RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 RARSP54136 660 aaKnown RBP23.28■■□□□ 1.32
PLOD3-213ENST00000478264 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
PLOD3-213ENST00000478264 SMC4Q9NTJ3 1288 aa23.28■■□□□ 1.32
PLOD3-213ENST00000478264 ERVV-1B6SEH8 477 aa23.27■■□□□ 1.32
PLOD3-213ENST00000478264 GYS1P13807 737 aa23.27■■□□□ 1.32
PLOD3-213ENST00000478264 FLIIQ13045 1269 aa23.27■■□□□ 1.32
PLOD3-213ENST00000478264 BCL2L13Q9BXK5 485 aa23.27■■□□□ 1.32
PLOD3-213ENST00000478264 ZNF652Q9Y2D9 606 aa23.27■■□□□ 1.32
PLOD3-213ENST00000478264 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
PLOD3-213ENST00000478264 G2E3Q7L622 706 aa23.26■■□□□ 1.31
PLOD3-213ENST00000478264 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
PLOD3-213ENST00000478264 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
PLOD3-213ENST00000478264 CLEC4GQ6UXB4 293 aa23.25■■□□□ 1.31
PLOD3-213ENST00000478264 BCL2L12Q9HB09 334 aa23.25■■□□□ 1.31
PLOD3-213ENST00000478264 ZBTB7AO95365 584 aa23.24■■□□□ 1.31
PLOD3-213ENST00000478264 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
PLOD3-213ENST00000478264 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
PLOD3-213ENST00000478264 NLGN1Q8N2Q7 840 aa23.24■■□□□ 1.31
PLOD3-213ENST00000478264 PLBD2Q8NHP8 589 aa23.24■■□□□ 1.31
PLOD3-213ENST00000478264 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
PLOD3-213ENST00000478264 ARFGEF2Q9Y6D5 1785 aa23.23■■□□□ 1.31
PLOD3-213ENST00000478264 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
PLOD3-213ENST00000478264 FKBP8Q14318 412 aa23.23■■□□□ 1.31
PLOD3-213ENST00000478264 HLFQ16534 295 aa23.22■■□□□ 1.31
PLOD3-213ENST00000478264 MSL1Q68DK7 614 aa23.22■■□□□ 1.31
PLOD3-213ENST00000478264 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
PLOD3-213ENST00000478264 RIC3Q7Z5B4 369 aa23.22■■□□□ 1.31
PLOD3-213ENST00000478264 PTPRCP08575 1304 aa23.22■■□□□ 1.31
PLOD3-213ENST00000478264 KIF16BQ96L93 1317 aa23.22■■□□□ 1.31
PLOD3-213ENST00000478264 ATP10DQ9P241 1426 aa23.22■■□□□ 1.31
PLOD3-213ENST00000478264 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
PLOD3-213ENST00000478264 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
PLOD3-213ENST00000478264 NUP98P52948 1817 aa23.2■■□□□ 1.3
PLOD3-213ENST00000478264 ADCY9O60503 1353 aa23.2■■□□□ 1.3
PLOD3-213ENST00000478264 ANKRD36CQ5JPF3 1778 aa23.19■■□□□ 1.3
PLOD3-213ENST00000478264 PI4KAP2A4QPH2 592 aa23.19■■□□□ 1.3
PLOD3-213ENST00000478264 BCAR3O75815 825 aa23.19■■□□□ 1.3
PLOD3-213ENST00000478264 PI4KAP1Q8N8J0 262 aa23.19■■□□□ 1.3
PLOD3-213ENST00000478264 RCAN3Q9UKA8 241 aa23.19■■□□□ 1.3
PLOD3-213ENST00000478264 TBC1D9BQ66K14 1250 aa23.18■■□□□ 1.3
PLOD3-213ENST00000478264 ATF5Q9Y2D1 282 aaPredicted RBP23.18■■□□□ 1.3
PLOD3-213ENST00000478264 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
PLOD3-213ENST00000478264 POLD1P28340 1107 aa23.17■■□□□ 1.3
PLOD3-213ENST00000478264 NFIXQ14938 502 aa23.17■■□□□ 1.3
PLOD3-213ENST00000478264 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
PLOD3-213ENST00000478264 NOB1Q9ULX3 412 aaKnown RBP23.17■■□□□ 1.3
PLOD3-213ENST00000478264 CARMIL3Q8ND23 1372 aa23.16■■□□□ 1.3
PLOD3-213ENST00000478264 MMP10P09238 476 aa23.16■■□□□ 1.3
PLOD3-213ENST00000478264 TM4SF1P30408 202 aa23.16■■□□□ 1.3
PLOD3-213ENST00000478264 TCIRG1Q13488 830 aa23.16■■□□□ 1.3
PLOD3-213ENST00000478264 DNAAF4Q8WXU2 420 aa23.16■■□□□ 1.3
PLOD3-213ENST00000478264 NIP7Q9Y221 180 aaKnown RBP eCLIP23.16■■□□□ 1.3
PLOD3-213ENST00000478264 BICDL1Q6ZP65 573 aa23.15■■□□□ 1.3
PLOD3-213ENST00000478264 ZNF34Q8IZ26 560 aa23.15■■□□□ 1.3
PLOD3-213ENST00000478264 SETDB2Q96T68 719 aa23.15■■□□□ 1.3
PLOD3-213ENST00000478264 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
PLOD3-213ENST00000478264 METTL22Q9BUU2 404 aaPredicted RBP23.15■■□□□ 1.3
PLOD3-213ENST00000478264 PXDNLA1KZ92 1463 aa23.14■■□□□ 1.29
PLOD3-213ENST00000478264 NEXNQ0ZGT2 675 aa23.14■■□□□ 1.29
PLOD3-213ENST00000478264 ARHGAP45Q92619 1136 aa23.14■■□□□ 1.29
PLOD3-213ENST00000478264 MYD88Q99836 296 aa23.14■■□□□ 1.29
PLOD3-213ENST00000478264 API5Q9BZZ5 524 aaKnown RBP23.14■■□□□ 1.29
PLOD3-213ENST00000478264 POLRMTO00411 1230 aaKnown RBP23.13■■□□□ 1.29
PLOD3-213ENST00000478264 IPO8O15397 1037 aaKnown RBP23.13■■□□□ 1.29
PLOD3-213ENST00000478264 GPTP24298 496 aa23.13■■□□□ 1.29
PLOD3-213ENST00000478264 PTGER2P43116 358 aa23.13■■□□□ 1.29
PLOD3-213ENST00000478264 DDR1Q08345 913 aa23.13■■□□□ 1.29
PLOD3-213ENST00000478264 PARP10Q53GL7 1025 aa23.13■■□□□ 1.29
PLOD3-213ENST00000478264 FRAT1Q92837 279 aaPredicted RBP23.13■■□□□ 1.29
PLOD3-213ENST00000478264 ISCA1Q9BUE6 129 aa23.13■■□□□ 1.29
PLOD3-213ENST00000478264 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
PLOD3-213ENST00000478264 UBN2Q6ZU65 1347 aa23.12■■□□□ 1.29
PLOD3-213ENST00000478264 F6X3S4 739 aa23.12■■□□□ 1.29
PLOD3-213ENST00000478264 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
PLOD3-213ENST00000478264 NRXN2Q9P2S2 1712 aa23.11■■□□□ 1.29
PLOD3-213ENST00000478264 ZKSCAN2Q63HK3 967 aa23.11■■□□□ 1.29
PLOD3-213ENST00000478264 LRP5O75197 1615 aa23.11■■□□□ 1.29
PLOD3-213ENST00000478264 ATP5J2-PTCD1G3V325 749 aa23.1■■□□□ 1.29
PLOD3-213ENST00000478264 TRIM28Q13263 835 aaKnown RBP23.1■■□□□ 1.29
PLOD3-213ENST00000478264 ATF7IPQ6VMQ6 1270 aa23.1■■□□□ 1.29
PLOD3-213ENST00000478264 SERPINB2P05120 415 aa23.09■■□□□ 1.29
PLOD3-213ENST00000478264 SLC4A10Q6U841 1118 aa23.09■■□□□ 1.29
PLOD3-213ENST00000478264 NLRP10Q86W26 655 aa23.09■■□□□ 1.29
PLOD3-213ENST00000478264 LINS1Q8NG48 757 aa23.09■■□□□ 1.29
PLOD3-213ENST00000478264 IGKV5-2P06315 115 aa23.08■■□□□ 1.29
PLOD3-213ENST00000478264 TRIM27P14373 513 aa23.08■■□□□ 1.29
PLOD3-213ENST00000478264 BEND3Q5T5X7 828 aa23.08■■□□□ 1.29
PLOD3-213ENST00000478264 PPP1R42Q7Z4L9 355 aa23.08■■□□□ 1.29
PLOD3-213ENST00000478264 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
PLOD3-213ENST00000478264 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.29
PLOD3-213ENST00000478264 NYXQ9GZU5 481 aa23.08■■□□□ 1.29
PLOD3-213ENST00000478264 N4BP2Q86UW6 1770 aaPredicted RBP23.08■■□□□ 1.29
PLOD3-213ENST00000478264 AFDNP55196 1824 aaKnown RBP23.08■■□□□ 1.28
PLOD3-213ENST00000478264 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.28
PLOD3-213ENST00000478264 SUSD4Q5VX71 490 aa23.07■■□□□ 1.28
PLOD3-213ENST00000478264 CNBD1Q8NA66 436 aa23.07■■□□□ 1.28
PLOD3-213ENST00000478264 CWC25Q9NXE8 425 aaPredicted RBP23.07■■□□□ 1.28
PLOD3-213ENST00000478264 ABCC4O15439 1325 aa23.07■■□□□ 1.28
PLOD3-213ENST00000478264 SRCAPQ6ZRS2 3230 aa23.06■■□□□ 1.28
PLOD3-213ENST00000478264 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms