RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SKIV2LQ15477 1246 aaKnown RBP7.62□□□□□ -1.19
CKS1B-207ENST00000477676 TAS1R3Q7RTX0 852 aa7.62□□□□□ -1.19
CKS1B-207ENST00000477676 PROCA1Q8NCQ7 364 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-207ENST00000477676 SEMA6BQ9H3T3 888 aa7.62□□□□□ -1.19
CKS1B-207ENST00000477676 AGLP35573 1532 aa7.62□□□□□ -1.19
CKS1B-207ENST00000477676 UHRF1BP1Q6BDS2 1440 aa7.61□□□□□ -1.19
CKS1B-207ENST00000477676 SUPT6HQ7KZ85 1726 aaKnown RBP7.61□□□□□ -1.19
CKS1B-207ENST00000477676 AMPD1P23109 780 aa7.61□□□□□ -1.19
CKS1B-207ENST00000477676 GOLGA6L1Q8N7Z2 621 aa7.61□□□□□ -1.19
CKS1B-207ENST00000477676 GPAMQ9HCL2 828 aa7.61□□□□□ -1.19
CKS1B-207ENST00000477676 HMX1Q9NP08 348 aaPredicted RBP7.61□□□□□ -1.19
CKS1B-207ENST00000477676 PHF24Q9UPV7 400 aa7.61□□□□□ -1.19
CKS1B-207ENST00000477676 SAMD9LQ8IVG5 1584 aa7.61□□□□□ -1.19
CKS1B-207ENST00000477676 MROH2AA6NES4 1674 aa7.6□□□□□ -1.19
CKS1B-207ENST00000477676 UBTFP17480 764 aaKnown RBP7.6□□□□□ -1.19
CKS1B-207ENST00000477676 ERVK-9P63128 1117 aa7.6□□□□□ -1.19
CKS1B-207ENST00000477676 CC2D2BQ6DHV5 1058 aa7.6□□□□□ -1.19
CKS1B-207ENST00000477676 BCANQ96GW7 911 aa7.6□□□□□ -1.19
CKS1B-207ENST00000477676 PTPRTO14522 1441 aa7.6□□□□□ -1.19
CKS1B-207ENST00000477676 C2CD2LO14523 706 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 GNB5O14775 395 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 CHRNA4P43681 627 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 DOC2BQ14184 412 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 ZMYM1Q5SVZ6 1142 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 BTBD6Q96KE9 485 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 CLTCQ00610 1675 aaKnown RBP7.59□□□□□ -1.19
CKS1B-207ENST00000477676 NCOA1Q15788 1441 aa7.59□□□□□ -1.19
CKS1B-207ENST00000477676 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
CKS1B-207ENST00000477676 SH3D19Q5HYK7 790 aa7.58□□□□□ -1.2
CKS1B-207ENST00000477676 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.58□□□□□ -1.2
CKS1B-207ENST00000477676 CAMSAP1Q5T5Y3 1602 aa7.58□□□□□ -1.2
CKS1B-207ENST00000477676 CLIP1P30622 1438 aa7.58□□□□□ -1.2
CKS1B-207ENST00000477676 CASKIN1Q8WXD9 1431 aa7.58□□□□□ -1.2
CKS1B-207ENST00000477676 SPATA31D1Q6ZQQ2 1576 aa7.58□□□□□ -1.2
CKS1B-207ENST00000477676 DISP3Q9P2K9 1392 aa7.58□□□□□ -1.2
CKS1B-207ENST00000477676 SYCP2Q9BX26 1530 aa7.57□□□□□ -1.2
CKS1B-207ENST00000477676 ZNF142P52746 1687 aaPredicted RBP7.57□□□□□ -1.2
CKS1B-207ENST00000477676 PIK3R2O00459 728 aa7.57□□□□□ -1.2
CKS1B-207ENST00000477676 CYP2U1Q7Z449 544 aa7.57□□□□□ -1.2
CKS1B-207ENST00000477676 GGA1Q9UJY5 639 aa7.57□□□□□ -1.2
CKS1B-207ENST00000477676 CDK11AQ9UQ88 783 aaPredicted RBP7.57□□□□□ -1.2
CKS1B-207ENST00000477676 PCDHB9Q9Y5E1 797 aa7.57□□□□□ -1.2
CKS1B-207ENST00000477676 PLXNC1O60486 1568 aa7.57□□□□□ -1.2
CKS1B-207ENST00000477676 INO80Q9ULG1 1556 aaPredicted RBP7.57□□□□□ -1.2
CKS1B-207ENST00000477676 MYO3AQ8NEV4 1616 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 BMP4P12644 408 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 PHKA2P46019 1235 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 SCTRP47872 440 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 SLCO4C1Q6ZQN7 724 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 CCDC125Q86Z20 511 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 KDM4CQ9H3R0 1056 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 ARHGEF10LQ9HCE6 1279 aa7.56□□□□□ -1.2
CKS1B-207ENST00000477676 GPATCH8Q9UKJ3 1502 aaKnown RBP7.56□□□□□ -1.2
CKS1B-207ENST00000477676 CCDC18Q5T9S5 1454 aa7.55□□□□□ -1.2
CKS1B-207ENST00000477676 SOCS7O14512 581 aa7.55□□□□□ -1.2
CKS1B-207ENST00000477676 USP17L8P0C7I0 530 aa7.55□□□□□ -1.2
CKS1B-207ENST00000477676 CTBSQ01459 385 aa7.55□□□□□ -1.2
CKS1B-207ENST00000477676 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
CKS1B-207ENST00000477676 CNTLNQ9NXG0 1405 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 ATP7AQ04656 1500 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 TRAK2O60296 914 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 EPXP11678 715 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 HNRNPMP52272 730 aaKnown RBP eCLIP7.54□□□□□ -1.2
CKS1B-207ENST00000477676 CENPCQ03188 943 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 KRTAP4-12Q9BQ66 201 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 OSBPL3Q9H4L5 887 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
CKS1B-207ENST00000477676 ATXN7L1Q9ULK2 861 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-207ENST00000477676 ZMYM3Q14202 1370 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 IQSEC2Q5JU85 1478 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 FYCO1Q9BQS8 1478 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 ADGBQ8N7X0 1667 aa7.54□□□□□ -1.2
CKS1B-207ENST00000477676 NPATQ14207 1427 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 DGKGP49619 791 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 LBRQ14739 615 aaKnown RBP7.53□□□□□ -1.2
CKS1B-207ENST00000477676 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 RUBCNLQ9H714 662 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
CKS1B-207ENST00000477676 TCOF1Q13428 1488 aaKnown RBP7.53□□□□□ -1.2
CKS1B-207ENST00000477676 CEP170BQ9Y4F5 1589 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-207ENST00000477676 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.2
CKS1B-207ENST00000477676 PTPRKQ15262 1439 aa7.52□□□□□ -1.2
CKS1B-207ENST00000477676 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 FGFR3P22607 806 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 ZNF592Q92610 1267 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 TRIM34Q9BYJ4 488 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
CKS1B-207ENST00000477676 POLR1AO95602 1720 aaPredicted RBP7.52□□□□□ -1.21
CKS1B-207ENST00000477676 TIAM1Q13009 1591 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 NEURL4Q96JN8 1562 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 A2MP01023 1474 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 CFAP65Q6ZU64 1925 aaKnown RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 BNIP3LO60238 219 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 IL2RAP01589 272 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 GATA4P43694 442 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms