RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
SSR3-206ENST00000476217 NSFL1CQ9UNZ2 370 aaKnown RBP9.09□□□□□ -0.95
SSR3-206ENST00000476217 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
SSR3-206ENST00000476217 WIPF1O43516 503 aa9.08□□□□□ -0.96
SSR3-206ENST00000476217 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
SSR3-206ENST00000476217 MYO19Q96H55 970 aa9.08□□□□□ -0.96
SSR3-206ENST00000476217 HCN4Q9Y3Q4 1203 aa9.08□□□□□ -0.96
SSR3-206ENST00000476217 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
SSR3-206ENST00000476217 GTPBP3Q969Y2 492 aaKnown RBP9.07□□□□□ -0.96
SSR3-206ENST00000476217 MTMR7Q9Y216 660 aa9.07□□□□□ -0.96
SSR3-206ENST00000476217 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
SSR3-206ENST00000476217 LAMC2Q13753 1193 aa9.06□□□□□ -0.96
SSR3-206ENST00000476217 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
SSR3-206ENST00000476217 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
SSR3-206ENST00000476217 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
SSR3-206ENST00000476217 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
SSR3-206ENST00000476217 IER5Q5VY09 327 aa9.05□□□□□ -0.96
SSR3-206ENST00000476217 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
SSR3-206ENST00000476217 ZCCHC2Q9C0B9 1178 aaKnown RBP9.05□□□□□ -0.96
SSR3-206ENST00000476217 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
SSR3-206ENST00000476217 GMPRP36959 345 aa9.04□□□□□ -0.96
SSR3-206ENST00000476217 UBAP2LQ14157 1087 aaKnown RBP9.04□□□□□ -0.96
SSR3-206ENST00000476217 NGLY1Q96IV0 654 aa9.04□□□□□ -0.96
SSR3-206ENST00000476217 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
SSR3-206ENST00000476217 LGR5O75473 907 aa9.03□□□□□ -0.96
SSR3-206ENST00000476217 THBS1P07996 1170 aa9.03□□□□□ -0.96
SSR3-206ENST00000476217 SSFA2P28290 1259 aa9.03□□□□□ -0.96
SSR3-206ENST00000476217 INSM1Q01101 510 aaPredicted RBP9.03□□□□□ -0.96
SSR3-206ENST00000476217 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
SSR3-206ENST00000476217 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
SSR3-206ENST00000476217 NDFIP2Q9NV92 336 aa9.03□□□□□ -0.96
SSR3-206ENST00000476217 TGFBR3LH3BV60 316 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 MX2P20592 715 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 MAP2K3P46734 347 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 SRSF11Q05519 484 aaKnown RBP9.02□□□□□ -0.97
SSR3-206ENST00000476217 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 C16orf46Q6P387 395 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 RETREG2Q8NC44 543 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 SUSD3Q96L08 255 aa9.02□□□□□ -0.97
SSR3-206ENST00000476217 BNIP3LO60238 219 aa9.01□□□□□ -0.97
SSR3-206ENST00000476217 FGFR3P22607 806 aa9.01□□□□□ -0.97
SSR3-206ENST00000476217 QTRT2Q9H974 415 aaKnown RBP9.01□□□□□ -0.97
SSR3-206ENST00000476217 GPR25O00155 361 aa9□□□□□ -0.97
SSR3-206ENST00000476217 EPB42P16452 691 aa9□□□□□ -0.97
SSR3-206ENST00000476217 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
SSR3-206ENST00000476217 TNP2Q05952 138 aa9□□□□□ -0.97
SSR3-206ENST00000476217 KHNYNO15037 678 aaKnown RBP8.99□□□□□ -0.97
SSR3-206ENST00000476217 EFSO43281 561 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
SSR3-206ENST00000476217 GAS6Q14393 721 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 ABHD17AQ96GS6 310 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 C11orf16Q9NQ32 467 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 MARK1Q9P0L2 795 aa8.99□□□□□ -0.97
SSR3-206ENST00000476217 KCNQ4P56696 695 aa8.98□□□□□ -0.97
SSR3-206ENST00000476217 DGKZQ13574 1117 aa8.98□□□□□ -0.97
SSR3-206ENST00000476217 BTLAQ7Z6A9 289 aa8.98□□□□□ -0.97
SSR3-206ENST00000476217 CEP63Q96MT8 703 aa8.98□□□□□ -0.97
SSR3-206ENST00000476217 AVENQ9NQS1 362 aaPredicted RBP8.98□□□□□ -0.97
SSR3-206ENST00000476217 FAM13BQ9NYF5 915 aa8.98□□□□□ -0.97
SSR3-206ENST00000476217 SLAIN2Q9P270 581 aa8.98□□□□□ -0.97
SSR3-206ENST00000476217 CECR2Q9BXF3 1484 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 DCDC2BA2VCK2 349 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 SLURP2P0DP57 97 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 COX20Q5RI15 118 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 ABTB2Q8N961 1025 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 HSH2DQ96JZ2 352 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 BRD7Q9NPI1 651 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 LRRC4BQ9NT99 713 aa8.97□□□□□ -0.97
SSR3-206ENST00000476217 BAZ1AQ9NRL2 1556 aaPredicted RBP8.96□□□□□ -0.97
SSR3-206ENST00000476217 BMP4P12644 408 aa8.96□□□□□ -0.98
SSR3-206ENST00000476217 KRT76Q01546 638 aa8.96□□□□□ -0.98
SSR3-206ENST00000476217 TYRO3Q06418 890 aa8.96□□□□□ -0.98
SSR3-206ENST00000476217 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
SSR3-206ENST00000476217 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
SSR3-206ENST00000476217 IGF1RP08069 1367 aa8.96□□□□□ -0.98
SSR3-206ENST00000476217 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
SSR3-206ENST00000476217 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
SSR3-206ENST00000476217 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
SSR3-206ENST00000476217 GDF2Q9UK05 429 aaPredicted RBP8.95□□□□□ -0.98
SSR3-206ENST00000476217 LRFN2Q9ULH4 789 aa8.95□□□□□ -0.98
SSR3-206ENST00000476217 KCNH4Q9UQ05 1017 aa8.95□□□□□ -0.98
SSR3-206ENST00000476217 FAM181BA6NEQ2 426 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 ARSDP51689 593 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 HELQQ8TDG4 1101 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 KLK14Q9P0G3 267 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 STIM2Q9P246 746 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 SMARCA4P51532 1647 aa8.94□□□□□ -0.98
SSR3-206ENST00000476217 PATL2C9JE40 543 aaKnown RBP8.93□□□□□ -0.98
SSR3-206ENST00000476217 BRD1O95696 1058 aa8.93□□□□□ -0.98
SSR3-206ENST00000476217 ARAFP10398 606 aa8.93□□□□□ -0.98
SSR3-206ENST00000476217 SF3B2Q13435 895 aaKnown RBP8.93□□□□□ -0.98
SSR3-206ENST00000476217 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
SSR3-206ENST00000476217 ZSCAN1Q8NBB4 408 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms