RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PRR5LQ6MZQ0 368 aa23.07■■□□□ 1.28
PTPN7-209ENST00000477554 BCS1LQ9Y276 419 aa23.07■■□□□ 1.28
PTPN7-209ENST00000477554 NUP98P52948 1817 aa23.07■■□□□ 1.28
PTPN7-209ENST00000477554 CFAP44Q96MT7 982 aa23.06■■□□□ 1.28
PTPN7-209ENST00000477554 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
PTPN7-209ENST00000477554 ZBTB3Q9H5J0 574 aa23.05■■□□□ 1.28
PTPN7-209ENST00000477554 SALL2Q9Y467 1007 aaPredicted RBP23.05■■□□□ 1.28
PTPN7-209ENST00000477554 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
PTPN7-209ENST00000477554 DLEC1Q9Y238 1755 aa23.03■■□□□ 1.28
PTPN7-209ENST00000477554 CCER2I3L3R5 266 aa23.03■■□□□ 1.28
PTPN7-209ENST00000477554 FAM9BQ8IZU0 186 aa23.03■■□□□ 1.28
PTPN7-209ENST00000477554 SETDB2Q96T68 719 aa23.03■■□□□ 1.28
PTPN7-209ENST00000477554 GRIN3BO60391 1043 aa23.02■■□□□ 1.28
PTPN7-209ENST00000477554 MAP3K15Q6ZN16 1313 aa23.01■■□□□ 1.27
PTPN7-209ENST00000477554 ELL2O00472 640 aaPredicted RBP23.01■■□□□ 1.27
PTPN7-209ENST00000477554 TSR2Q969E8 191 aaKnown RBP23.01■■□□□ 1.27
PTPN7-209ENST00000477554 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
PTPN7-209ENST00000477554 NIP7Q9Y221 180 aaKnown RBP eCLIP23.01■■□□□ 1.27
PTPN7-209ENST00000477554 ARFGEF1Q9Y6D6 1849 aa23.01■■□□□ 1.27
PTPN7-209ENST00000477554 UBN2Q6ZU65 1347 aa23.01■■□□□ 1.27
PTPN7-209ENST00000477554 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
PTPN7-209ENST00000477554 CLEC4GQ6UXB4 293 aa23■■□□□ 1.27
PTPN7-209ENST00000477554 WWC1Q8IX03 1113 aa23■■□□□ 1.27
PTPN7-209ENST00000477554 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
PTPN7-209ENST00000477554 ZNF784Q8NCA9 323 aaPredicted RBP23■■□□□ 1.27
PTPN7-209ENST00000477554 IFT57Q9NWB7 429 aa23■■□□□ 1.27
PTPN7-209ENST00000477554 C2CD5Q86YS7 1000 aa22.99■■□□□ 1.27
PTPN7-209ENST00000477554 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
PTPN7-209ENST00000477554 TNRC6CQ9HCJ0 1690 aaKnown RBP22.99■■□□□ 1.27
PTPN7-209ENST00000477554 GPTP24298 496 aa22.99■■□□□ 1.27
PTPN7-209ENST00000477554 TSPYL6Q8N831 410 aa22.99■■□□□ 1.27
PTPN7-209ENST00000477554 CNBD1Q8NA66 436 aa22.99■■□□□ 1.27
PTPN7-209ENST00000477554 PIM2Q9P1W9 311 aa22.99■■□□□ 1.27
PTPN7-209ENST00000477554 ERBB4Q15303 1308 aa22.98■■□□□ 1.27
PTPN7-209ENST00000477554 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
PTPN7-209ENST00000477554 COPS6Q7L5N1 327 aa22.98■■□□□ 1.27
PTPN7-209ENST00000477554 XAGE3Q8WTP9 111 aa22.98■■□□□ 1.27
PTPN7-209ENST00000477554 CACNA1SQ13698 1873 aa22.97■■□□□ 1.27
PTPN7-209ENST00000477554 HDGFL1Q5TGJ6 251 aa22.97■■□□□ 1.27
PTPN7-209ENST00000477554 NBPF5PQ86XG9 351 aaPredicted RBP22.97■■□□□ 1.27
PTPN7-209ENST00000477554 ZNF652Q9Y2D9 606 aa22.97■■□□□ 1.27
PTPN7-209ENST00000477554 ABCC12Q96J65 1359 aa22.97■■□□□ 1.27
PTPN7-209ENST00000477554 ERVV-1B6SEH8 477 aa22.96■■□□□ 1.27
PTPN7-209ENST00000477554 GNAI1P63096 354 aa22.96■■□□□ 1.27
PTPN7-209ENST00000477554 DALRD3Q5D0E6 543 aaKnown RBP22.96■■□□□ 1.27
PTPN7-209ENST00000477554 KIF6Q6ZMV9 814 aa22.96■■□□□ 1.27
PTPN7-209ENST00000477554 NUTM1Q86Y26 1132 aa22.96■■□□□ 1.27
PTPN7-209ENST00000477554 SPINK5Q9NQ38 1064 aaPredicted RBP22.96■■□□□ 1.27
PTPN7-209ENST00000477554 ARHGAP27Q6ZUM4 889 aa22.95■■□□□ 1.26
PTPN7-209ENST00000477554 BRIP1Q9BX63 1249 aa22.95■■□□□ 1.26
PTPN7-209ENST00000477554 ATP10DQ9P241 1426 aa22.94■■□□□ 1.26
PTPN7-209ENST00000477554 CCDC27Q2M243 656 aa22.94■■□□□ 1.26
PTPN7-209ENST00000477554 SUSD4Q5VX71 490 aa22.94■■□□□ 1.26
PTPN7-209ENST00000477554 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
PTPN7-209ENST00000477554 ZNF34Q8IZ26 560 aa22.93■■□□□ 1.26
PTPN7-209ENST00000477554 SLX4Q8IY92 1834 aa22.93■■□□□ 1.26
PTPN7-209ENST00000477554 ADCY9O60503 1353 aa22.92■■□□□ 1.26
PTPN7-209ENST00000477554 PRELPP51888 382 aa22.92■■□□□ 1.26
PTPN7-209ENST00000477554 GIGYF2Q6Y7W6 1299 aaKnown RBP22.92■■□□□ 1.26
PTPN7-209ENST00000477554 SLC51AQ86UW1 340 aa22.92■■□□□ 1.26
PTPN7-209ENST00000477554 ZNF622Q969S3 477 aaKnown RBP eCLIP22.92■■□□□ 1.261e-6■□□□□ 10.3
PTPN7-209ENST00000477554 ZNF219Q9P2Y4 722 aaPredicted RBP22.92■■□□□ 1.26
PTPN7-209ENST00000477554 H0YIN7 160 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 TCERG1O14776 1098 aaKnown RBP22.91■■□□□ 1.26
PTPN7-209ENST00000477554 NPHP1O15259 732 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 ERFEQ4G0M1 354 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 ANKRD36CQ5JPF3 1778 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 HOXB7P09629 217 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 ST5P78524 1137 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 RASSF7Q02833 373 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 C3orf67Q6ZVT6 689 aa22.91■■□□□ 1.26
PTPN7-209ENST00000477554 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
PTPN7-209ENST00000477554 RGL2O15211 777 aa22.9■■□□□ 1.26
PTPN7-209ENST00000477554 SRGNP10124 158 aa22.9■■□□□ 1.26
PTPN7-209ENST00000477554 PDE6BP35913 854 aa22.9■■□□□ 1.26
PTPN7-209ENST00000477554 CALD1Q05682 793 aaKnown RBP22.9■■□□□ 1.26
PTPN7-209ENST00000477554 SYNE4Q8N205 404 aa22.9■■□□□ 1.26
PTPN7-209ENST00000477554 SBF1O95248 1867 aa22.89■■□□□ 1.25
PTPN7-209ENST00000477554 NTSR2O95665 410 aa22.89■■□□□ 1.25
PTPN7-209ENST00000477554 TTLL6Q8N841 843 aa22.89■■□□□ 1.25
PTPN7-209ENST00000477554 OLFM4Q6UX06 510 aa22.88■■□□□ 1.25
PTPN7-209ENST00000477554 TPTE2Q6XPS3 522 aa22.88■■□□□ 1.25
PTPN7-209ENST00000477554 ZNF526Q8TF50 670 aaPredicted RBP22.88■■□□□ 1.25
PTPN7-209ENST00000477554 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
PTPN7-209ENST00000477554 ARFGEF2Q9Y6D5 1785 aa22.87■■□□□ 1.25
PTPN7-209ENST00000477554 DBF4Q9UBU7 674 aaPredicted RBP22.87■■□□□ 1.25
PTPN7-209ENST00000477554 KLRG2A4D1S0 409 aaPredicted RBP22.86■■□□□ 1.25
PTPN7-209ENST00000477554 C21orf2O43822 256 aa22.85■■□□□ 1.25
PTPN7-209ENST00000477554 NFKBIEO00221 500 aa22.84■■□□□ 1.25
PTPN7-209ENST00000477554 C9orf131Q5VYM1 1079 aa22.84■■□□□ 1.25
PTPN7-209ENST00000477554 CCDC88AQ3V6T2 1871 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 ATP5J2-PTCD1G3V325 749 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 TCIRG1Q13488 830 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 PRPF40BQ6NWY9 871 aaKnown RBP22.83■■□□□ 1.25
PTPN7-209ENST00000477554 NLRP10Q86W26 655 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 MASTLQ96GX5 879 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 IL16Q14005 1332 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 LAMB2P55268 1798 aa22.83■■□□□ 1.25
PTPN7-209ENST00000477554 GTF2E1P29083 439 aaPredicted RBP22.82■■□□□ 1.24
PTPN7-209ENST00000477554 NCBP3Q53F19 620 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms