RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
HLA-DPA1-246ENST00000476642 ZNF428Q96B54 188 aa16.97■□□□□ 0.31
HLA-DPA1-246ENST00000476642 BCORQ6W2J9 1755 aa16.97■□□□□ 0.31
HLA-DPA1-246ENST00000476642 GYS1P13807 737 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 CHPF2Q9P2E5 772 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
HLA-DPA1-246ENST00000476642 ERVV-1B6SEH8 477 aa16.95■□□□□ 0.3
HLA-DPA1-246ENST00000476642 VAMP4O75379 141 aa16.95■□□□□ 0.3
HLA-DPA1-246ENST00000476642 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
HLA-DPA1-246ENST00000476642 PDIA6Q15084 440 aa16.95■□□□□ 0.3
HLA-DPA1-246ENST00000476642 TBC1D2BQ9UPU7 963 aa16.95■□□□□ 0.3
HLA-DPA1-246ENST00000476642 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
HLA-DPA1-246ENST00000476642 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
HLA-DPA1-246ENST00000476642 SRP68Q9UHB9 627 aaKnown RBP16.94■□□□□ 0.3
HLA-DPA1-246ENST00000476642 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
HLA-DPA1-246ENST00000476642 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
HLA-DPA1-246ENST00000476642 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-246ENST00000476642 MMP10P09238 476 aa16.93■□□□□ 0.3
HLA-DPA1-246ENST00000476642 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
HLA-DPA1-246ENST00000476642 ATP10DQ9P241 1426 aa16.93■□□□□ 0.3
HLA-DPA1-246ENST00000476642 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
HLA-DPA1-246ENST00000476642 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
HLA-DPA1-246ENST00000476642 NUP98P52948 1817 aa16.91■□□□□ 0.3
HLA-DPA1-246ENST00000476642 FKBP8Q14318 412 aa16.91■□□□□ 0.3
HLA-DPA1-246ENST00000476642 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
HLA-DPA1-246ENST00000476642 LRP10Q7Z4F1 713 aa16.91■□□□□ 0.3
HLA-DPA1-246ENST00000476642 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
HLA-DPA1-246ENST00000476642 ANXA1P04083 346 aa16.9■□□□□ 0.3
HLA-DPA1-246ENST00000476642 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
HLA-DPA1-246ENST00000476642 AIMP1Q12904 312 aaKnown RBP16.9■□□□□ 0.3
HLA-DPA1-246ENST00000476642 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
HLA-DPA1-246ENST00000476642 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
HLA-DPA1-246ENST00000476642 TM4SF1P30408 202 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 ALDH1L2Q3SY69 923 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 GIGYF2Q6Y7W6 1299 aaKnown RBP16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 ANKRD13DQ6ZTN6 518 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 CARMIL3Q8ND23 1372 aa16.89■□□□□ 0.29
HLA-DPA1-246ENST00000476642 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
HLA-DPA1-246ENST00000476642 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
HLA-DPA1-246ENST00000476642 TGFB2P61812 414 aa16.87■□□□□ 0.29
HLA-DPA1-246ENST00000476642 NFIXQ14938 502 aa16.87■□□□□ 0.29
HLA-DPA1-246ENST00000476642 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
HLA-DPA1-246ENST00000476642 NIP7Q9Y221 180 aaKnown RBP eCLIP16.87■□□□□ 0.29
HLA-DPA1-246ENST00000476642 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
HLA-DPA1-246ENST00000476642 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
HLA-DPA1-246ENST00000476642 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
HLA-DPA1-246ENST00000476642 PHAXQ9H814 394 aaKnown RBP16.86■□□□□ 0.29
HLA-DPA1-246ENST00000476642 ARFGEF2Q9Y6D5 1785 aa16.86■□□□□ 0.29
HLA-DPA1-246ENST00000476642 POLRMTO00411 1230 aaKnown RBP16.85■□□□□ 0.29
HLA-DPA1-246ENST00000476642 NPHP1O15259 732 aa16.85■□□□□ 0.29
HLA-DPA1-246ENST00000476642 FLIIQ13045 1269 aa16.85■□□□□ 0.29
HLA-DPA1-246ENST00000476642 HLFQ16534 295 aa16.85■□□□□ 0.29
HLA-DPA1-246ENST00000476642 BICDL1Q6ZP65 573 aa16.85■□□□□ 0.29
HLA-DPA1-246ENST00000476642 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
HLA-DPA1-246ENST00000476642 NRXN2Q9P2S2 1712 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 SERPINB2P05120 415 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 TPTE2Q6XPS3 522 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
HLA-DPA1-246ENST00000476642 ADCY9O60503 1353 aa16.83■□□□□ 0.28
HLA-DPA1-246ENST00000476642 DDR1Q08345 913 aa16.83■□□□□ 0.28
HLA-DPA1-246ENST00000476642 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.28
HLA-DPA1-246ENST00000476642 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
HLA-DPA1-246ENST00000476642 ZNF34Q8IZ26 560 aa16.83■□□□□ 0.28
HLA-DPA1-246ENST00000476642 IBTKQ9P2D0 1353 aaPredicted RBP16.83■□□□□ 0.28
HLA-DPA1-246ENST00000476642 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PTPRCP08575 1304 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 GTF2E1P29083 439 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 ST5P78524 1137 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 NBPF5PQ86XG9 351 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 SMC4Q9NTJ3 1288 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 DPEP1P16444 411 aa16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 TRIM28Q13263 835 aaKnown RBP16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 MRPL50Q8N5N7 158 aaKnown RBP16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 SSH1Q8WYL5 1049 aa16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
HLA-DPA1-246ENST00000476642 C10orf71Q711Q0 1435 aa16.8■□□□□ 0.28
HLA-DPA1-246ENST00000476642 KIF16BQ96L93 1317 aa16.8■□□□□ 0.28
HLA-DPA1-246ENST00000476642 GPTP24298 496 aa16.8■□□□□ 0.28
HLA-DPA1-246ENST00000476642 BRPF1P55201 1214 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms