RNA–Protein interactions for RNA: ENST00000477216.1

SKIL-208, Transcript of SKI like proto-oncogene, human

TSL 4

Gene SKIL, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIL-208	ENST00000477216	AFDN	P55196	1824 aa	Known RBP	32.6	■■■□□ 2.81
SKIL-208	ENST00000477216	KCNQ3	O43525	872 aa		32.59	■■■□□ 2.81
SKIL-208	ENST00000477216	MIS18A	Q9NYP9	233 aa		32.59	■■■□□ 2.81
SKIL-208	ENST00000477216	PDE6B	P35913	854 aa		32.57	■■■□□ 2.8
SKIL-208	ENST00000477216	CALD1	Q05682	793 aa	Known RBP	32.57	■■■□□ 2.8
SKIL-208	ENST00000477216	WWC1	Q8IX03	1113 aa		32.57	■■■□□ 2.8
SKIL-208	ENST00000477216	NGEF	Q8N5V2	710 aa		32.57	■■■□□ 2.8
SKIL-208	ENST00000477216	UBR2	Q8IWV8	1755 aa		32.57	■■■□□ 2.8
SKIL-208	ENST00000477216	ZNF496	Q96IT1	587 aa	Predicted RBP	32.56	■■■□□ 2.8
SKIL-208	ENST00000477216	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.56	■■■□□ 2.8
SKIL-208	ENST00000477216	ZBTB1	Q9Y2K1	713 aa		32.56	■■■□□ 2.8
SKIL-208	ENST00000477216	NPM2	Q86SE8	214 aa	Known RBP	32.55	■■■□□ 2.8
SKIL-208	ENST00000477216	BABAM1	Q9NWV8	329 aa		32.54	■■■□□ 2.8
SKIL-208	ENST00000477216	TSPYL4	Q9UJ04	414 aa		32.54	■■■□□ 2.8
SKIL-208	ENST00000477216	KDM3B	Q7LBC6	1761 aa		32.53	■■■□□ 2.8
SKIL-208	ENST00000477216	HSPA1A	P0DMV8	641 aa	Known RBP	32.53	■■■□□ 2.8
SKIL-208	ENST00000477216	HSPA1B	P0DMV9	641 aa	Known RBP	32.53	■■■□□ 2.8
SKIL-208	ENST00000477216	FMNL2	Q96PY5	1086 aa		32.53	■■■□□ 2.8
SKIL-208	ENST00000477216	LAS1L	Q9Y4W2	734 aa	Known RBP	32.53	■■■□□ 2.8
SKIL-208	ENST00000477216	TIAM2	Q8IVF5	1701 aa		32.53	■■■□□ 2.8
SKIL-208	ENST00000477216	CAPN15	O75808	1086 aa		32.52	■■■□□ 2.8
SKIL-208	ENST00000477216	BRIP1	Q9BX63	1249 aa		32.52	■■■□□ 2.8
SKIL-208	ENST00000477216	HEG1	Q9ULI3	1381 aa		32.51	■■■□□ 2.79
SKIL-208	ENST00000477216	CHL1	O00533	1208 aa		32.51	■■■□□ 2.79
SKIL-208	ENST00000477216	SOGA3	Q5TF21	947 aa		32.51	■■■□□ 2.79
SKIL-208	ENST00000477216	PCNT	O95613	3336 aa		32.5	■■■□□ 2.79
SKIL-208	ENST00000477216	ERFE	Q4G0M1	354 aa		32.5	■■■□□ 2.79
SKIL-208	ENST00000477216	CFAP44	Q96MT7	982 aa		32.5	■■■□□ 2.79
SKIL-208	ENST00000477216	BCL2L12	Q9HB09	334 aa		32.5	■■■□□ 2.79
SKIL-208	ENST00000477216	CCDC88A	Q3V6T2	1871 aa		32.49	■■■□□ 2.79
SKIL-208	ENST00000477216	CANX	P27824	592 aa	Known RBP	32.49	■■■□□ 2.79
SKIL-208	ENST00000477216	EIF5	P55010	431 aa	Known RBP	32.49	■■■□□ 2.79
SKIL-208	ENST00000477216	IFT57	Q9NWB7	429 aa		32.49	■■■□□ 2.79
SKIL-208	ENST00000477216	NFKBIE	O00221	500 aa		32.48	■■■□□ 2.79
SKIL-208	ENST00000477216	ZNF853	P0CG23	659 aa		32.48	■■■□□ 2.79
SKIL-208	ENST00000477216	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
SKIL-208	ENST00000477216	CARMIL3	Q8ND23	1372 aa		32.47	■■■□□ 2.79
SKIL-208	ENST00000477216	EIF4A1	P60842	406 aa	Known RBP	32.47	■■■□□ 2.79
SKIL-208	ENST00000477216	GNAI1	P63096	354 aa		32.47	■■■□□ 2.79
SKIL-208	ENST00000477216	CREBZF	Q9NS37	354 aa		32.47	■■■□□ 2.79
SKIL-208	ENST00000477216	LTBP3	Q9NS15	1303 aa		32.47	■■■□□ 2.79
SKIL-208	ENST00000477216	WDR63	Q8IWG1	891 aa		32.46	■■■□□ 2.79
SKIL-208	ENST00000477216	CNKSR1	Q969H4	720 aa		32.46	■■■□□ 2.79
SKIL-208	ENST00000477216	IL16	Q14005	1332 aa		32.46	■■■□□ 2.79
SKIL-208	ENST00000477216	NPHP1	O15259	732 aa		32.45	■■■□□ 2.79
SKIL-208	ENST00000477216	BICDL1	Q6ZP65	573 aa		32.45	■■■□□ 2.79
SKIL-208	ENST00000477216	DICER1	Q9UPY3	1922 aa	Known RBP	32.44	■■■□□ 2.78
SKIL-208	ENST00000477216	CHADL	Q6NUI6	762 aa		32.44	■■■□□ 2.78
SKIL-208	ENST00000477216	TAOK3	Q9H2K8	898 aa		32.44	■■■□□ 2.78
SKIL-208	ENST00000477216	MBIP	Q9NS73	344 aa		32.44	■■■□□ 2.78
SKIL-208	ENST00000477216	IQCA1L	A6NCM1	817 aa		32.43	■■■□□ 2.78
SKIL-208	ENST00000477216	SNRPA1	P09661	255 aa	Known RBP	32.43	■■■□□ 2.78
SKIL-208	ENST00000477216	ZNF521	Q96K83	1311 aa		32.43	■■■□□ 2.78
SKIL-208	ENST00000477216	IL6ST	P40189	918 aa	Predicted RBP	32.42	■■■□□ 2.78
SKIL-208	ENST00000477216	C21orf2	O43822	256 aa		32.41	■■■□□ 2.78
SKIL-208	ENST00000477216	ST5	P78524	1137 aa		32.41	■■■□□ 2.78
SKIL-208	ENST00000477216	SETDB2	Q96T68	719 aa		32.41	■■■□□ 2.78
SKIL-208	ENST00000477216	POTEC	B2RU33	542 aa		32.4	■■■□□ 2.78
SKIL-208	ENST00000477216	PRAMEF22	A3QJZ6	481 aa		32.39	■■■□□ 2.78
SKIL-208	ENST00000477216	TBC1D9B	Q66K14	1250 aa		32.39	■■■□□ 2.78
SKIL-208	ENST00000477216	STYK1	Q6J9G0	422 aa		32.39	■■■□□ 2.78
SKIL-208	ENST00000477216	CNBD1	Q8NA66	436 aa		32.39	■■■□□ 2.78
SKIL-208	ENST00000477216	FER1L6	Q2WGJ9	1857 aa		32.38	■■■□□ 2.77
SKIL-208	ENST00000477216	PRR5L	Q6MZQ0	368 aa		32.37	■■■□□ 2.77
SKIL-208	ENST00000477216	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.36	■■■□□ 2.77
SKIL-208	ENST00000477216	USP16	Q9Y5T5	823 aa		32.36	■■■□□ 2.77
SKIL-208	ENST00000477216	SCN7A	Q01118	1682 aa		32.36	■■■□□ 2.77
SKIL-208	ENST00000477216	KRT24	Q2M2I5	525 aa		32.35	■■■□□ 2.77
SKIL-208	ENST00000477216	TSR2	Q969E8	191 aa	Known RBP	32.35	■■■□□ 2.77
SKIL-208	ENST00000477216	MASTL	Q96GX5	879 aa		32.35	■■■□□ 2.77
SKIL-208	ENST00000477216	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.34	■■■□□ 2.77
SKIL-208	ENST00000477216	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.34	■■■□□ 2.77
SKIL-208	ENST00000477216	ANKRD31	Q8N7Z5	1873 aa		32.33	■■■□□ 2.77
SKIL-208	ENST00000477216	LDHD	Q86WU2	507 aa		32.32	■■■□□ 2.76
SKIL-208	ENST00000477216	TBC1D2B	Q9UPU7	963 aa		32.32	■■■□□ 2.76
SKIL-208	ENST00000477216	FANCI	Q9NVI1	1328 aa		32.31	■■■□□ 2.76
SKIL-208	ENST00000477216	GOLGA2	Q08379	1002 aa		32.31	■■■□□ 2.76
SKIL-208	ENST00000477216	AIDA	Q96BJ3	306 aa		32.31	■■■□□ 2.76
SKIL-208	ENST00000477216	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.31	■■■□□ 2.76
SKIL-208	ENST00000477216	LAMB4	A4D0S4	1761 aa		32.3	■■■□□ 2.76
SKIL-208	ENST00000477216	SRGN	P10124	158 aa		32.3	■■■□□ 2.76
SKIL-208	ENST00000477216	PRPF40B	Q6NWY9	871 aa	Known RBP	32.3	■■■□□ 2.76
SKIL-208	ENST00000477216	MYH16	Q9H6N6	1097 aa		32.3	■■■□□ 2.76
SKIL-208	ENST00000477216	ZNF652	Q9Y2D9	606 aa		32.3	■■■□□ 2.76
SKIL-208	ENST00000477216	A1BG	P04217	495 aa		32.29	■■■□□ 2.76
SKIL-208	ENST00000477216	CLEC4G	Q6UXB4	293 aa		32.29	■■■□□ 2.76
SKIL-208	ENST00000477216	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.29	■■■□□ 2.76
SKIL-208	ENST00000477216	PRDM10	Q9NQV6	1147 aa		32.29	■■■□□ 2.76
SKIL-208	ENST00000477216	SCN4A	P35499	1836 aa		32.28	■■■□□ 2.76
SKIL-208	ENST00000477216	MKRN1	Q9UHC7	482 aa	Known RBP	32.28	■■■□□ 2.76
SKIL-208	ENST00000477216	CNTNAP1	P78357	1384 aa		32.28	■■■□□ 2.76
SKIL-208	ENST00000477216	DDN	O94850	711 aa	Predicted RBP	32.27	■■■□□ 2.76
SKIL-208	ENST00000477216	CCDC93	Q567U6	631 aa		32.27	■■■□□ 2.76
SKIL-208	ENST00000477216	DUSP27	Q5VZP5	1158 aa		32.27	■■■□□ 2.76
SKIL-208	ENST00000477216	RGL2	O15211	777 aa		32.26	■■■□□ 2.75
SKIL-208	ENST00000477216	HOXB7	P09629	217 aa		32.26	■■■□□ 2.75
SKIL-208	ENST00000477216	C8orf58	Q8NAV2	365 aa		32.26	■■■□□ 2.75
SKIL-208	ENST00000477216	ARFGEF2	Q9Y6D5	1785 aa		32.26	■■■□□ 2.75
SKIL-208	ENST00000477216	COL11A2	P13942	1736 aa	Predicted RBP	32.26	■■■□□ 2.75
SKIL-208	ENST00000477216		E9PSI1	815 aa		32.25	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms