RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 MYL6BP14649 208 aa20.37■□□□□ 0.85
COMMD6-209ENST00000477377 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
COMMD6-209ENST00000477377 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
COMMD6-209ENST00000477377 ERVV-1B6SEH8 477 aa20.36■□□□□ 0.85
COMMD6-209ENST00000477377 EIF2S2P20042 333 aaKnown RBP20.36■□□□□ 0.85
COMMD6-209ENST00000477377 BRIP1Q9BX63 1249 aa20.36■□□□□ 0.85
COMMD6-209ENST00000477377 MBIPQ9NS73 344 aa20.36■□□□□ 0.85
COMMD6-209ENST00000477377 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
COMMD6-209ENST00000477377 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
COMMD6-209ENST00000477377 MAP3K15Q6ZN16 1313 aa20.35■□□□□ 0.85
COMMD6-209ENST00000477377 ANXA1P04083 346 aa20.35■□□□□ 0.85
COMMD6-209ENST00000477377 DALRD3Q5D0E6 543 aaKnown RBP20.35■□□□□ 0.85
COMMD6-209ENST00000477377 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
COMMD6-209ENST00000477377 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
COMMD6-209ENST00000477377 NIP7Q9Y221 180 aaKnown RBP eCLIP20.34■□□□□ 0.85
COMMD6-209ENST00000477377 CNBD1Q8NA66 436 aa20.33■□□□□ 0.85
COMMD6-209ENST00000477377 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
COMMD6-209ENST00000477377 NUP98P52948 1817 aa20.32■□□□□ 0.84
COMMD6-209ENST00000477377 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
COMMD6-209ENST00000477377 ARHGAP27Q6ZUM4 889 aa20.32■□□□□ 0.84
COMMD6-209ENST00000477377 NECTIN2Q92692 538 aa20.32■□□□□ 0.84
COMMD6-209ENST00000477377 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
COMMD6-209ENST00000477377 COL11A2P13942 1736 aaPredicted RBP20.32■□□□□ 0.84
COMMD6-209ENST00000477377 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
COMMD6-209ENST00000477377 KLRG2A4D1S0 409 aaPredicted RBP20.31■□□□□ 0.84
COMMD6-209ENST00000477377 H0YIN7 160 aa20.31■□□□□ 0.84
COMMD6-209ENST00000477377 ZNF34Q8IZ26 560 aa20.31■□□□□ 0.84
COMMD6-209ENST00000477377 ZBTB3Q9H5J0 574 aa20.31■□□□□ 0.84
COMMD6-209ENST00000477377 UBN2Q6ZU65 1347 aa20.3■□□□□ 0.84
COMMD6-209ENST00000477377 PDE6BP35913 854 aa20.3■□□□□ 0.84
COMMD6-209ENST00000477377 CCDC27Q2M243 656 aa20.3■□□□□ 0.84
COMMD6-209ENST00000477377 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
COMMD6-209ENST00000477377 NBPF5PQ86XG9 351 aaPredicted RBP20.3■□□□□ 0.84
COMMD6-209ENST00000477377 DDX21Q9NR30 783 aaKnown RBP eCLIP20.3■□□□□ 0.84
COMMD6-209ENST00000477377 HOXB7P09629 217 aa20.29■□□□□ 0.84
COMMD6-209ENST00000477377 SRGNP10124 158 aa20.29■□□□□ 0.84
COMMD6-209ENST00000477377 PRELPP51888 382 aa20.29■□□□□ 0.84
COMMD6-209ENST00000477377 TTLL6Q8N841 843 aa20.29■□□□□ 0.84
COMMD6-209ENST00000477377 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
COMMD6-209ENST00000477377 GNAI1P63096 354 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 ST5P78524 1137 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
COMMD6-209ENST00000477377 SUSD4Q5VX71 490 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 DUSP27Q5VZP5 1158 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 TPTE2Q6XPS3 522 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 KIF6Q6ZMV9 814 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
COMMD6-209ENST00000477377 FAM177BA6PVY3 158 aa20.27■□□□□ 0.84
COMMD6-209ENST00000477377 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
COMMD6-209ENST00000477377 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
COMMD6-209ENST00000477377 GPTP24298 496 aa20.26■□□□□ 0.83
COMMD6-209ENST00000477377 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
COMMD6-209ENST00000477377 ZNF622Q969S3 477 aaKnown RBP eCLIP20.26■□□□□ 0.83
COMMD6-209ENST00000477377 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
COMMD6-209ENST00000477377 HDGFL1Q5TGJ6 251 aa20.25■□□□□ 0.83
COMMD6-209ENST00000477377 STYK1Q6J9G0 422 aa20.25■□□□□ 0.83
COMMD6-209ENST00000477377 NUTM1Q86Y26 1132 aa20.25■□□□□ 0.83
COMMD6-209ENST00000477377 SBF1O95248 1867 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 NTSR2O95665 410 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 CALD1Q05682 793 aaKnown RBP20.24■□□□□ 0.83
COMMD6-209ENST00000477377 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
COMMD6-209ENST00000477377 ERFEQ4G0M1 354 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 C9orf131Q5VYM1 1079 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 MASTLQ96GX5 879 aa20.24■□□□□ 0.83
COMMD6-209ENST00000477377 IBTKQ9P2D0 1353 aaPredicted RBP20.23■□□□□ 0.83
COMMD6-209ENST00000477377 TNRC6CQ9HCJ0 1690 aaKnown RBP20.23■□□□□ 0.83
COMMD6-209ENST00000477377 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
COMMD6-209ENST00000477377 NFKBIEO00221 500 aa20.23■□□□□ 0.83
COMMD6-209ENST00000477377 ELL2O00472 640 aaPredicted RBP20.23■□□□□ 0.83
COMMD6-209ENST00000477377 RASSF7Q02833 373 aa20.23■□□□□ 0.83
COMMD6-209ENST00000477377 CRY2Q49AN0 593 aa20.22■□□□□ 0.83
COMMD6-209ENST00000477377 TSR2Q969E8 191 aaKnown RBP20.22■□□□□ 0.83
COMMD6-209ENST00000477377 DBF4Q9UBU7 674 aaPredicted RBP20.22■□□□□ 0.83
COMMD6-209ENST00000477377 NPHP1O15259 732 aa20.21■□□□□ 0.83
COMMD6-209ENST00000477377 C21orf2O43822 256 aa20.21■□□□□ 0.83
COMMD6-209ENST00000477377 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
COMMD6-209ENST00000477377 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
COMMD6-209ENST00000477377 NPR1P16066 1061 aa20.2■□□□□ 0.82
COMMD6-209ENST00000477377 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
COMMD6-209ENST00000477377 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
COMMD6-209ENST00000477377 C3orf67Q6ZVT6 689 aa20.2■□□□□ 0.82
COMMD6-209ENST00000477377 RIC1Q4ADV7 1423 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 SLC10A5Q5PT55 438 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 PLBD2Q8NHP8 589 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
COMMD6-209ENST00000477377 PHAXQ9H814 394 aaKnown RBP20.19■□□□□ 0.82
COMMD6-209ENST00000477377 IL16Q14005 1332 aa20.19■□□□□ 0.82
COMMD6-209ENST00000477377 FER1L6Q2WGJ9 1857 aa20.18■□□□□ 0.82
COMMD6-209ENST00000477377 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
COMMD6-209ENST00000477377 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
COMMD6-209ENST00000477377 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
COMMD6-209ENST00000477377 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
COMMD6-209ENST00000477377 RNF181Q9P0P0 153 aa20.18■□□□□ 0.82
COMMD6-209ENST00000477377 ZNF219Q9P2Y4 722 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms