RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 BCAR3O75815 825 aa15□□□□□ -0.01
PDCD11-204ENST00000478543 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
PDCD11-204ENST00000478543 GYS1P13807 737 aa15□□□□□ -0.01
PDCD11-204ENST00000478543 ATP6V1AP38606 617 aa15□□□□□ -0.01
PDCD11-204ENST00000478543 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
PDCD11-204ENST00000478543 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
PDCD11-204ENST00000478543 SSH1Q8WYL5 1049 aa15□□□□□ -0.01
PDCD11-204ENST00000478543 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
PDCD11-204ENST00000478543 SUPT16HQ9Y5B9 1047 aaKnown RBP15□□□□□ -0.01
PDCD11-204ENST00000478543 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
PDCD11-204ENST00000478543 MYH14Q7Z406 1995 aaKnown RBP14.99□□□□□ -0.01
PDCD11-204ENST00000478543 HOXB7P09629 217 aa14.99□□□□□ -0.01
PDCD11-204ENST00000478543 ARHGEF1Q92888 912 aaKnown RBP14.99□□□□□ -0.01
PDCD11-204ENST00000478543 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
PDCD11-204ENST00000478543 RNF181Q9P0P0 153 aa14.98□□□□□ -0.01
PDCD11-204ENST00000478543 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
PDCD11-204ENST00000478543 TJP1Q07157 1748 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 SLC34A2O95436 690 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 HMGB2P26583 209 aaKnown RBP14.97□□□□□ -0.01
PDCD11-204ENST00000478543 ALDH1L2Q3SY69 923 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 CCDC30Q5VVM6 783 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 DNAJC10Q8IXB1 793 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 ZNF428Q96B54 188 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
PDCD11-204ENST00000478543 KDM2BQ8NHM5 1336 aa14.96□□□□□ -0.01
PDCD11-204ENST00000478543 TRAPPC3LQ5T215 181 aa14.96□□□□□ -0.01
PDCD11-204ENST00000478543 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
PDCD11-204ENST00000478543 NLGN1Q8N2Q7 840 aa14.96□□□□□ -0.01
PDCD11-204ENST00000478543 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.01
PDCD11-204ENST00000478543 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
PDCD11-204ENST00000478543 CCDC87Q9NVE4 849 aa14.96□□□□□ -0.01
PDCD11-204ENST00000478543 PLIN1O60240 522 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 ANXA1P04083 346 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
PDCD11-204ENST00000478543 CHRNA5P30532 468 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 PIP4K2AP48426 406 aaPredicted RBP14.95□□□□□ -0.02
PDCD11-204ENST00000478543 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
PDCD11-204ENST00000478543 RASSF7Q02833 373 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 DDR1Q08345 913 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
PDCD11-204ENST00000478543 CHPF2Q9P2E5 772 aa14.95□□□□□ -0.02
PDCD11-204ENST00000478543 RTCBQ9Y3I0 505 aaKnown RBP14.95□□□□□ -0.02
PDCD11-204ENST00000478543 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
PDCD11-204ENST00000478543 TIAM2Q8IVF5 1701 aa14.93□□□□□ -0.02
PDCD11-204ENST00000478543 A1BGP04217 495 aa14.93□□□□□ -0.02
PDCD11-204ENST00000478543 PROSER3Q2NL68 480 aa14.93□□□□□ -0.02
PDCD11-204ENST00000478543 TEX13AQ9BXU3 409 aaPredicted RBP14.93□□□□□ -0.02
PDCD11-204ENST00000478543 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
PDCD11-204ENST00000478543 PIM2Q9P1W9 311 aa14.93□□□□□ -0.02
PDCD11-204ENST00000478543 SRP68Q9UHB9 627 aaKnown RBP14.93□□□□□ -0.02
PDCD11-204ENST00000478543 NOB1Q9ULX3 412 aaKnown RBP14.93□□□□□ -0.02
PDCD11-204ENST00000478543 PARP3Q9Y6F1 533 aa14.93□□□□□ -0.02
PDCD11-204ENST00000478543 POTECB2RU33 542 aa14.92□□□□□ -0.02
PDCD11-204ENST00000478543 MYL6BP14649 208 aa14.92□□□□□ -0.02
PDCD11-204ENST00000478543 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
PDCD11-204ENST00000478543 G2E3Q7L622 706 aa14.92□□□□□ -0.02
PDCD11-204ENST00000478543 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.92□□□□□ -0.02
PDCD11-204ENST00000478543 KIF16BQ96L93 1317 aa14.92□□□□□ -0.02
PDCD11-204ENST00000478543 STARD3NLO95772 234 aa14.91□□□□□ -0.02
PDCD11-204ENST00000478543 CYP19A1P11511 503 aaPredicted RBP14.91□□□□□ -0.02
PDCD11-204ENST00000478543 IRX6P78412 446 aaPredicted RBP14.91□□□□□ -0.02
PDCD11-204ENST00000478543 FKBP8Q14318 412 aa14.91□□□□□ -0.02
PDCD11-204ENST00000478543 PDIA6Q15084 440 aa14.91□□□□□ -0.02
PDCD11-204ENST00000478543 PHAXQ9H814 394 aaKnown RBP14.91□□□□□ -0.02
PDCD11-204ENST00000478543 DDX21Q9NR30 783 aaKnown RBP eCLIP14.91□□□□□ -0.02
PDCD11-204ENST00000478543 DBF4Q9UBU7 674 aaPredicted RBP14.91□□□□□ -0.02
PDCD11-204ENST00000478543 TNNQ9UQP3 1299 aa14.91□□□□□ -0.02
PDCD11-204ENST00000478543 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
PDCD11-204ENST00000478543 CNTNAP4Q9C0A0 1308 aa14.91□□□□□ -0.02
PDCD11-204ENST00000478543 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
PDCD11-204ENST00000478543 CCDC88AQ3V6T2 1871 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 NBPF26B4DH59 902 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 ADRA2BP18089 450 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 RFC4P35249 363 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 CRKLP46109 303 aaKnown RBP14.89□□□□□ -0.03
PDCD11-204ENST00000478543 BRPF1P55201 1214 aaPredicted RBP14.89□□□□□ -0.03
PDCD11-204ENST00000478543 RC3H1Q5TC82 1133 aaKnown RBP14.89□□□□□ -0.03
PDCD11-204ENST00000478543 ZKSCAN2Q63HK3 967 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 NBPF10Q6P3W6 841 aaKnown RBP14.89□□□□□ -0.03
PDCD11-204ENST00000478543 NBPF15Q8N660 670 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 HYPKQ9NX55 129 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 ZBTB1Q9Y2K1 713 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
PDCD11-204ENST00000478543 ERBB4Q15303 1308 aa14.89□□□□□ -0.03
PDCD11-204ENST00000478543 AFDNP55196 1824 aaKnown RBP14.88□□□□□ -0.03
PDCD11-204ENST00000478543 GLTPD2A6NH11 291 aa14.88□□□□□ -0.03
PDCD11-204ENST00000478543 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
PDCD11-204ENST00000478543 AIMP1Q12904 312 aaKnown RBP14.88□□□□□ -0.03
PDCD11-204ENST00000478543 FLIIQ13045 1269 aa14.88□□□□□ -0.03
PDCD11-204ENST00000478543 CLUAP1Q96AJ1 413 aa14.88□□□□□ -0.03
PDCD11-204ENST00000478543 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
PDCD11-204ENST00000478543 POLRMTO00411 1230 aaKnown RBP14.87□□□□□ -0.03
PDCD11-204ENST00000478543 FOXN1O15353 648 aa14.87□□□□□ -0.03
PDCD11-204ENST00000478543 TRIM27P14373 513 aa14.87□□□□□ -0.03
PDCD11-204ENST00000478543 FKBP5Q13451 457 aaPredicted RBP14.87□□□□□ -0.03
PDCD11-204ENST00000478543 C20orf194Q5TEA3 1177 aa14.87□□□□□ -0.03
PDCD11-204ENST00000478543 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
PDCD11-204ENST00000478543 USP42Q9H9J4 1324 aaKnown RBP14.87□□□□□ -0.03
PDCD11-204ENST00000478543 NEFLP07196 543 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms