RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 SSH1Q8WYL5 1049 aa11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.54
SPTAN1-207ENST00000476825 ATP10DQ9P241 1426 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 ADCY9O60503 1353 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 CAMTA2O94983 1202 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 RARSP54136 660 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 PHAXQ9H814 394 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
SPTAN1-207ENST00000476825 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 RGL2O15211 777 aa11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 DZIP3Q86Y13 1208 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 CHMP4AQ9BY43 222 aa11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 SRP68Q9UHB9 627 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-207ENST00000476825 CACNA1SQ13698 1873 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 A0A087WZG4 1122 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 GYS1P13807 737 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 COPS6Q7L5N1 327 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 BCL2L13Q9BXK5 485 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-207ENST00000476825 RFC4P35249 363 aa11.67□□□□□ -0.54
SPTAN1-207ENST00000476825 FLIIQ13045 1269 aa11.67□□□□□ -0.54
SPTAN1-207ENST00000476825 USPL1Q5W0Q7 1092 aa11.67□□□□□ -0.54
SPTAN1-207ENST00000476825 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
SPTAN1-207ENST00000476825 ERVV-1B6SEH8 477 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 BCAR3O75815 825 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 HLFQ16534 295 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 PLBD2Q8NHP8 589 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 SLC16A10Q8TF71 515 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
SPTAN1-207ENST00000476825 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-207ENST00000476825 FKBP8Q14318 412 aa11.65□□□□□ -0.54
SPTAN1-207ENST00000476825 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-207ENST00000476825 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
SPTAN1-207ENST00000476825 IBTKQ9P2D0 1353 aaPredicted RBP11.65□□□□□ -0.55
SPTAN1-207ENST00000476825 SPEF2Q9C093 1822 aa11.65□□□□□ -0.55
SPTAN1-207ENST00000476825 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 PTPRCP08575 1304 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 ZPR1O75312 459 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 DDR1Q08345 913 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 CLEC4GQ6UXB4 293 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 KSR2Q6VAB6 950 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 RCAN3Q9UKA8 241 aa11.64□□□□□ -0.55
SPTAN1-207ENST00000476825 C10orf71Q711Q0 1435 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 PI4KAP2A4QPH2 592 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 TM4SF1P30408 202 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 PTGER2P43116 358 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 FKBP5Q13451 457 aaPredicted RBP11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 NFIXQ14938 502 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 MSL1Q68DK7 614 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 PI4KAP1Q8N8J0 262 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 ISCA1Q9BUE6 129 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 TAF1P21675 1872 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
SPTAN1-207ENST00000476825 ABCC4O15439 1325 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 RIC1Q4ADV7 1423 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 ZBTB7AO95365 584 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 DDX58O95786 925 aaKnown RBP11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 TCIRG1Q13488 830 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 NPM2Q86SE8 214 aaKnown RBP11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 NLGN1Q8N2Q7 840 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 METTL22Q9BUU2 404 aaPredicted RBP11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 ZNF652Q9Y2D9 606 aa11.62□□□□□ -0.55
SPTAN1-207ENST00000476825 F6X3S4 739 aa11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 IGKV5-2P06315 115 aa11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 TRIM27P14373 513 aa11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 KCNA4P22459 653 aa11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 DNAAF4Q8WXU2 420 aa11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 ARHGAP45Q92619 1136 aa11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-207ENST00000476825 LRRC37AA6NMS7 1700 aa11.6□□□□□ -0.55
SPTAN1-207ENST00000476825 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
SPTAN1-207ENST00000476825 COL4A1P02462 1669 aa11.6□□□□□ -0.55
SPTAN1-207ENST00000476825 ABCC12Q96J65 1359 aa11.6□□□□□ -0.55
SPTAN1-207ENST00000476825 MMP10P09238 476 aa11.6□□□□□ -0.55
SPTAN1-207ENST00000476825 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
SPTAN1-207ENST00000476825 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms