RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
VHL-203ENST00000477538 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
VHL-203ENST00000477538 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.62■□□□□ 0.89
VHL-203ENST00000477538 ARHGAP45Q92619 1136 aa20.62■□□□□ 0.89
VHL-203ENST00000477538 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
VHL-203ENST00000477538 ADCY9O60503 1353 aa20.61■□□□□ 0.89
VHL-203ENST00000477538 RRP1P56182 461 aaKnown RBP20.61■□□□□ 0.89
VHL-203ENST00000477538 TBC1D2BQ9UPU7 963 aa20.61■□□□□ 0.89
VHL-203ENST00000477538 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 PI4KAP2A4QPH2 592 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 PLIN1O60240 522 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 ATF7IPQ6VMQ6 1270 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 PI4KAP1Q8N8J0 262 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 PLBD2Q8NHP8 589 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 ARHGEF1Q92888 912 aaKnown RBP20.6■□□□□ 0.89
VHL-203ENST00000477538 API5Q9BZZ5 524 aaKnown RBP20.6■□□□□ 0.89
VHL-203ENST00000477538 ZBTB3Q9H5J0 574 aa20.6■□□□□ 0.89
VHL-203ENST00000477538 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
VHL-203ENST00000477538 PXDNLA1KZ92 1463 aa20.59■□□□□ 0.89
VHL-203ENST00000477538 TRIM27P14373 513 aa20.59■□□□□ 0.89
VHL-203ENST00000477538 RFC4P35249 363 aa20.59■□□□□ 0.89
VHL-203ENST00000477538 FLAD1Q8NFF5 587 aa20.59■□□□□ 0.89
VHL-203ENST00000477538 PNPLA7Q6ZV29 1317 aa20.58■□□□□ 0.89
VHL-203ENST00000477538 NARFQ9UHQ1 456 aa20.58■□□□□ 0.89
VHL-203ENST00000477538 MAP3K2Q9Y2U5 619 aa20.58■□□□□ 0.89
VHL-203ENST00000477538 CASZ1Q86V15 1759 aa20.58■□□□□ 0.89
VHL-203ENST00000477538 ERVV-1B6SEH8 477 aa20.57■□□□□ 0.88
VHL-203ENST00000477538 F6X3S4 739 aa20.57■□□□□ 0.88
VHL-203ENST00000477538 ZPR1O75312 459 aa20.57■□□□□ 0.88
VHL-203ENST00000477538 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
VHL-203ENST00000477538 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
VHL-203ENST00000477538 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
VHL-203ENST00000477538 USP42Q9H9J4 1324 aaKnown RBP20.56■□□□□ 0.88
VHL-203ENST00000477538 COL24A1Q17RW2 1714 aa20.56■□□□□ 0.88
VHL-203ENST00000477538 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
VHL-203ENST00000477538 CLUAP1Q96AJ1 413 aa20.56■□□□□ 0.88
VHL-203ENST00000477538 SRP68Q9UHB9 627 aaKnown RBP20.56■□□□□ 0.88
VHL-203ENST00000477538 ABCC4O15439 1325 aa20.55■□□□□ 0.88
VHL-203ENST00000477538 MSH5O43196 834 aa20.55■□□□□ 0.88
VHL-203ENST00000477538 HLFQ16534 295 aa20.55■□□□□ 0.88
VHL-203ENST00000477538 USPL1Q5W0Q7 1092 aa20.55■□□□□ 0.88
VHL-203ENST00000477538 SLC4A10Q6U841 1118 aa20.55■□□□□ 0.88
VHL-203ENST00000477538 GIGYF2Q6Y7W6 1299 aaKnown RBP20.55■□□□□ 0.88
VHL-203ENST00000477538 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
VHL-203ENST00000477538 MS4A1P11836 297 aa20.54■□□□□ 0.88
VHL-203ENST00000477538 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
VHL-203ENST00000477538 METTL22Q9BUU2 404 aaPredicted RBP20.54■□□□□ 0.88
VHL-203ENST00000477538 ZNF652Q9Y2D9 606 aa20.54■□□□□ 0.88
VHL-203ENST00000477538 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
VHL-203ENST00000477538 RGL2O15211 777 aa20.53■□□□□ 0.88
VHL-203ENST00000477538 MYH3P11055 1940 aa20.53■□□□□ 0.88
VHL-203ENST00000477538 RLBP1P12271 317 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 NEXNQ0ZGT2 675 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 PDE3AQ14432 1141 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 HSP90AB3PQ58FF7 597 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 CLEC4GQ6UXB4 293 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 MYD88Q99836 296 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
VHL-203ENST00000477538 TCIRG1Q13488 830 aa20.51■□□□□ 0.87
VHL-203ENST00000477538 C20orf194Q5TEA3 1177 aa20.51■□□□□ 0.87
VHL-203ENST00000477538 PANK1Q8TE04 598 aa20.51■□□□□ 0.87
VHL-203ENST00000477538 SOCS7O14512 581 aa20.5■□□□□ 0.87
VHL-203ENST00000477538 GYS1P13807 737 aa20.5■□□□□ 0.87
VHL-203ENST00000477538 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
VHL-203ENST00000477538 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
VHL-203ENST00000477538 TMEM57Q8N5G2 664 aa20.5■□□□□ 0.87
VHL-203ENST00000477538 LAMB2P55268 1798 aa20.49■□□□□ 0.87
VHL-203ENST00000477538 ATP5J2-PTCD1G3V325 749 aa20.49■□□□□ 0.87
VHL-203ENST00000477538 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
VHL-203ENST00000477538 INTS3Q68E01 1043 aaKnown RBP20.49■□□□□ 0.87
VHL-203ENST00000477538 LINS1Q8NG48 757 aa20.49■□□□□ 0.87
VHL-203ENST00000477538 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
VHL-203ENST00000477538 GPTP24298 496 aa20.48■□□□□ 0.87
VHL-203ENST00000477538 CWF19L2Q2TBE0 894 aaKnown RBP20.48■□□□□ 0.87
VHL-203ENST00000477538 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
VHL-203ENST00000477538 ISCA1Q9BUE6 129 aa20.48■□□□□ 0.87
VHL-203ENST00000477538 ALDH1L1O75891 902 aa20.47■□□□□ 0.87
VHL-203ENST00000477538 IGKV5-2P06315 115 aa20.47■□□□□ 0.87
VHL-203ENST00000477538 FKBP8Q14318 412 aa20.47■□□□□ 0.87
VHL-203ENST00000477538 TBC1D9BQ66K14 1250 aa20.47■□□□□ 0.87
VHL-203ENST00000477538 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
VHL-203ENST00000477538 PDGFDQ9GZP0 370 aaPredicted RBP20.47■□□□□ 0.87
VHL-203ENST00000477538 NIP7Q9Y221 180 aaKnown RBP eCLIP20.47■□□□□ 0.87
VHL-203ENST00000477538 NEURL1BA8MQ27 555 aa20.46■□□□□ 0.87
VHL-203ENST00000477538 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
VHL-203ENST00000477538 DDX60Q8IY21 1712 aaKnown RBP20.46■□□□□ 0.87
VHL-203ENST00000477538 NRXN2Q9P2S2 1712 aa20.46■□□□□ 0.87
VHL-203ENST00000477538 PSDA5PKW4 1024 aaPredicted RBP20.45■□□□□ 0.86
VHL-203ENST00000477538 TRIM28Q13263 835 aaKnown RBP20.45■□□□□ 0.86
VHL-203ENST00000477538 MVPQ14764 893 aaKnown RBP20.45■□□□□ 0.86
VHL-203ENST00000477538 BICDL1Q6ZP65 573 aa20.45■□□□□ 0.86
VHL-203ENST00000477538 NLGN1Q8N2Q7 840 aa20.45■□□□□ 0.86
VHL-203ENST00000477538 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
VHL-203ENST00000477538 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
VHL-203ENST00000477538 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
VHL-203ENST00000477538 PARP10Q53GL7 1025 aa20.44■□□□□ 0.86
VHL-203ENST00000477538 NLRP10Q86W26 655 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms