RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 SRGNP10124 158 aa24.85■■□□□ 1.57
PRKCD-204ENST00000477794 U2AF1Q01081 240 aaKnown RBP eCLIP24.85■■□□□ 1.57
PRKCD-204ENST00000477794 CCDC24Q8N4L8 307 aa24.85■■□□□ 1.57
PRKCD-204ENST00000477794 RSPH6AQ9H0K4 717 aa24.85■■□□□ 1.57
PRKCD-204ENST00000477794 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
PRKCD-204ENST00000477794 SIPA1L3O60292 1781 aaPredicted RBP24.83■■□□□ 1.57
PRKCD-204ENST00000477794 IQCA1LA6NCM1 817 aa24.83■■□□□ 1.57
PRKCD-204ENST00000477794 NEFMP07197 916 aa24.82■■□□□ 1.56
PRKCD-204ENST00000477794 TPTE2Q6XPS3 522 aa24.82■■□□□ 1.56
PRKCD-204ENST00000477794 ANKRD31Q8N7Z5 1873 aa24.81■■□□□ 1.56
PRKCD-204ENST00000477794 HTATSF1O43719 755 aaKnown RBP24.81■■□□□ 1.56
PRKCD-204ENST00000477794 CCDC93Q567U6 631 aa24.81■■□□□ 1.56
PRKCD-204ENST00000477794 CHADLQ6NUI6 762 aa24.81■■□□□ 1.56
PRKCD-204ENST00000477794 USP16Q9Y5T5 823 aa24.81■■□□□ 1.56
PRKCD-204ENST00000477794 PCNTO95613 3336 aa24.81■■□□□ 1.56
PRKCD-204ENST00000477794 KCNQ3O43525 872 aa24.8■■□□□ 1.56
PRKCD-204ENST00000477794 NPR1P16066 1061 aa24.8■■□□□ 1.56
PRKCD-204ENST00000477794 COL13A1Q5TAT6 717 aaPredicted RBP24.8■■□□□ 1.56
PRKCD-204ENST00000477794 TNS4Q8IZW8 715 aa24.8■■□□□ 1.56
PRKCD-204ENST00000477794 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
PRKCD-204ENST00000477794 POTECB2RU33 542 aa24.78■■□□□ 1.56
PRKCD-204ENST00000477794 COL11A2P13942 1736 aaPredicted RBP24.78■■□□□ 1.56
PRKCD-204ENST00000477794 FER1L6Q2WGJ9 1857 aa24.77■■□□□ 1.56
PRKCD-204ENST00000477794 GTF2E1P29083 439 aaPredicted RBP24.77■■□□□ 1.56
PRKCD-204ENST00000477794 MCM10Q7L590 875 aa24.77■■□□□ 1.56
PRKCD-204ENST00000477794 CREBZFQ9NS37 354 aa24.77■■□□□ 1.56
PRKCD-204ENST00000477794 NIP7Q9Y221 180 aaKnown RBP eCLIP24.77■■□□□ 1.56
PRKCD-204ENST00000477794 DDNO94850 711 aaPredicted RBP24.76■■□□□ 1.55
PRKCD-204ENST00000477794 RTKN2Q8IZC4 609 aa24.76■■□□□ 1.55
PRKCD-204ENST00000477794 BCORQ6W2J9 1755 aa24.75■■□□□ 1.55
PRKCD-204ENST00000477794 DICER1Q9UPY3 1922 aaKnown RBP24.75■■□□□ 1.55
PRKCD-204ENST00000477794 HSPA1AP0DMV8 641 aaKnown RBP24.75■■□□□ 1.55
PRKCD-204ENST00000477794 HSPA1BP0DMV9 641 aaKnown RBP24.75■■□□□ 1.55
PRKCD-204ENST00000477794 PIP4K2AP48426 406 aaPredicted RBP24.75■■□□□ 1.55
PRKCD-204ENST00000477794 PPP2R1AP30153 589 aa24.74■■□□□ 1.55
PRKCD-204ENST00000477794 ALDH1B1P30837 517 aa24.74■■□□□ 1.55
PRKCD-204ENST00000477794 TAF7Q15545 349 aaPredicted RBP24.74■■□□□ 1.55
PRKCD-204ENST00000477794 PNISRQ8TF01 805 aaKnown RBP24.74■■□□□ 1.55
PRKCD-204ENST00000477794 FKBP4Q02790 459 aaKnown RBP eCLIP24.73■■□□□ 1.55
PRKCD-204ENST00000477794 LDHDQ86WU2 507 aa24.73■■□□□ 1.55
PRKCD-204ENST00000477794 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
PRKCD-204ENST00000477794 KLRG2A4D1S0 409 aaPredicted RBP24.72■■□□□ 1.55
PRKCD-204ENST00000477794 NYXQ9GZU5 481 aa24.72■■□□□ 1.55
PRKCD-204ENST00000477794 SLX4Q8IY92 1834 aa24.72■■□□□ 1.55
PRKCD-204ENST00000477794 PRAMEF22A3QJZ6 481 aa24.71■■□□□ 1.55
PRKCD-204ENST00000477794 C7orf43Q8WVR3 580 aa24.71■■□□□ 1.55
PRKCD-204ENST00000477794 ARFGEF2Q9Y6D5 1785 aa24.7■■□□□ 1.55
PRKCD-204ENST00000477794 NBPF26B4DH59 902 aa24.69■■□□□ 1.54
PRKCD-204ENST00000477794 NBPF10Q6P3W6 841 aaKnown RBP24.69■■□□□ 1.54
PRKCD-204ENST00000477794 NBPF15Q8N660 670 aa24.69■■□□□ 1.54
PRKCD-204ENST00000477794 FAM177BA6PVY3 158 aa24.68■■□□□ 1.54
PRKCD-204ENST00000477794 CAPN15O75808 1086 aa24.68■■□□□ 1.54
PRKCD-204ENST00000477794 DCTN1Q14203 1278 aa24.68■■□□□ 1.54
PRKCD-204ENST00000477794 TAF1DQ9H5J8 278 aaPredicted RBP24.68■■□□□ 1.54
PRKCD-204ENST00000477794 ZNF277Q9NRM2 450 aaPredicted RBP24.68■■□□□ 1.54
PRKCD-204ENST00000477794 HACL1Q9UJ83 578 aa24.68■■□□□ 1.54
PRKCD-204ENST00000477794 CC2D2BQ6DHV5 1058 aa24.67■■□□□ 1.54
PRKCD-204ENST00000477794 KIF6Q6ZMV9 814 aa24.67■■□□□ 1.54
PRKCD-204ENST00000477794 PNMA8AQ86V59 439 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-204ENST00000477794 MKRN1Q9UHC7 482 aaKnown RBP24.67■■□□□ 1.54
PRKCD-204ENST00000477794 ERVV-1B6SEH8 477 aa24.66■■□□□ 1.54
PRKCD-204ENST00000477794 GRIPAP1Q4V328 841 aa24.66■■□□□ 1.54
PRKCD-204ENST00000477794 JDP2Q8WYK2 163 aa24.66■■□□□ 1.54
PRKCD-204ENST00000477794 PNNQ9H307 717 aaKnown RBP24.66■■□□□ 1.54
PRKCD-204ENST00000477794 EAPPQ56P03 285 aaPredicted RBP24.65■■□□□ 1.54
PRKCD-204ENST00000477794 CACNA1SQ13698 1873 aa24.64■■□□□ 1.54
PRKCD-204ENST00000477794 SCN4AP35499 1836 aa24.64■■□□□ 1.54
PRKCD-204ENST00000477794 POTEIP0CG38 1075 aa24.64■■□□□ 1.54
PRKCD-204ENST00000477794 POTEJP0CG39 1038 aa24.64■■□□□ 1.54
PRKCD-204ENST00000477794 IARSP41252 1262 aaKnown RBP24.64■■□□□ 1.54
PRKCD-204ENST00000477794 CLEC11AQ9Y240 323 aa24.64■■□□□ 1.54
PRKCD-204ENST00000477794 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
PRKCD-204ENST00000477794 AIDAQ96BJ3 306 aa24.63■■□□□ 1.53
PRKCD-204ENST00000477794 PSMD1Q99460 953 aa24.63■■□□□ 1.53
PRKCD-204ENST00000477794 TMEM88BA6NKF7 163 aa24.62■■□□□ 1.53
PRKCD-204ENST00000477794 HLFQ16534 295 aa24.62■■□□□ 1.53
PRKCD-204ENST00000477794 GPC2Q8N158 579 aa24.62■■□□□ 1.53
PRKCD-204ENST00000477794 SYNE4Q8N205 404 aa24.62■■□□□ 1.53
PRKCD-204ENST00000477794 TMX4Q9H1E5 349 aaPredicted RBP24.62■■□□□ 1.53
PRKCD-204ENST00000477794 CNTNAP1P78357 1384 aa24.62■■□□□ 1.53
PRKCD-204ENST00000477794 MAP3K15Q6ZN16 1313 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 PASKQ96RG2 1323 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 EPHX2P34913 555 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 CRY2Q49AN0 593 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 NGEFQ8N5V2 710 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 MIS18AQ9NYP9 233 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 MAPK8IP3Q9UPT6 1336 aa24.61■■□□□ 1.53
PRKCD-204ENST00000477794 IBTKQ9P2D0 1353 aaPredicted RBP24.6■■□□□ 1.53
PRKCD-204ENST00000477794 EIF6P56537 245 aaKnown RBP24.6■■□□□ 1.53
PRKCD-204ENST00000477794 RRP7AQ9Y3A4 280 aaKnown RBP24.6■■□□□ 1.53
PRKCD-204ENST00000477794 FZD9O00144 591 aa24.59■■□□□ 1.53
PRKCD-204ENST00000477794 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
PRKCD-204ENST00000477794 ERBB4Q15303 1308 aa24.58■■□□□ 1.52
PRKCD-204ENST00000477794 LAMB4A4D0S4 1761 aa24.57■■□□□ 1.52
PRKCD-204ENST00000477794 EIF4A1P60842 406 aaKnown RBP24.57■■□□□ 1.52
PRKCD-204ENST00000477794 NFE2L2Q16236 605 aa24.57■■□□□ 1.52
PRKCD-204ENST00000477794 OLFM4Q6UX06 510 aa24.57■■□□□ 1.52
PRKCD-204ENST00000477794 NUTM1Q86Y26 1132 aa24.57■■□□□ 1.52
PRKCD-204ENST00000477794 RBM17Q96I25 401 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms