RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 DIAPH3Q9NSV4 1193 aa15.97■□□□□ 0.15
CNKSR3-204ENST00000479339 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
CNKSR3-204ENST00000479339 MBD3O95983 291 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 BMP2KLQ5H9B9 411 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 ZNF771Q7L3S4 317 aaPredicted RBP15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 ANKRD7Q92527 254 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 SPTLC3Q9NUV7 552 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 CGNQ9P2M7 1197 aaKnown RBP15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
CNKSR3-204ENST00000479339 CT47B1P0C2W7 299 aaPredicted RBP15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 FKBP5Q13451 457 aaPredicted RBP15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 ZNF830Q96NB3 372 aaPredicted RBP15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 OGFRQ9NZT2 677 aa15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 NOLC1Q14978 699 aaKnown RBP eCLIP15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 ZKSCAN2Q63HK3 967 aa15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 FTSJ3Q8IY81 847 aaKnown RBP15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 DNAJC2Q99543 621 aaKnown RBP15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 SRCAPQ6ZRS2 3230 aa15.95■□□□□ 0.14
CNKSR3-204ENST00000479339 CFAP44Q96MT7 982 aa15.94■□□□□ 0.14
CNKSR3-204ENST00000479339 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
CNKSR3-204ENST00000479339 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
CNKSR3-204ENST00000479339 DZIP1LQ8IYY4 767 aaKnown RBP15.94■□□□□ 0.14
CNKSR3-204ENST00000479339 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
CNKSR3-204ENST00000479339 DDX19BQ9UMR2 479 aa15.94■□□□□ 0.14
CNKSR3-204ENST00000479339 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
CNKSR3-204ENST00000479339 ZNF827Q17R98 1081 aa15.93■□□□□ 0.14
CNKSR3-204ENST00000479339 UVSSAQ2YD98 709 aa15.93■□□□□ 0.14
CNKSR3-204ENST00000479339 LY75O60449 1722 aa15.93■□□□□ 0.14
CNKSR3-204ENST00000479339 CD2BP2O95400 341 aaKnown RBP15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 FAM193AP78312 1265 aa15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 SYCP1Q15431 976 aa15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 NUCB1Q02818 461 aa15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 RABEP1Q15276 862 aa15.92■□□□□ 0.14
CNKSR3-204ENST00000479339 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
CNKSR3-204ENST00000479339 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
CNKSR3-204ENST00000479339 GPT2Q8TD30 523 aa15.91■□□□□ 0.14
CNKSR3-204ENST00000479339 SYAP1Q96A49 352 aaPredicted RBP15.91■□□□□ 0.14
CNKSR3-204ENST00000479339 TSPYL1Q9H0U9 437 aa15.91■□□□□ 0.14
CNKSR3-204ENST00000479339 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 PHKG2P15735 406 aa15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 IFNL2Q8IZJ0 200 aa15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 TSPY26PQ9H489 355 aa15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 CCNL1Q9UK58 526 aaPredicted RBP15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 PHF14O94880 888 aa15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 MTFR1LQ9H019 292 aa15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 PPP1R1BQ9UD71 204 aaPredicted RBP15.9■□□□□ 0.14
CNKSR3-204ENST00000479339 SYCE3A1L190 88 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 CTIFO43310 598 aaKnown RBP15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 IL13P35225 146 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 PTGER2P43116 358 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 CREBRFQ8IUR6 639 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 TNNQ9UQP3 1299 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 VGLL3A8MV65 326 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 KCNQ4P56696 695 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 SMARCC1Q92922 1105 aaPredicted RBP15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
CNKSR3-204ENST00000479339 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
CNKSR3-204ENST00000479339 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
CNKSR3-204ENST00000479339 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
CNKSR3-204ENST00000479339 HMGB2P26583 209 aaKnown RBP15.88■□□□□ 0.13
CNKSR3-204ENST00000479339 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
CNKSR3-204ENST00000479339 PIGBQ92521 554 aa15.88■□□□□ 0.13
CNKSR3-204ENST00000479339 TPM3P06753 285 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 RUNDC1Q96C34 613 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 TIGD1Q96MW7 591 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 KDRP35968 1356 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 U2AF2P26368 475 aaKnown RBP eCLIP15.87■□□□□ 0.132e-7■■■□□ 15.1
CNKSR3-204ENST00000479339 MTHFSP49914 203 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 AMOTQ4VCS5 1084 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 TSC1Q92574 1164 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 SGIP1Q9BQI5 828 aa15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
CNKSR3-204ENST00000479339 ITGB4P16144 1822 aa15.86■□□□□ 0.13
CNKSR3-204ENST00000479339 PNPLA7Q6ZV29 1317 aa15.86■□□□□ 0.13
CNKSR3-204ENST00000479339 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
CNKSR3-204ENST00000479339 SLC16A10Q8TF71 515 aa15.86■□□□□ 0.13
CNKSR3-204ENST00000479339 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
CNKSR3-204ENST00000479339 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
CNKSR3-204ENST00000479339 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
CNKSR3-204ENST00000479339 SULT6B1Q6IMI4 303 aa15.85■□□□□ 0.13
CNKSR3-204ENST00000479339 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
CNKSR3-204ENST00000479339 KCNJ4P48050 445 aa15.84■□□□□ 0.13
CNKSR3-204ENST00000479339 JARID2Q92833 1246 aaPredicted RBP15.84■□□□□ 0.13
CNKSR3-204ENST00000479339 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
CNKSR3-204ENST00000479339 TBC1D9Q6ZT07 1266 aa15.84■□□□□ 0.13
CNKSR3-204ENST00000479339 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
CNKSR3-204ENST00000479339 ERVV-2B6SEH9 535 aa15.83■□□□□ 0.12
CNKSR3-204ENST00000479339 SLFN14P0C7P3 912 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms