RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 ZNF219Q9P2Y4 722 aaPredicted RBP29.03■■■□□ 2.24
MCF2L2-210ENST00000478652 MAPK8IP3Q9UPT6 1336 aa29.02■■■□□ 2.24
MCF2L2-210ENST00000478652 LMNB1P20700 586 aa29.02■■■□□ 2.24
MCF2L2-210ENST00000478652 CLEC4GQ6UXB4 293 aa29.02■■■□□ 2.24
MCF2L2-210ENST00000478652 WDR90Q96KV7 1748 aa29.02■■■□□ 2.24
MCF2L2-210ENST00000478652 KDM2BQ8NHM5 1336 aa29.01■■■□□ 2.23
MCF2L2-210ENST00000478652 NPHP1O15259 732 aa29.01■■■□□ 2.23
MCF2L2-210ENST00000478652 EIF4A1P60842 406 aaKnown RBP29.01■■■□□ 2.23
MCF2L2-210ENST00000478652 ST5P78524 1137 aa29.01■■■□□ 2.23
MCF2L2-210ENST00000478652 DDX10Q13206 875 aaKnown RBP29.01■■■□□ 2.23
MCF2L2-210ENST00000478652 C21orf2O43822 256 aa29■■■□□ 2.23
MCF2L2-210ENST00000478652 RALBP1Q15311 655 aa29■■■□□ 2.23
MCF2L2-210ENST00000478652 PDZRN3Q9UPQ7 1066 aa29■■■□□ 2.23
MCF2L2-210ENST00000478652 HLFQ16534 295 aa28.99■■■□□ 2.23
MCF2L2-210ENST00000478652 NBPF5PQ86XG9 351 aaPredicted RBP28.99■■■□□ 2.23
MCF2L2-210ENST00000478652 PNISRQ8TF01 805 aaKnown RBP28.99■■■□□ 2.23
MCF2L2-210ENST00000478652 RRAGCQ9HB90 399 aa28.99■■■□□ 2.23
MCF2L2-210ENST00000478652 ZNF652Q9Y2D9 606 aa28.99■■■□□ 2.23
MCF2L2-210ENST00000478652 SRGNP10124 158 aa28.98■■■□□ 2.23
MCF2L2-210ENST00000478652 NIP7Q9Y221 180 aaKnown RBP eCLIP28.97■■■□□ 2.23
MCF2L2-210ENST00000478652 ZC3H4Q9UPT8 1303 aaKnown RBP28.96■■■□□ 2.23
MCF2L2-210ENST00000478652 STYK1Q6J9G0 422 aa28.96■■■□□ 2.23
MCF2L2-210ENST00000478652 NGEFQ8N5V2 710 aa28.96■■■□□ 2.23
MCF2L2-210ENST00000478652 PNNQ9H307 717 aaKnown RBP28.96■■■□□ 2.23
MCF2L2-210ENST00000478652 FAM177BA6PVY3 158 aa28.95■■■□□ 2.22
MCF2L2-210ENST00000478652 RBM46Q8TBY0 533 aaKnown RBP28.95■■■□□ 2.22
MCF2L2-210ENST00000478652 PRPF40BQ6NWY9 871 aaKnown RBP28.94■■■□□ 2.22
MCF2L2-210ENST00000478652 RGL2O15211 777 aa28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 TTLL7Q6ZT98 887 aa28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 C16orf71Q8IYS4 520 aaPredicted RBP28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 CNKSR1Q969H4 720 aa28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 MASTLQ96GX5 879 aa28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 RRP7AQ9Y3A4 280 aaKnown RBP28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 MYBBP1AQ9BQG0 1328 aaKnown RBP28.93■■■□□ 2.22
MCF2L2-210ENST00000478652 RIPK4P57078 832 aa28.92■■■□□ 2.22
MCF2L2-210ENST00000478652 GLTPD2A6NH11 291 aa28.91■■■□□ 2.22
MCF2L2-210ENST00000478652 MYL6BP14649 208 aa28.91■■■□□ 2.22
MCF2L2-210ENST00000478652 ANKRD36CQ5JPF3 1778 aa28.9■■■□□ 2.22
MCF2L2-210ENST00000478652 TMPOP42166 694 aaKnown RBP28.9■■■□□ 2.22
MCF2L2-210ENST00000478652 APLP1P51693 650 aa28.9■■■□□ 2.22
MCF2L2-210ENST00000478652 MAP3K15Q6ZN16 1313 aa28.9■■■□□ 2.22
MCF2L2-210ENST00000478652 ABCC12Q96J65 1359 aa28.89■■■□□ 2.22
MCF2L2-210ENST00000478652 TPTE2Q6XPS3 522 aa28.89■■■□□ 2.22
MCF2L2-210ENST00000478652 TSPYL4Q9UJ04 414 aa28.89■■■□□ 2.22
MCF2L2-210ENST00000478652 LTBP3Q9NS15 1303 aa28.89■■■□□ 2.21
MCF2L2-210ENST00000478652 KLRG2A4D1S0 409 aaPredicted RBP28.88■■■□□ 2.21
MCF2L2-210ENST00000478652 CCDC146Q8IYE0 955 aa28.88■■■□□ 2.21
MCF2L2-210ENST00000478652 TAOK3Q9H2K8 898 aa28.88■■■□□ 2.21
MCF2L2-210ENST00000478652 ERVV-1B6SEH8 477 aa28.86■■■□□ 2.21
MCF2L2-210ENST00000478652 NPR1P16066 1061 aa28.86■■■□□ 2.21
MCF2L2-210ENST00000478652 C7orf43Q8WVR3 580 aa28.86■■■□□ 2.21
MCF2L2-210ENST00000478652 ZBTB3Q9H5J0 574 aa28.86■■■□□ 2.21
MCF2L2-210ENST00000478652 UBN2Q6ZU65 1347 aa28.86■■■□□ 2.21
MCF2L2-210ENST00000478652 ERFEQ4G0M1 354 aa28.85■■■□□ 2.21
MCF2L2-210ENST00000478652 NUTM1Q86Y26 1132 aa28.85■■■□□ 2.21
MCF2L2-210ENST00000478652 HTRA3P83110 453 aa28.84■■■□□ 2.21
MCF2L2-210ENST00000478652 FSTL1Q12841 308 aa28.84■■■□□ 2.21
MCF2L2-210ENST00000478652 OLFM4Q6UX06 510 aa28.84■■■□□ 2.21
MCF2L2-210ENST00000478652 KIF6Q6ZMV9 814 aa28.84■■■□□ 2.21
MCF2L2-210ENST00000478652 LRP10Q7Z4F1 713 aa28.84■■■□□ 2.21
MCF2L2-210ENST00000478652 LAMB2P55268 1798 aa28.83■■■□□ 2.21
MCF2L2-210ENST00000478652 POTECB2RU33 542 aa28.83■■■□□ 2.21
MCF2L2-210ENST00000478652 GPTP24298 496 aa28.83■■■□□ 2.21
MCF2L2-210ENST00000478652 PDIA6Q15084 440 aa28.82■■■□□ 2.2
MCF2L2-210ENST00000478652 NEUROD2Q15784 382 aa28.82■■■□□ 2.2
MCF2L2-210ENST00000478652 DNAJC5GQ8N7S2 189 aa28.82■■■□□ 2.2
MCF2L2-210ENST00000478652 ERBB4Q15303 1308 aa28.82■■■□□ 2.2
MCF2L2-210ENST00000478652 ANXA1P04083 346 aa28.81■■■□□ 2.2
MCF2L2-210ENST00000478652 VEGFAP15692 232 aaPredicted RBP28.81■■■□□ 2.2
MCF2L2-210ENST00000478652 EIF2S2P20042 333 aaKnown RBP28.81■■■□□ 2.2
MCF2L2-210ENST00000478652 GTF2E1P29083 439 aaPredicted RBP28.81■■■□□ 2.2
MCF2L2-210ENST00000478652 PROSER3Q2NL68 480 aa28.81■■■□□ 2.2
MCF2L2-210ENST00000478652 SOGA3Q5TF21 947 aa28.81■■■□□ 2.2
MCF2L2-210ENST00000478652 LMOD3Q0VAK6 560 aa28.8■■■□□ 2.2
MCF2L2-210ENST00000478652 CCDC93Q567U6 631 aa28.8■■■□□ 2.2
MCF2L2-210ENST00000478652 IBTKQ9P2D0 1353 aaPredicted RBP28.79■■■□□ 2.2
MCF2L2-210ENST00000478652 SUSD4Q5VX71 490 aa28.79■■■□□ 2.2
MCF2L2-210ENST00000478652 SMC1BQ8NDV3 1235 aa28.79■■■□□ 2.2
MCF2L2-210ENST00000478652 RIC1Q4ADV7 1423 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 SNED1Q8TER0 1413 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 KRT24Q2M2I5 525 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 ZNF34Q8IZ26 560 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 NYXQ9GZU5 481 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 BABAM1Q9NWV8 329 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 TRIM35Q9UPQ4 493 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 SCN4AP35499 1836 aa28.78■■■□□ 2.2
MCF2L2-210ENST00000478652 CRY2Q49AN0 593 aa28.77■■■□□ 2.2
MCF2L2-210ENST00000478652 DPY19L2Q6NUT2 758 aa28.77■■■□□ 2.2
MCF2L2-210ENST00000478652 GIGYF2Q6Y7W6 1299 aaKnown RBP28.77■■■□□ 2.2
MCF2L2-210ENST00000478652 NECTIN2Q92692 538 aa28.77■■■□□ 2.2
MCF2L2-210ENST00000478652 RUNDC1Q96C34 613 aa28.77■■■□□ 2.2
MCF2L2-210ENST00000478652 ADAMTS8Q9UP79 889 aa28.77■■■□□ 2.2
MCF2L2-210ENST00000478652 NTSR2O95665 410 aa28.76■■■□□ 2.19
MCF2L2-210ENST00000478652 WDR43Q15061 677 aaKnown RBP eCLIP28.76■■■□□ 2.19
MCF2L2-210ENST00000478652 DDNO94850 711 aaPredicted RBP28.75■■■□□ 2.19
MCF2L2-210ENST00000478652 PRKRIP1Q9H875 184 aaPredicted RBP28.75■■■□□ 2.19
MCF2L2-210ENST00000478652 FKBP4Q02790 459 aaKnown RBP eCLIP28.74■■■□□ 2.19
MCF2L2-210ENST00000478652 SLC51AQ86UW1 340 aa28.74■■■□□ 2.19
MCF2L2-210ENST00000478652 ZNF277Q9NRM2 450 aaPredicted RBP28.74■■■□□ 2.19
MCF2L2-210ENST00000478652 TAF1P21675 1872 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms