RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
FXR1-213ENST00000479176 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
FXR1-213ENST00000479176 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
FXR1-213ENST00000479176 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
FXR1-213ENST00000479176 POLD1P28340 1107 aa13.99□□□□□ -0.17
FXR1-213ENST00000479176 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
FXR1-213ENST00000479176 INTS5Q6P9B9 1019 aaKnown RBP13.99□□□□□ -0.17
FXR1-213ENST00000479176 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
FXR1-213ENST00000479176 ZNF496Q96IT1 587 aaPredicted RBP13.99□□□□□ -0.17
FXR1-213ENST00000479176 HEG1Q9ULI3 1381 aa13.98□□□□□ -0.17
FXR1-213ENST00000479176 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
FXR1-213ENST00000479176 WDR43Q15061 677 aaKnown RBP eCLIP13.98□□□□□ -0.17
FXR1-213ENST00000479176 TRAPPC3LQ5T215 181 aa13.98□□□□□ -0.17
FXR1-213ENST00000479176 MSL1Q68DK7 614 aa13.98□□□□□ -0.17
FXR1-213ENST00000479176 PDCD7Q8N8D1 485 aaKnown RBP13.98□□□□□ -0.17
FXR1-213ENST00000479176 FHDC1Q9C0D6 1143 aaPredicted RBP13.98□□□□□ -0.17
FXR1-213ENST00000479176 METRNQ9UJH8 293 aa13.98□□□□□ -0.17
FXR1-213ENST00000479176 KCNQ3O43525 872 aa13.97□□□□□ -0.17
FXR1-213ENST00000479176 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
FXR1-213ENST00000479176 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
FXR1-213ENST00000479176 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
FXR1-213ENST00000479176 TMPOP42166 694 aaKnown RBP13.96□□□□□ -0.17
FXR1-213ENST00000479176 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
FXR1-213ENST00000479176 FMNL2Q96PY5 1086 aa13.96□□□□□ -0.17
FXR1-213ENST00000479176 SYT17Q9BSW7 474 aa13.96□□□□□ -0.17
FXR1-213ENST00000479176 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
FXR1-213ENST00000479176 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
FXR1-213ENST00000479176 TEX13AQ9BXU3 409 aaPredicted RBP13.95□□□□□ -0.18
FXR1-213ENST00000479176 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
FXR1-213ENST00000479176 USP42Q9H9J4 1324 aaKnown RBP13.94□□□□□ -0.18
FXR1-213ENST00000479176 STARD3NLO95772 234 aa13.94□□□□□ -0.18
FXR1-213ENST00000479176 GYS1P13807 737 aa13.94□□□□□ -0.18
FXR1-213ENST00000479176 RIPK4P57078 832 aa13.94□□□□□ -0.18
FXR1-213ENST00000479176 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
FXR1-213ENST00000479176 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
FXR1-213ENST00000479176 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
FXR1-213ENST00000479176 ZBTB1Q9Y2K1 713 aa13.94□□□□□ -0.18
FXR1-213ENST00000479176 KIF13BQ9NQT8 1826 aa13.93□□□□□ -0.18
FXR1-213ENST00000479176 RFC4P35249 363 aa13.93□□□□□ -0.18
FXR1-213ENST00000479176 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
FXR1-213ENST00000479176 PNISRQ8TF01 805 aaKnown RBP13.93□□□□□ -0.18
FXR1-213ENST00000479176 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
FXR1-213ENST00000479176 COL15A1P39059 1388 aa13.93□□□□□ -0.18
FXR1-213ENST00000479176 ANP32CO43423 234 aa13.92□□□□□ -0.18
FXR1-213ENST00000479176 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
FXR1-213ENST00000479176 NLGN1Q8N2Q7 840 aa13.92□□□□□ -0.18
FXR1-213ENST00000479176 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
FXR1-213ENST00000479176 EIF5P55010 431 aaKnown RBP13.91□□□□□ -0.18
FXR1-213ENST00000479176 MIS18AQ9NYP9 233 aa13.91□□□□□ -0.18
FXR1-213ENST00000479176 SRP68Q9UHB9 627 aaKnown RBP13.91□□□□□ -0.18
FXR1-213ENST00000479176 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
FXR1-213ENST00000479176 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
FXR1-213ENST00000479176 G3V3G9 751 aa13.9□□□□□ -0.18
FXR1-213ENST00000479176 MMP10P09238 476 aa13.9□□□□□ -0.18
FXR1-213ENST00000479176 BABAM1Q9NWV8 329 aa13.9□□□□□ -0.18
FXR1-213ENST00000479176 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
FXR1-213ENST00000479176 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
FXR1-213ENST00000479176 USP16Q9Y5T5 823 aa13.9□□□□□ -0.18
FXR1-213ENST00000479176 BCORQ6W2J9 1755 aa13.89□□□□□ -0.19
FXR1-213ENST00000479176 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
FXR1-213ENST00000479176 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
FXR1-213ENST00000479176 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
FXR1-213ENST00000479176 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
FXR1-213ENST00000479176 NLGN2Q8NFZ4 835 aa13.89□□□□□ -0.19
FXR1-213ENST00000479176 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
FXR1-213ENST00000479176 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
FXR1-213ENST00000479176 A0A087WZG4 1122 aa13.88□□□□□ -0.19
FXR1-213ENST00000479176 POTEFA5A3E0 1075 aa13.88□□□□□ -0.19
FXR1-213ENST00000479176 ZPR1O75312 459 aa13.88□□□□□ -0.19
FXR1-213ENST00000479176 A1BGP04217 495 aa13.88□□□□□ -0.19
FXR1-213ENST00000479176 USPL1Q5W0Q7 1092 aa13.88□□□□□ -0.19
FXR1-213ENST00000479176 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
FXR1-213ENST00000479176 AFDNP55196 1824 aaKnown RBP13.87□□□□□ -0.19
FXR1-213ENST00000479176 NRXN2Q9P2S2 1712 aa13.87□□□□□ -0.19
FXR1-213ENST00000479176 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
FXR1-213ENST00000479176 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
FXR1-213ENST00000479176 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
FXR1-213ENST00000479176 BOLA1Q9Y3E2 137 aa13.87□□□□□ -0.19
FXR1-213ENST00000479176 TM4SF1P30408 202 aa13.86□□□□□ -0.19
FXR1-213ENST00000479176 DDR1Q08345 913 aa13.86□□□□□ -0.19
FXR1-213ENST00000479176 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
FXR1-213ENST00000479176 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
FXR1-213ENST00000479176 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
FXR1-213ENST00000479176 CHL1O00533 1208 aa13.85□□□□□ -0.19
FXR1-213ENST00000479176 APAF1O14727 1248 aa13.85□□□□□ -0.19
FXR1-213ENST00000479176 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
FXR1-213ENST00000479176 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
FXR1-213ENST00000479176 CHD4Q14839 1912 aa13.85□□□□□ -0.19
FXR1-213ENST00000479176 BRCA1P38398 1863 aaKnown RBP13.84□□□□□ -0.19
FXR1-213ENST00000479176 POLRMTO00411 1230 aaKnown RBP13.84□□□□□ -0.19
FXR1-213ENST00000479176 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
FXR1-213ENST00000479176 PARP3Q9Y6F1 533 aa13.84□□□□□ -0.19
FXR1-213ENST00000479176 PXDNLA1KZ92 1463 aa13.84□□□□□ -0.19
FXR1-213ENST00000479176 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.19
FXR1-213ENST00000479176 CAMTA2O94983 1202 aa13.83□□□□□ -0.2
FXR1-213ENST00000479176 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
FXR1-213ENST00000479176 NFIXQ14938 502 aa13.83□□□□□ -0.2
FXR1-213ENST00000479176 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
FXR1-213ENST00000479176 UTRNP46939 3433 aa13.83□□□□□ -0.2
FXR1-213ENST00000479176 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms