RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 C1orf53Q5VUE5 145 aa9.41□□□□□ -0.9
LMBR1-216ENST00000477983 GLMNQ92990 594 aa9.41□□□□□ -0.9
LMBR1-216ENST00000477983 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
LMBR1-216ENST00000477983 STRN4Q9NRL3 753 aa9.41□□□□□ -0.9
LMBR1-216ENST00000477983 A6NJR5 290 aa9.4□□□□□ -0.9
LMBR1-216ENST00000477983 AMPD1P23109 780 aa9.4□□□□□ -0.9
LMBR1-216ENST00000477983 SH3PXD2AQ5TCZ1 1133 aa9.4□□□□□ -0.9
LMBR1-216ENST00000477983 ZNF468Q5VIY5 522 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-216ENST00000477983 FCHSD1Q86WN1 690 aa9.4□□□□□ -0.9
LMBR1-216ENST00000477983 TSPAN10Q9H1Z9 355 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-216ENST00000477983 TFIP11Q9UBB9 837 aaKnown RBP9.4□□□□□ -0.9
LMBR1-216ENST00000477983 ZNF232Q9UNY5 417 aa9.4□□□□□ -0.9
LMBR1-216ENST00000477983 MSTNO14793 375 aa9.39□□□□□ -0.91
LMBR1-216ENST00000477983 COL8A1P27658 744 aa9.39□□□□□ -0.91
LMBR1-216ENST00000477983 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
LMBR1-216ENST00000477983 KRBA1A5PL33 1030 aa9.38□□□□□ -0.91
LMBR1-216ENST00000477983 PIK3R2O00459 728 aa9.38□□□□□ -0.91
LMBR1-216ENST00000477983 DGKGP49619 791 aa9.38□□□□□ -0.91
LMBR1-216ENST00000477983 MAFBQ9Y5Q3 323 aaPredicted RBP9.38□□□□□ -0.91
LMBR1-216ENST00000477983 CHSY3Q70JA7 882 aa9.37□□□□□ -0.91
LMBR1-216ENST00000477983 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
LMBR1-216ENST00000477983 SPOCK3Q9BQ16 436 aa9.37□□□□□ -0.91
LMBR1-216ENST00000477983 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
LMBR1-216ENST00000477983 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
LMBR1-216ENST00000477983 SFI1A8K8P3 1242 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 GNB5O14775 395 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 C21orf2O43822 256 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 PROCP04070 461 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 TSEN2Q8NCE0 465 aaKnown RBP9.36□□□□□ -0.91
LMBR1-216ENST00000477983 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 RHPN1Q8TCX5 695 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 MDFIQ99750 246 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 SUV39H2Q9H5I1 410 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 CHMP3Q9Y3E7 222 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
LMBR1-216ENST00000477983 RASA1P20936 1047 aa9.35□□□□□ -0.91
LMBR1-216ENST00000477983 PCBP4P57723 403 aaKnown RBP9.35□□□□□ -0.91
LMBR1-216ENST00000477983 ZNF594Q96JF6 807 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-216ENST00000477983 ANKIB1Q9P2G1 1089 aa9.35□□□□□ -0.91
LMBR1-216ENST00000477983 RBM19Q9Y4C8 960 aaKnown RBP9.35□□□□□ -0.91
LMBR1-216ENST00000477983 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
LMBR1-216ENST00000477983 SEC13P55735 322 aa9.34□□□□□ -0.91
LMBR1-216ENST00000477983 SFSWAPQ12872 951 aaKnown RBP9.34□□□□□ -0.91
LMBR1-216ENST00000477983 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
LMBR1-216ENST00000477983 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
LMBR1-216ENST00000477983 PHACTR1Q9C0D0 580 aa9.34□□□□□ -0.91
LMBR1-216ENST00000477983 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-216ENST00000477983 ELOA3DA6NLF2 546 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-216ENST00000477983 SIN3BO75182 1162 aa9.33□□□□□ -0.92
LMBR1-216ENST00000477983 KCNQ4P56696 695 aa9.33□□□□□ -0.92
LMBR1-216ENST00000477983 ELOA3BQ3SY89 546 aa9.33□□□□□ -0.92
LMBR1-216ENST00000477983 SYT9Q86SS6 491 aa9.33□□□□□ -0.92
LMBR1-216ENST00000477983 ELOA3Q8NG57 546 aa9.33□□□□□ -0.92
LMBR1-216ENST00000477983 CALR3Q96L12 384 aaKnown RBP9.33□□□□□ -0.92
LMBR1-216ENST00000477983 ADARB2-AS1A8MUL3 147 aa9.32□□□□□ -0.92
LMBR1-216ENST00000477983 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
LMBR1-216ENST00000477983 PTK7Q13308 1070 aa9.32□□□□□ -0.92
LMBR1-216ENST00000477983 GRIN2CQ14957 1233 aa9.32□□□□□ -0.92
LMBR1-216ENST00000477983 C2orf49Q9BVC5 232 aaPredicted RBP9.32□□□□□ -0.92
LMBR1-216ENST00000477983 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
LMBR1-216ENST00000477983 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
LMBR1-216ENST00000477983 ALDH16A1Q8IZ83 802 aa9.31□□□□□ -0.92
LMBR1-216ENST00000477983 SUSD3Q96L08 255 aa9.31□□□□□ -0.92
LMBR1-216ENST00000477983 SLC30A3Q99726 388 aa9.31□□□□□ -0.92
LMBR1-216ENST00000477983 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
LMBR1-216ENST00000477983 SCG3Q8WXD2 468 aaKnown RBP9.3□□□□□ -0.92
LMBR1-216ENST00000477983 TNFRSF25Q93038 417 aa9.3□□□□□ -0.92
LMBR1-216ENST00000477983 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
LMBR1-216ENST00000477983 ALAS2P22557 587 aa9.29□□□□□ -0.92
LMBR1-216ENST00000477983 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
LMBR1-216ENST00000477983 XP32Q5T750 250 aa9.29□□□□□ -0.92
LMBR1-216ENST00000477983 HSH2DQ96JZ2 352 aa9.29□□□□□ -0.92
LMBR1-216ENST00000477983 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
LMBR1-216ENST00000477983 BRD7Q9NPI1 651 aa9.29□□□□□ -0.92
LMBR1-216ENST00000477983 TYRO3Q06418 890 aa9.28□□□□□ -0.92
LMBR1-216ENST00000477983 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
LMBR1-216ENST00000477983 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
LMBR1-216ENST00000477983 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
LMBR1-216ENST00000477983 KCNH4Q9UQ05 1017 aa9.28□□□□□ -0.92
LMBR1-216ENST00000477983 DPYDQ12882 1025 aa9.27□□□□□ -0.93
LMBR1-216ENST00000477983 HIF1AQ16665 826 aa9.27□□□□□ -0.93
LMBR1-216ENST00000477983 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
LMBR1-216ENST00000477983 ADAM23O75077 832 aa9.26□□□□□ -0.93
LMBR1-216ENST00000477983 IGFBP4P22692 258 aa9.26□□□□□ -0.93
LMBR1-216ENST00000477983 NEUROD1Q13562 356 aa9.26□□□□□ -0.93
LMBR1-216ENST00000477983 C1QTNF9BB2RNN3 333 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L21D6R901 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
LMBR1-216ENST00000477983 BAG6P46379 1132 aa9.25□□□□□ -0.93
LMBR1-216ENST00000477983 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms