RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
HDAC3-208ENST00000476739 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
HDAC3-208ENST00000476739 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
HDAC3-208ENST00000476739 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
HDAC3-208ENST00000476739 C10orf71Q711Q0 1435 aa12.56□□□□□ -0.4
HDAC3-208ENST00000476739 NUP98P52948 1817 aa12.56□□□□□ -0.4
HDAC3-208ENST00000476739 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
HDAC3-208ENST00000476739 SERPINB2P05120 415 aa12.56□□□□□ -0.4
HDAC3-208ENST00000476739 AIMP1Q12904 312 aaKnown RBP12.56□□□□□ -0.4
HDAC3-208ENST00000476739 COPS6Q7L5N1 327 aa12.56□□□□□ -0.4
HDAC3-208ENST00000476739 XAGE3Q8WTP9 111 aa12.56□□□□□ -0.4
HDAC3-208ENST00000476739 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDAC3-208ENST00000476739 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
HDAC3-208ENST00000476739 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
HDAC3-208ENST00000476739 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
HDAC3-208ENST00000476739 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
HDAC3-208ENST00000476739 N4BP2Q86UW6 1770 aaPredicted RBP12.55□□□□□ -0.4
HDAC3-208ENST00000476739 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
HDAC3-208ENST00000476739 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
HDAC3-208ENST00000476739 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
HDAC3-208ENST00000476739 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
HDAC3-208ENST00000476739 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
HDAC3-208ENST00000476739 KIF6Q6ZMV9 814 aa12.54□□□□□ -0.4
HDAC3-208ENST00000476739 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
HDAC3-208ENST00000476739 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
HDAC3-208ENST00000476739 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
HDAC3-208ENST00000476739 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 VAMP4O75379 141 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 DPEP1P16444 411 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 SETDB2Q96T68 719 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 NIP7Q9Y221 180 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDAC3-208ENST00000476739 ZNF652Q9Y2D9 606 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
HDAC3-208ENST00000476739 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
HDAC3-208ENST00000476739 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.411e-7■□□□□ 10.3
HDAC3-208ENST00000476739 GPTP24298 496 aa12.52□□□□□ -0.41
HDAC3-208ENST00000476739 CHRNA5P30532 468 aa12.52□□□□□ -0.41
HDAC3-208ENST00000476739 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
HDAC3-208ENST00000476739 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
HDAC3-208ENST00000476739 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
HDAC3-208ENST00000476739 RGL2O15211 777 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 KCNA3P22001 575 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 TGFB2P61812 414 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 HYPKQ9NX55 129 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
HDAC3-208ENST00000476739 GPR162Q16538 588 aa12.5□□□□□ -0.41
HDAC3-208ENST00000476739 G2E3Q7L622 706 aa12.5□□□□□ -0.41
HDAC3-208ENST00000476739 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-208ENST00000476739 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
HDAC3-208ENST00000476739 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
HDAC3-208ENST00000476739 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
HDAC3-208ENST00000476739 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
HDAC3-208ENST00000476739 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
HDAC3-208ENST00000476739 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
HDAC3-208ENST00000476739 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
HDAC3-208ENST00000476739 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
HDAC3-208ENST00000476739 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
HDAC3-208ENST00000476739 E9PSI1 815 aa12.48□□□□□ -0.41
HDAC3-208ENST00000476739 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
HDAC3-208ENST00000476739 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
HDAC3-208ENST00000476739 TRMT2AQ8IZ69 625 aaKnown RBP12.48□□□□□ -0.41
HDAC3-208ENST00000476739 UTRNP46939 3433 aa12.48□□□□□ -0.41
HDAC3-208ENST00000476739 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
HDAC3-208ENST00000476739 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 NTSR2O95665 410 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 HNRNPUQ00839 825 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC3-208ENST00000476739 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 TPTE2Q6XPS3 522 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
HDAC3-208ENST00000476739 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
HDAC3-208ENST00000476739 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 ATP5J2-PTCD1G3V325 749 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 NPHP1O15259 732 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 ST5P78524 1137 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 NLRP10Q86W26 655 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 BCS1LQ9Y276 419 aa12.46□□□□□ -0.41
HDAC3-208ENST00000476739 ADCY9O60503 1353 aa12.45□□□□□ -0.42
HDAC3-208ENST00000476739 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
HDAC3-208ENST00000476739 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
HDAC3-208ENST00000476739 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
HDAC3-208ENST00000476739 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
HDAC3-208ENST00000476739 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
HDAC3-208ENST00000476739 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
HDAC3-208ENST00000476739 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
HDAC3-208ENST00000476739 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
HDAC3-208ENST00000476739 H0YIN7 160 aa12.44□□□□□ -0.42
HDAC3-208ENST00000476739 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
HDAC3-208ENST00000476739 PDE6BP35913 854 aa12.44□□□□□ -0.42
HDAC3-208ENST00000476739 FLIIQ13045 1269 aa12.44□□□□□ -0.42
HDAC3-208ENST00000476739 KSR2Q6VAB6 950 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms