RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
SREBF1-212ENST00000478616 ANXA1P04083 346 aa24.61■■□□□ 1.53
SREBF1-212ENST00000478616 PIM2Q9P1W9 311 aa24.61■■□□□ 1.53
SREBF1-212ENST00000478616 ARFGEF2Q9Y6D5 1785 aa24.61■■□□□ 1.53
SREBF1-212ENST00000478616 RGL2O15211 777 aa24.6■■□□□ 1.53
SREBF1-212ENST00000478616 NGEFQ8N5V2 710 aa24.6■■□□□ 1.53
SREBF1-212ENST00000478616 ERBB4Q15303 1308 aa24.6■■□□□ 1.53
SREBF1-212ENST00000478616 SLX4Q8IY92 1834 aa24.59■■□□□ 1.53
SREBF1-212ENST00000478616 MYL6BP14649 208 aa24.59■■□□□ 1.53
SREBF1-212ENST00000478616 SETDB2Q96T68 719 aa24.59■■□□□ 1.53
SREBF1-212ENST00000478616 ANKRD36CQ5JPF3 1778 aa24.59■■□□□ 1.53
SREBF1-212ENST00000478616 CFAP44Q96MT7 982 aa24.58■■□□□ 1.53
SREBF1-212ENST00000478616 MBIPQ9NS73 344 aa24.58■■□□□ 1.53
SREBF1-212ENST00000478616 ATP10DQ9P241 1426 aa24.58■■□□□ 1.53
SREBF1-212ENST00000478616 MAP3K15Q6ZN16 1313 aa24.58■■□□□ 1.52
SREBF1-212ENST00000478616 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
SREBF1-212ENST00000478616 DALRD3Q5D0E6 543 aaKnown RBP24.57■■□□□ 1.52
SREBF1-212ENST00000478616 C2CD5Q86YS7 1000 aa24.57■■□□□ 1.52
SREBF1-212ENST00000478616 BRIP1Q9BX63 1249 aa24.57■■□□□ 1.52
SREBF1-212ENST00000478616 LAS1LQ9Y4W2 734 aaKnown RBP24.57■■□□□ 1.52
SREBF1-212ENST00000478616 CCDC88AQ3V6T2 1871 aa24.57■■□□□ 1.52
SREBF1-212ENST00000478616 ERVV-1B6SEH8 477 aa24.56■■□□□ 1.52
SREBF1-212ENST00000478616 PRELPP51888 382 aa24.56■■□□□ 1.52
SREBF1-212ENST00000478616 MRS2Q9HD23 443 aa24.56■■□□□ 1.52
SREBF1-212ENST00000478616 UBN2Q6ZU65 1347 aa24.56■■□□□ 1.52
SREBF1-212ENST00000478616 ANP32CO43423 234 aa24.55■■□□□ 1.52
SREBF1-212ENST00000478616 CNBD1Q8NA66 436 aa24.55■■□□□ 1.52
SREBF1-212ENST00000478616 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
SREBF1-212ENST00000478616 NIP7Q9Y221 180 aaKnown RBP eCLIP24.55■■□□□ 1.52
SREBF1-212ENST00000478616 FER1L6Q2WGJ9 1857 aa24.55■■□□□ 1.52
SREBF1-212ENST00000478616 NPM2Q86SE8 214 aaKnown RBP24.54■■□□□ 1.52
SREBF1-212ENST00000478616 ZBTB3Q9H5J0 574 aa24.54■■□□□ 1.52
SREBF1-212ENST00000478616 ARHGAP27Q6ZUM4 889 aa24.53■■□□□ 1.52
SREBF1-212ENST00000478616 ZNF652Q9Y2D9 606 aa24.53■■□□□ 1.52
SREBF1-212ENST00000478616 ABCC12Q96J65 1359 aa24.53■■□□□ 1.52
SREBF1-212ENST00000478616 KLRG2A4D1S0 409 aaPredicted RBP24.52■■□□□ 1.52
SREBF1-212ENST00000478616 ZNF34Q8IZ26 560 aa24.52■■□□□ 1.52
SREBF1-212ENST00000478616 IFT57Q9NWB7 429 aa24.52■■□□□ 1.52
SREBF1-212ENST00000478616 H0YIN7 160 aa24.5■■□□□ 1.51
SREBF1-212ENST00000478616 SRGNP10124 158 aa24.5■■□□□ 1.51
SREBF1-212ENST00000478616 NBPF5PQ86XG9 351 aaPredicted RBP24.5■■□□□ 1.51
SREBF1-212ENST00000478616 CHPF2Q9P2E5 772 aa24.5■■□□□ 1.51
SREBF1-212ENST00000478616 FAM177BA6PVY3 158 aa24.49■■□□□ 1.51
SREBF1-212ENST00000478616 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
SREBF1-212ENST00000478616 GIGYF2Q6Y7W6 1299 aaKnown RBP24.49■■□□□ 1.51
SREBF1-212ENST00000478616 TTLL6Q8N841 843 aa24.49■■□□□ 1.51
SREBF1-212ENST00000478616 DDX21Q9NR30 783 aaKnown RBP eCLIP24.49■■□□□ 1.51
SREBF1-212ENST00000478616 LAMB2P55268 1798 aa24.49■■□□□ 1.51
SREBF1-212ENST00000478616 HOXB7P09629 217 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 GPTP24298 496 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 PDE6BP35913 854 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 CCDC27Q2M243 656 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 SUSD4Q5VX71 490 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 COPS6Q7L5N1 327 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 WWC1Q8IX03 1113 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 C8orf58Q8NAV2 365 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 XAGE3Q8WTP9 111 aa24.48■■□□□ 1.51
SREBF1-212ENST00000478616 NFKBIEO00221 500 aa24.47■■□□□ 1.51
SREBF1-212ENST00000478616 RASSF7Q02833 373 aa24.47■■□□□ 1.51
SREBF1-212ENST00000478616 KIF6Q6ZMV9 814 aa24.47■■□□□ 1.51
SREBF1-212ENST00000478616 NUTM1Q86Y26 1132 aa24.47■■□□□ 1.51
SREBF1-212ENST00000478616 IBTKQ9P2D0 1353 aaPredicted RBP24.46■■□□□ 1.51
SREBF1-212ENST00000478616 DICER1Q9UPY3 1922 aaKnown RBP24.46■■□□□ 1.51
SREBF1-212ENST00000478616 NTSR2O95665 410 aa24.46■■□□□ 1.51
SREBF1-212ENST00000478616 GNAI1P63096 354 aa24.46■■□□□ 1.51
SREBF1-212ENST00000478616 ST5P78524 1137 aa24.46■■□□□ 1.51
SREBF1-212ENST00000478616 ERFEQ4G0M1 354 aa24.45■■□□□ 1.5
SREBF1-212ENST00000478616 HDGFL1Q5TGJ6 251 aa24.45■■□□□ 1.5
SREBF1-212ENST00000478616 TSPYL6Q8N831 410 aa24.45■■□□□ 1.5
SREBF1-212ENST00000478616 ZNF622Q969S3 477 aaKnown RBP eCLIP24.45■■□□□ 1.5
SREBF1-212ENST00000478616 RIC1Q4ADV7 1423 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 TIAM2Q8IVF5 1701 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 C9orf131Q5VYM1 1079 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 STYK1Q6J9G0 422 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 TPTE2Q6XPS3 522 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 C3orf67Q6ZVT6 689 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 C7orf43Q8WVR3 580 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 PDZRN3Q9UPQ7 1066 aa24.44■■□□□ 1.5
SREBF1-212ENST00000478616 AIMP1Q12904 312 aaKnown RBP24.43■■□□□ 1.5
SREBF1-212ENST00000478616 NCBP3Q53F19 620 aaKnown RBP24.43■■□□□ 1.5
SREBF1-212ENST00000478616 TSR2Q969E8 191 aaKnown RBP24.43■■□□□ 1.5
SREBF1-212ENST00000478616 SNED1Q8TER0 1413 aa24.43■■□□□ 1.5
SREBF1-212ENST00000478616 DDX60Q8IY21 1712 aaKnown RBP24.42■■□□□ 1.5
SREBF1-212ENST00000478616 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
SREBF1-212ENST00000478616 SLC51AQ86UW1 340 aa24.42■■□□□ 1.5
SREBF1-212ENST00000478616 MASTLQ96GX5 879 aa24.42■■□□□ 1.5
SREBF1-212ENST00000478616 CRY2Q49AN0 593 aa24.41■■□□□ 1.5
SREBF1-212ENST00000478616 PRPF40BQ6NWY9 871 aaKnown RBP24.41■■□□□ 1.5
SREBF1-212ENST00000478616 C21orf2O43822 256 aa24.4■■□□□ 1.5
SREBF1-212ENST00000478616 ZNF526Q8TF50 670 aaPredicted RBP24.4■■□□□ 1.5
SREBF1-212ENST00000478616 ZNF219Q9P2Y4 722 aaPredicted RBP24.4■■□□□ 1.5
SREBF1-212ENST00000478616 TAF1P21675 1872 aa24.4■■□□□ 1.5
SREBF1-212ENST00000478616 CALD1Q05682 793 aaKnown RBP24.39■■□□□ 1.49
SREBF1-212ENST00000478616 OLFM4Q6UX06 510 aa24.39■■□□□ 1.49
SREBF1-212ENST00000478616 SYNE4Q8N205 404 aa24.39■■□□□ 1.49
SREBF1-212ENST00000478616 SPINK5Q9NQ38 1064 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-212ENST00000478616 DBF4Q9UBU7 674 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-212ENST00000478616 NLRP10Q86W26 655 aa24.38■■□□□ 1.49
SREBF1-212ENST00000478616 PHAXQ9H814 394 aaKnown RBP24.38■■□□□ 1.49
SREBF1-212ENST00000478616 KIF3CO14782 793 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms