000479348 DNAAF4Q8WXU2 420 aa17.8■□□□□ 0.44
PCIF1-202ENST00000479348 GTF2E1P29083 439 aaPredicted RBP17.79■□□□□ 0.44
PCIF1-202ENST00000479348 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 KLHL34Q8N239 644 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 MYD88Q99836 296 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 UTP14AQ9BVJ6 771 aaKnown RBP17.79■□□□□ 0.44
PCIF1-202ENST00000479348 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 BCL2L13Q9BXK5 485 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
PCIF1-202ENST00000479348 KIF16BQ96L93 1317 aa17.79■□□□□ 0.44
PCIF1-202ENST00000479348 NTSR2O95665 410 aa17.78■□□□□ 0.44
PCIF1-202ENST00000479348 KIF13BQ9NQT8 1826 aa17.78■□□□□ 0.44
PCIF1-202ENST00000479348 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
PCIF1-202ENST00000479348 ATP5J2-PTCD1G3V325 749 aa17.77■□□□□ 0.44
PCIF1-202ENST00000479348 PDE6BP35913 854 aa17.77■□□□□ 0.44
PCIF1-202ENST00000479348 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms