RNA–Protein interactions for RNA: ENST00000475770.5

KRIT1-221, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 2,411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-221ENST00000475770 TMCO4Q5TGY1 634 aa10.07□□□□□ -0.8
KRIT1-221ENST00000475770 RGS12O14924 1447 aa10.07□□□□□ -0.8
KRIT1-221ENST00000475770 VAMP4O75379 141 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 RARSP54136 660 aaKnown RBP10.06□□□□□ -0.8
KRIT1-221ENST00000475770 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 TTC5Q8N0Z6 440 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
KRIT1-221ENST00000475770 KCNQ2O43526 872 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
KRIT1-221ENST00000475770 MYCNP04198 464 aaPredicted RBP10.06□□□□□ -0.8
KRIT1-221ENST00000475770 CASC1Q6TDU7 716 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 TSHZ1Q6ZSZ6 1077 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 BCL2L13Q9BXK5 485 aa10.06□□□□□ -0.8
KRIT1-221ENST00000475770 HEG1Q9ULI3 1381 aa10.05□□□□□ -0.8
KRIT1-221ENST00000475770 ZNF496Q96IT1 587 aaPredicted RBP10.05□□□□□ -0.8
KRIT1-221ENST00000475770 ASAP1Q9ULH1 1129 aa10.05□□□□□ -0.8
KRIT1-221ENST00000475770 SH3BP1Q9Y3L3 701 aa10.05□□□□□ -0.8
KRIT1-221ENST00000475770 PAPPAQ13219 1627 aa10.05□□□□□ -0.8
KRIT1-221ENST00000475770 BCAR3O75815 825 aa10.05□□□□□ -0.8
KRIT1-221ENST00000475770 ATG3Q9NT62 314 aa10.05□□□□□ -0.8
KRIT1-221ENST00000475770 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
KRIT1-221ENST00000475770 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
KRIT1-221ENST00000475770 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
KRIT1-221ENST00000475770 EGFL6Q8IUX8 553 aa10.04□□□□□ -0.8
KRIT1-221ENST00000475770 SSH1Q8WYL5 1049 aa10.04□□□□□ -0.8
KRIT1-221ENST00000475770 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
KRIT1-221ENST00000475770 ANP32AP39687 249 aaKnown RBP10.04□□□□□ -0.8
KRIT1-221ENST00000475770 PTF1AQ7RTS3 328 aa10.04□□□□□ -0.8
KRIT1-221ENST00000475770 FMNL2Q96PY5 1086 aa10.04□□□□□ -0.8
KRIT1-221ENST00000475770 TCERG1O14776 1098 aaKnown RBP10.03□□□□□ -0.8
KRIT1-221ENST00000475770 HOXB7P09629 217 aa10.03□□□□□ -0.8
KRIT1-221ENST00000475770 RINLQ6ZS11 566 aa10.03□□□□□ -0.8
KRIT1-221ENST00000475770 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
KRIT1-221ENST00000475770 ITGB4P16144 1822 aa10.03□□□□□ -0.8
KRIT1-221ENST00000475770 SOS1Q07889 1333 aaPredicted RBP10.03□□□□□ -0.8
KRIT1-221ENST00000475770 MS4A1P11836 297 aa10.03□□□□□ -0.8
KRIT1-221ENST00000475770 BRWD3Q6RI45 1802 aa10.02□□□□□ -0.8
KRIT1-221ENST00000475770 SNRPA1P09661 255 aaKnown RBP10.02□□□□□ -0.81
KRIT1-221ENST00000475770 ALDH1L2Q3SY69 923 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 PLIN1O60240 522 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 EIF2S2P20042 333 aaKnown RBP10.02□□□□□ -0.81
KRIT1-221ENST00000475770 PDE3AQ14432 1141 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 PPP4R3CPQ6ZMV5 832 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 UBR2Q8IWV8 1755 aa10.02□□□□□ -0.81
KRIT1-221ENST00000475770 NHSQ6T4R5 1651 aa10.01□□□□□ -0.81
KRIT1-221ENST00000475770 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
KRIT1-221ENST00000475770 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
KRIT1-221ENST00000475770 PALLDQ8WX93 1383 aa10.01□□□□□ -0.81
KRIT1-221ENST00000475770 APBB1O00213 710 aa10.01□□□□□ -0.81
KRIT1-221ENST00000475770 CCDC30Q5VVM6 783 aa10.01□□□□□ -0.81
KRIT1-221ENST00000475770 MRPL50Q8N5N7 158 aaKnown RBP10.01□□□□□ -0.81
KRIT1-221ENST00000475770 FRAT1Q92837 279 aaPredicted RBP10.01□□□□□ -0.81
KRIT1-221ENST00000475770 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
KRIT1-221ENST00000475770 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
KRIT1-221ENST00000475770 USP16Q9Y5T5 823 aa10□□□□□ -0.81
KRIT1-221ENST00000475770 C5P01031 1676 aa10□□□□□ -0.81
KRIT1-221ENST00000475770 KIF16BQ96L93 1317 aa10□□□□□ -0.81
KRIT1-221ENST00000475770 STK31Q9BXU1 1019 aa9.99□□□□□ -0.81
KRIT1-221ENST00000475770 CHPF2Q9P2E5 772 aa9.99□□□□□ -0.81
KRIT1-221ENST00000475770 NOB1Q9ULX3 412 aaKnown RBP9.99□□□□□ -0.81
KRIT1-221ENST00000475770 TRIM37O94972 964 aa9.99□□□□□ -0.81
KRIT1-221ENST00000475770 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
KRIT1-221ENST00000475770 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
KRIT1-221ENST00000475770 SMARCC1Q92922 1105 aaPredicted RBP9.99□□□□□ -0.81
KRIT1-221ENST00000475770 LOC102724428A0A0B4J2F2 783 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 SIK1P57059 783 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 NBPF9Q3BBW0 867 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.816e-6■■■■■ 48.1
KRIT1-221ENST00000475770 KAT6BQ8WYB5 2073 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 ANXA1P04083 346 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 PROSER3Q2NL68 480 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 C20orf194Q5TEA3 1177 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 DNAJC10Q8IXB1 793 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 BTAF1O14981 1849 aa9.98□□□□□ -0.81
KRIT1-221ENST00000475770 BRD1O95696 1058 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 PIP4K2AP48426 406 aaPredicted RBP9.97□□□□□ -0.81
KRIT1-221ENST00000475770 PDIA6Q15084 440 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 PDCL3Q9H2J4 239 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 DBF4Q9UBU7 674 aaPredicted RBP9.97□□□□□ -0.81
KRIT1-221ENST00000475770 SBF2Q86WG5 1849 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 TRIM27P14373 513 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 ZKSCAN2Q63HK3 967 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 G2E3Q7L622 706 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 OTUD6BQ8N6M0 293 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
KRIT1-221ENST00000475770 FLIIQ13045 1269 aa9.96□□□□□ -0.81
KRIT1-221ENST00000475770 ITPK1Q13572 414 aa9.96□□□□□ -0.81
KRIT1-221ENST00000475770 ATF7IPQ6VMQ6 1270 aa9.96□□□□□ -0.81
KRIT1-221ENST00000475770 SMAP1Q8IYB5 467 aaPredicted RBP9.96□□□□□ -0.81
KRIT1-221ENST00000475770 TEX13AQ9BXU3 409 aaPredicted RBP9.96□□□□□ -0.81
KRIT1-221ENST00000475770 LAMB4A4D0S4 1761 aa9.96□□□□□ -0.81
KRIT1-221ENST00000475770 IPO8O15397 1037 aaKnown RBP9.96□□□□□ -0.82
KRIT1-221ENST00000475770 NRDCO43847 1150 aa9.96□□□□□ -0.82
KRIT1-221ENST00000475770 STARD3NLO95772 234 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms