RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
NIPAL3-206ENST00000475663 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
NIPAL3-206ENST00000475663 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
NIPAL3-206ENST00000475663 DUSP27Q5VZP5 1158 aa17.14■□□□□ 0.33
NIPAL3-206ENST00000475663 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
NIPAL3-206ENST00000475663 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
NIPAL3-206ENST00000475663 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-206ENST00000475663 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
NIPAL3-206ENST00000475663 GPTP24298 496 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 PIM2Q9P1W9 311 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 ZNF652Q9Y2D9 606 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
NIPAL3-206ENST00000475663 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 GNAI1P63096 354 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
NIPAL3-206ENST00000475663 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
NIPAL3-206ENST00000475663 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
NIPAL3-206ENST00000475663 ZNF784Q8NCA9 323 aaPredicted RBP17.11■□□□□ 0.33
NIPAL3-206ENST00000475663 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
NIPAL3-206ENST00000475663 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
NIPAL3-206ENST00000475663 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-206ENST00000475663 TSPYL6Q8N831 410 aa17.1■□□□□ 0.33
NIPAL3-206ENST00000475663 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
NIPAL3-206ENST00000475663 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-206ENST00000475663 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 H0YIN7 160 aa17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 ST5P78524 1137 aa17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 BRIP1Q9BX63 1249 aa17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
NIPAL3-206ENST00000475663 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
NIPAL3-206ENST00000475663 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
NIPAL3-206ENST00000475663 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
NIPAL3-206ENST00000475663 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 PDE6BP35913 854 aa17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 ZNF34Q8IZ26 560 aa17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
NIPAL3-206ENST00000475663 ABCC12Q96J65 1359 aa17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 HOXB7P09629 217 aa17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 RASSF7Q02833 373 aa17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
NIPAL3-206ENST00000475663 ATP10DQ9P241 1426 aa17.04■□□□□ 0.32
NIPAL3-206ENST00000475663 RGL2O15211 777 aa17.04■□□□□ 0.32
NIPAL3-206ENST00000475663 C21orf2O43822 256 aa17.03■□□□□ 0.32
NIPAL3-206ENST00000475663 SRGNP10124 158 aa17.03■□□□□ 0.32
NIPAL3-206ENST00000475663 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
NIPAL3-206ENST00000475663 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
NIPAL3-206ENST00000475663 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.32
NIPAL3-206ENST00000475663 CHD4Q14839 1912 aa17.02■□□□□ 0.32
NIPAL3-206ENST00000475663 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-206ENST00000475663 NTSR2O95665 410 aa17.02■□□□□ 0.32
NIPAL3-206ENST00000475663 C3orf67Q6ZVT6 689 aa17.02■□□□□ 0.32
NIPAL3-206ENST00000475663 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
NIPAL3-206ENST00000475663 C9orf131Q5VYM1 1079 aa17.01■□□□□ 0.31
NIPAL3-206ENST00000475663 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
NIPAL3-206ENST00000475663 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
NIPAL3-206ENST00000475663 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
NIPAL3-206ENST00000475663 IL16Q14005 1332 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 PRELPP51888 382 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 TCIRG1Q13488 830 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
NIPAL3-206ENST00000475663 STYK1Q6J9G0 422 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
NIPAL3-206ENST00000475663 OLFM4Q6UX06 510 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 SLC51AQ86UW1 340 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 NLRP10Q86W26 655 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 MASTLQ96GX5 879 aa17■□□□□ 0.31
NIPAL3-206ENST00000475663 NUP98P52948 1817 aa16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 ADCY9O60503 1353 aa16.99■□□□□ 0.31
NIPAL3-206ENST00000475663 TNRC6CQ9HCJ0 1690 aaKnown RBP16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 KLRG2A4D1S0 409 aaPredicted RBP16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 NFKBIEO00221 500 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 NPR1P16066 1061 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms