RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
TMEM254-211ENST00000476173 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
TMEM254-211ENST00000476173 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
TMEM254-211ENST00000476173 STK32BQ9NY57 414 aa12.52□□□□□ -0.41
TMEM254-211ENST00000476173 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
TMEM254-211ENST00000476173 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
TMEM254-211ENST00000476173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
TMEM254-211ENST00000476173 SOCS7O14512 581 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 SSFA2P28290 1259 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 FLIIQ13045 1269 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
TMEM254-211ENST00000476173 COL15A1P39059 1388 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
TMEM254-211ENST00000476173 A0A087WZG4 1122 aa12.5□□□□□ -0.41
TMEM254-211ENST00000476173 PHF14O94880 888 aa12.5□□□□□ -0.41
TMEM254-211ENST00000476173 AIMP1Q12904 312 aaKnown RBP12.5□□□□□ -0.41
TMEM254-211ENST00000476173 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
TMEM254-211ENST00000476173 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
TMEM254-211ENST00000476173 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
TMEM254-211ENST00000476173 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
TMEM254-211ENST00000476173 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
TMEM254-211ENST00000476173 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
TMEM254-211ENST00000476173 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-211ENST00000476173 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
TMEM254-211ENST00000476173 PTPRCP08575 1304 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 MAP3K15Q6ZN16 1313 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 KIF16BQ96L93 1317 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 RFC4P35249 363 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
TMEM254-211ENST00000476173 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 ARHGAP45Q92619 1136 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 ARXQ96QS3 562 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 NARFQ9UHQ1 456 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
TMEM254-211ENST00000476173 ADCY9O60503 1353 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 ERVV-1B6SEH8 477 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 IPO8O15397 1037 aaKnown RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 FRAT1Q92837 279 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
TMEM254-211ENST00000476173 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
TMEM254-211ENST00000476173 F6X3S4 739 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 RGL2O15211 777 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 ZPR1O75312 459 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 TRIM27P14373 513 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 HLFQ16534 295 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 PDGFDQ9GZP0 370 aaPredicted RBP12.46□□□□□ -0.41
TMEM254-211ENST00000476173 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 MAP3K2Q9Y2U5 619 aa12.46□□□□□ -0.41
TMEM254-211ENST00000476173 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
TMEM254-211ENST00000476173 PLIN1O60240 522 aa12.45□□□□□ -0.42
TMEM254-211ENST00000476173 R3HDM1Q15032 1099 aaKnown RBP12.45□□□□□ -0.42
TMEM254-211ENST00000476173 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
TMEM254-211ENST00000476173 API5Q9BZZ5 524 aaKnown RBP12.45□□□□□ -0.42
TMEM254-211ENST00000476173 TNNQ9UQP3 1299 aa12.45□□□□□ -0.42
TMEM254-211ENST00000476173 NUP98P52948 1817 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 BCORQ6W2J9 1755 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 GYS1P13807 737 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 CLEC4GQ6UXB4 293 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
TMEM254-211ENST00000476173 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
TMEM254-211ENST00000476173 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
TMEM254-211ENST00000476173 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
TMEM254-211ENST00000476173 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
TMEM254-211ENST00000476173 RRP1P56182 461 aaKnown RBP12.43□□□□□ -0.42
TMEM254-211ENST00000476173 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
TMEM254-211ENST00000476173 ZNF652Q9Y2D9 606 aa12.43□□□□□ -0.42
TMEM254-211ENST00000476173 ABCC4O15439 1325 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-211ENST00000476173 ATP5J2-PTCD1G3V325 749 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 BEND3Q5T5X7 828 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-211ENST00000476173 ZNF34Q8IZ26 560 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 CLUAP1Q96AJ1 413 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 MYD88Q99836 296 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 ISCA1Q9BUE6 129 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 ATP10DQ9P241 1426 aa12.42□□□□□ -0.42
TMEM254-211ENST00000476173 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
TMEM254-211ENST00000476173 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms