RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
APTX-220ENST00000476858 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
APTX-220ENST00000476858 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
APTX-220ENST00000476858 NLGN1Q8N2Q7 840 aa16.24■□□□□ 0.19
APTX-220ENST00000476858 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
APTX-220ENST00000476858 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
APTX-220ENST00000476858 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
APTX-220ENST00000476858 HLFQ16534 295 aa16.23■□□□□ 0.19
APTX-220ENST00000476858 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
APTX-220ENST00000476858 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
APTX-220ENST00000476858 DUSP27Q5VZP5 1158 aa16.22■□□□□ 0.19
APTX-220ENST00000476858 CARMIL3Q8ND23 1372 aa16.22■□□□□ 0.19
APTX-220ENST00000476858 C10orf71Q711Q0 1435 aa16.21■□□□□ 0.19
APTX-220ENST00000476858 GNAI1P63096 354 aa16.21■□□□□ 0.19
APTX-220ENST00000476858 NRXN2Q9P2S2 1712 aa16.2■□□□□ 0.18
APTX-220ENST00000476858 A0A087WZG4 1122 aa16.2■□□□□ 0.18
APTX-220ENST00000476858 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
APTX-220ENST00000476858 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
APTX-220ENST00000476858 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
APTX-220ENST00000476858 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
APTX-220ENST00000476858 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
APTX-220ENST00000476858 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
APTX-220ENST00000476858 YBX3P16989 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
APTX-220ENST00000476858 ZBTB3Q9H5J0 574 aa16.19■□□□□ 0.18
APTX-220ENST00000476858 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
APTX-220ENST00000476858 GOLGB1Q14789 3259 aaKnown RBP16.19■□□□□ 0.18
APTX-220ENST00000476858 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
APTX-220ENST00000476858 SERPINB2P05120 415 aa16.18■□□□□ 0.18
APTX-220ENST00000476858 HDGFL1Q5TGJ6 251 aa16.18■□□□□ 0.18
APTX-220ENST00000476858 ZNF428Q96B54 188 aa16.18■□□□□ 0.18
APTX-220ENST00000476858 CD2APQ9Y5K6 639 aa16.18■□□□□ 0.18
APTX-220ENST00000476858 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
APTX-220ENST00000476858 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
APTX-220ENST00000476858 XAGE3Q8WTP9 111 aa16.17■□□□□ 0.18
APTX-220ENST00000476858 DPEP1P16444 411 aa16.16■□□□□ 0.18
APTX-220ENST00000476858 KCNA3P22001 575 aa16.16■□□□□ 0.18
APTX-220ENST00000476858 CHRNA5P30532 468 aa16.16■□□□□ 0.18
APTX-220ENST00000476858 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
APTX-220ENST00000476858 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
APTX-220ENST00000476858 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
APTX-220ENST00000476858 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
APTX-220ENST00000476858 IL16Q14005 1332 aa16.16■□□□□ 0.18
APTX-220ENST00000476858 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
APTX-220ENST00000476858 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
APTX-220ENST00000476858 PHAXQ9H814 394 aaKnown RBP16.15■□□□□ 0.18
APTX-220ENST00000476858 DDX21Q9NR30 783 aaKnown RBP eCLIP16.15■□□□□ 0.18
APTX-220ENST00000476858 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
APTX-220ENST00000476858 MAP3K15Q6ZN16 1313 aa16.15■□□□□ 0.18
APTX-220ENST00000476858 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
APTX-220ENST00000476858 NUP98P52948 1817 aa16.15■□□□□ 0.18
APTX-220ENST00000476858 UTRNP46939 3433 aa16.14■□□□□ 0.17
APTX-220ENST00000476858 GPTP24298 496 aa16.14■□□□□ 0.17
APTX-220ENST00000476858 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
APTX-220ENST00000476858 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
APTX-220ENST00000476858 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
APTX-220ENST00000476858 HOXB7P09629 217 aa16.13■□□□□ 0.17
APTX-220ENST00000476858 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
APTX-220ENST00000476858 COL11A2P13942 1736 aaPredicted RBP16.12■□□□□ 0.17
APTX-220ENST00000476858 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
APTX-220ENST00000476858 G2E3Q7L622 706 aa16.12■□□□□ 0.17
APTX-220ENST00000476858 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
APTX-220ENST00000476858 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
APTX-220ENST00000476858 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
APTX-220ENST00000476858 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
APTX-220ENST00000476858 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
APTX-220ENST00000476858 SETDB2Q96T68 719 aa16.11■□□□□ 0.17
APTX-220ENST00000476858 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
APTX-220ENST00000476858 ABCC12Q96J65 1359 aa16.11■□□□□ 0.17
APTX-220ENST00000476858 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
APTX-220ENST00000476858 GPR162Q16538 588 aa16.1■□□□□ 0.17
APTX-220ENST00000476858 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
APTX-220ENST00000476858 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
APTX-220ENST00000476858 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
APTX-220ENST00000476858 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
APTX-220ENST00000476858 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
APTX-220ENST00000476858 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
APTX-220ENST00000476858 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
APTX-220ENST00000476858 VAMP4O75379 141 aa16.09■□□□□ 0.17
APTX-220ENST00000476858 SLC51AQ86UW1 340 aa16.09■□□□□ 0.17
APTX-220ENST00000476858 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
APTX-220ENST00000476858 TGFB2P61812 414 aa16.08■□□□□ 0.16
APTX-220ENST00000476858 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.16
APTX-220ENST00000476858 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
APTX-220ENST00000476858 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
APTX-220ENST00000476858 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
APTX-220ENST00000476858 SLFN5Q08AF3 891 aa16.07■□□□□ 0.16
APTX-220ENST00000476858 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
APTX-220ENST00000476858 CNBD1Q8NA66 436 aa16.07■□□□□ 0.16
APTX-220ENST00000476858 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
APTX-220ENST00000476858 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
APTX-220ENST00000476858 NTSR2O95665 410 aa16.06■□□□□ 0.16
APTX-220ENST00000476858 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
APTX-220ENST00000476858 C2CD5Q86YS7 1000 aa16.06■□□□□ 0.16
APTX-220ENST00000476858 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
APTX-220ENST00000476858 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
APTX-220ENST00000476858 DLEC1Q9Y238 1755 aa16.05■□□□□ 0.16
APTX-220ENST00000476858 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
APTX-220ENST00000476858 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
APTX-220ENST00000476858 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
APTX-220ENST00000476858 ADCY9O60503 1353 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms