RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 GOLGB1Q14789 3259 aaKnown RBP11□□□□□ -0.65
ERCC8-205ENST00000477893 MYH14Q7Z406 1995 aaKnown RBP11□□□□□ -0.65
ERCC8-205ENST00000477893 BTBD11A6QL63 1104 aa11□□□□□ -0.65
ERCC8-205ENST00000477893 KCNQ3O43525 872 aa11□□□□□ -0.65
ERCC8-205ENST00000477893 CYP19A1P11511 503 aaPredicted RBP11□□□□□ -0.65
ERCC8-205ENST00000477893 GYS1P13807 737 aa11□□□□□ -0.65
ERCC8-205ENST00000477893 CANXP27824 592 aaKnown RBP11□□□□□ -0.65
ERCC8-205ENST00000477893 RALBP1Q15311 655 aa11□□□□□ -0.65
ERCC8-205ENST00000477893 ZNF496Q96IT1 587 aaPredicted RBP11□□□□□ -0.65
ERCC8-205ENST00000477893 ZBTB1Q9Y2K1 713 aa11□□□□□ -0.65
ERCC8-205ENST00000477893 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
ERCC8-205ENST00000477893 UBR2Q8IWV8 1755 aa10.99□□□□□ -0.65
ERCC8-205ENST00000477893 YBX3P16989 372 aaKnown RBP eCLIP10.99□□□□□ -0.65
ERCC8-205ENST00000477893 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
ERCC8-205ENST00000477893 ZNF790Q6PG37 636 aa10.99□□□□□ -0.65
ERCC8-205ENST00000477893 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
ERCC8-205ENST00000477893 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
ERCC8-205ENST00000477893 ZPR1O75312 459 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 MKRN3Q13064 507 aaKnown RBP10.98□□□□□ -0.65
ERCC8-205ENST00000477893 FKBP8Q14318 412 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 FMNL2Q96PY5 1086 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
ERCC8-205ENST00000477893 MIS18AQ9NYP9 233 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 CD2APQ9Y5K6 639 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
ERCC8-205ENST00000477893 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
ERCC8-205ENST00000477893 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
ERCC8-205ENST00000477893 COL15A1P39059 1388 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 HEG1Q9ULI3 1381 aa10.98□□□□□ -0.65
ERCC8-205ENST00000477893 PRAMEF22A3QJZ6 481 aa10.97□□□□□ -0.65
ERCC8-205ENST00000477893 STARD3NLO95772 234 aa10.97□□□□□ -0.65
ERCC8-205ENST00000477893 PIP4K2AP48426 406 aaPredicted RBP10.97□□□□□ -0.65
ERCC8-205ENST00000477893 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
ERCC8-205ENST00000477893 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
ERCC8-205ENST00000477893 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
ERCC8-205ENST00000477893 ZEB1P37275 1124 aaPredicted RBP10.96□□□□□ -0.65
ERCC8-205ENST00000477893 DDR1Q08345 913 aa10.96□□□□□ -0.65
ERCC8-205ENST00000477893 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
ERCC8-205ENST00000477893 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
ERCC8-205ENST00000477893 A1BGP04217 495 aa10.95□□□□□ -0.66
ERCC8-205ENST00000477893 WDR43Q15061 677 aaKnown RBP eCLIP10.95□□□□□ -0.66
ERCC8-205ENST00000477893 NFE2L2Q16236 605 aa10.95□□□□□ -0.66
ERCC8-205ENST00000477893 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
ERCC8-205ENST00000477893 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
ERCC8-205ENST00000477893 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
ERCC8-205ENST00000477893 PXDNLA1KZ92 1463 aa10.94□□□□□ -0.66
ERCC8-205ENST00000477893 A0A0G2JLW4 131 aa10.94□□□□□ -0.66
ERCC8-205ENST00000477893 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
ERCC8-205ENST00000477893 NPM2Q86SE8 214 aaKnown RBP10.94□□□□□ -0.66
ERCC8-205ENST00000477893 TBC1D2BQ9UPU7 963 aa10.94□□□□□ -0.66
ERCC8-205ENST00000477893 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
ERCC8-205ENST00000477893 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
ERCC8-205ENST00000477893 NARFQ9UHQ1 456 aa10.93□□□□□ -0.66
ERCC8-205ENST00000477893 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
ERCC8-205ENST00000477893 N4BP2Q86UW6 1770 aaPredicted RBP10.93□□□□□ -0.66
ERCC8-205ENST00000477893 POLRMTO00411 1230 aaKnown RBP10.92□□□□□ -0.66
ERCC8-205ENST00000477893 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
ERCC8-205ENST00000477893 GRIN3BO60391 1043 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
ERCC8-205ENST00000477893 DPEP1P16444 411 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 RIPK4P57078 832 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 NFIXQ14938 502 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
ERCC8-205ENST00000477893 TEX13AQ9BXU3 409 aaPredicted RBP10.92□□□□□ -0.66
ERCC8-205ENST00000477893 BCL2L12Q9HB09 334 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 BCS1LQ9Y276 419 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 USP16Q9Y5T5 823 aa10.92□□□□□ -0.66
ERCC8-205ENST00000477893 A0A087WZG4 1122 aa10.91□□□□□ -0.66
ERCC8-205ENST00000477893 CHRNA5P30532 468 aa10.91□□□□□ -0.66
ERCC8-205ENST00000477893 EIF5P55010 431 aaKnown RBP10.91□□□□□ -0.66
ERCC8-205ENST00000477893 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
ERCC8-205ENST00000477893 ZNF784Q8NCA9 323 aaPredicted RBP10.91□□□□□ -0.66
ERCC8-205ENST00000477893 KIAA1551Q9HCM1 1747 aa10.9□□□□□ -0.66
ERCC8-205ENST00000477893 SCN7AQ01118 1682 aa10.9□□□□□ -0.66
ERCC8-205ENST00000477893 SENP3-EIF4A1A0A087X0R7 540 aa10.9□□□□□ -0.66
ERCC8-205ENST00000477893 IL6STP40189 918 aaPredicted RBP10.9□□□□□ -0.66
ERCC8-205ENST00000477893 TBC1D9BQ66K14 1250 aa10.9□□□□□ -0.66
ERCC8-205ENST00000477893 NGEFQ8N5V2 710 aa10.9□□□□□ -0.66
ERCC8-205ENST00000477893 TSPYL4Q9UJ04 414 aa10.9□□□□□ -0.66
ERCC8-205ENST00000477893 LAS1LQ9Y4W2 734 aaKnown RBP10.9□□□□□ -0.66
ERCC8-205ENST00000477893 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.67
ERCC8-205ENST00000477893 NPHP1O15259 732 aa10.89□□□□□ -0.67
ERCC8-205ENST00000477893 SERPINB2P05120 415 aa10.89□□□□□ -0.67
ERCC8-205ENST00000477893 TM4SF1P30408 202 aa10.89□□□□□ -0.67
ERCC8-205ENST00000477893 TMPOP42166 694 aaKnown RBP10.89□□□□□ -0.67
ERCC8-205ENST00000477893 TGFB2P61812 414 aa10.89□□□□□ -0.67
ERCC8-205ENST00000477893 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
ERCC8-205ENST00000477893 PNISRQ8TF01 805 aaKnown RBP10.89□□□□□ -0.67
ERCC8-205ENST00000477893 ZNF526Q8TF50 670 aaPredicted RBP10.89□□□□□ -0.67
ERCC8-205ENST00000477893 ADAMTS8Q9UP79 889 aa10.89□□□□□ -0.67
ERCC8-205ENST00000477893 KDM3BQ7LBC6 1761 aa10.89□□□□□ -0.67
ERCC8-205ENST00000477893 KIF13BQ9NQT8 1826 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 CHD4Q14839 1912 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
ERCC8-205ENST00000477893 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 CAMTA2O94983 1202 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 NBPF10Q6P3W6 841 aaKnown RBP10.88□□□□□ -0.67
ERCC8-205ENST00000477893 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms