RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 DNAAF4Q8WXU2 420 aa15.38■□□□□ 0.05
MRPL55-227ENST00000475832 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
MRPL55-227ENST00000475832 ZBTB40Q9NUA8 1239 aa15.38■□□□□ 0.05
MRPL55-227ENST00000475832 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-227ENST00000475832 HDAC5Q9UQL6 1122 aa15.38■□□□□ 0.05
MRPL55-227ENST00000475832 F6X3S4 739 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 GNAI3P08754 354 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 NEXNQ0ZGT2 675 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 ZNF827Q17R98 1081 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 RIC3Q7Z5B4 369 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 SRCIN1Q9C0H9 1055 aa15.37■□□□□ 0.05
MRPL55-227ENST00000475832 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
MRPL55-227ENST00000475832 ANXA1P04083 346 aa15.36■□□□□ 0.05
MRPL55-227ENST00000475832 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
MRPL55-227ENST00000475832 KCNQ4P56696 695 aa15.36■□□□□ 0.05
MRPL55-227ENST00000475832 AIMP1Q12904 312 aaKnown RBP15.36■□□□□ 0.05
MRPL55-227ENST00000475832 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
MRPL55-227ENST00000475832 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
MRPL55-227ENST00000475832 PDIA6Q15084 440 aa15.35■□□□□ 0.05
MRPL55-227ENST00000475832 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
MRPL55-227ENST00000475832 COPS6Q7L5N1 327 aa15.35■□□□□ 0.05
MRPL55-227ENST00000475832 XAGE3Q8WTP9 111 aa15.35■□□□□ 0.05
MRPL55-227ENST00000475832 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
MRPL55-227ENST00000475832 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 LOC102724428A0A0B4J2F2 783 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 CAPN15O75808 1086 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 ALDH1L1O75891 902 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 SIK1P57059 783 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 ANKRD13DQ6ZTN6 518 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
MRPL55-227ENST00000475832 C5P01031 1676 aa15.33■□□□□ 0.04
MRPL55-227ENST00000475832 GNAI2P04899 355 aa15.33■□□□□ 0.04
MRPL55-227ENST00000475832 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-227ENST00000475832 RPAP2Q8IXW5 612 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-227ENST00000475832 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-227ENST00000475832 PCDHB15Q9Y5E8 787 aa15.33■□□□□ 0.04
MRPL55-227ENST00000475832 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.04
MRPL55-227ENST00000475832 HMMRO75330 724 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 A1BGP04217 495 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 KIF6Q6ZMV9 814 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 LINS1Q8NG48 757 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 PLBD2Q8NHP8 589 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 ADCY9O60503 1353 aa15.32■□□□□ 0.04
MRPL55-227ENST00000475832 GRIN3BO60391 1043 aa15.31■□□□□ 0.04
MRPL55-227ENST00000475832 UBTFL1P0CB47 393 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-227ENST00000475832 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
MRPL55-227ENST00000475832 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
MRPL55-227ENST00000475832 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
MRPL55-227ENST00000475832 C4BP0C0L5 1744 aa15.3■□□□□ 0.04
MRPL55-227ENST00000475832 CYP19A1P11511 503 aaPredicted RBP15.3■□□□□ 0.04
MRPL55-227ENST00000475832 ITPK1Q13572 414 aa15.3■□□□□ 0.04
MRPL55-227ENST00000475832 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
MRPL55-227ENST00000475832 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
MRPL55-227ENST00000475832 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
MRPL55-227ENST00000475832 MEIS3Q99687 375 aa15.3■□□□□ 0.04
MRPL55-227ENST00000475832 METTL22Q9BUU2 404 aaPredicted RBP15.3■□□□□ 0.04
MRPL55-227ENST00000475832 C9orf78Q9NZ63 289 aaPredicted RBP15.3■□□□□ 0.04
MRPL55-227ENST00000475832 TUBGCP6Q96RT7 1819 aa15.29■□□□□ 0.04
MRPL55-227ENST00000475832 PIP4K2AP48426 406 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-227ENST00000475832 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
MRPL55-227ENST00000475832 TFCP2L1Q9NZI6 479 aa15.29■□□□□ 0.04
MRPL55-227ENST00000475832 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-227ENST00000475832 ZNF330Q9Y3S2 320 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-227ENST00000475832 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-227ENST00000475832 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-227ENST00000475832 IGHDP01880 384 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 POLD1P28340 1107 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 IL6STP40189 918 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-227ENST00000475832 LRP10Q7Z4F1 713 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 GCC1Q96CN9 775 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 MYD88Q99836 296 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
MRPL55-227ENST00000475832 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
MRPL55-227ENST00000475832 ANKRD44Q8N8A2 993 aa15.27■□□□□ 0.04
MRPL55-227ENST00000475832 SLC16A10Q8TF71 515 aa15.27■□□□□ 0.04
MRPL55-227ENST00000475832 ZNF526Q8TF50 670 aaPredicted RBP15.26■□□□□ 0.03
MRPL55-227ENST00000475832 USP44Q9H0E7 712 aa15.26■□□□□ 0.03
MRPL55-227ENST00000475832 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
MRPL55-227ENST00000475832 A0A087WZG4 1122 aa15.25■□□□□ 0.03
MRPL55-227ENST00000475832 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
MRPL55-227ENST00000475832 CEP85Q6P2H3 762 aa15.25■□□□□ 0.03
MRPL55-227ENST00000475832 AMIGO3Q86WK7 504 aa15.25■□□□□ 0.03
MRPL55-227ENST00000475832 COL23A1Q86Y22 540 aaPredicted RBP15.25■□□□□ 0.03
MRPL55-227ENST00000475832 FLAD1Q8NFF5 587 aa15.25■□□□□ 0.03
MRPL55-227ENST00000475832 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
MRPL55-227ENST00000475832 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
MRPL55-227ENST00000475832 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
MRPL55-227ENST00000475832 CNTNAP4Q9C0A0 1308 aa15.24■□□□□ 0.03
MRPL55-227ENST00000475832 NEURL1BA8MQ27 555 aa15.24■□□□□ 0.03
MRPL55-227ENST00000475832 GRM8O00222 908 aa15.24■□□□□ 0.03
MRPL55-227ENST00000475832 SSFA2P28290 1259 aa15.24■□□□□ 0.03
MRPL55-227ENST00000475832 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms