RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 TFCP2L1Q9NZI6 479 aa19.31■□□□□ 0.68
MCF2L-224ENST00000475524 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
MCF2L-224ENST00000475524 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-224ENST00000475524 KSR2Q6VAB6 950 aa19.3■□□□□ 0.68
MCF2L-224ENST00000475524 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
MCF2L-224ENST00000475524 ANKRD13DQ6ZTN6 518 aa19.3■□□□□ 0.68
MCF2L-224ENST00000475524 DZIP3Q86Y13 1208 aaKnown RBP19.3■□□□□ 0.68
MCF2L-224ENST00000475524 NARFQ9UHQ1 456 aa19.3■□□□□ 0.68
MCF2L-224ENST00000475524 NOB1Q9ULX3 412 aaKnown RBP19.3■□□□□ 0.68
MCF2L-224ENST00000475524 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
MCF2L-224ENST00000475524 ADCY9O60503 1353 aa19.29■□□□□ 0.68
MCF2L-224ENST00000475524 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
MCF2L-224ENST00000475524 ATP10DQ9P241 1426 aa19.28■□□□□ 0.68
MCF2L-224ENST00000475524 TTLL7Q6ZT98 887 aa19.28■□□□□ 0.68
MCF2L-224ENST00000475524 ARHGEF1Q92888 912 aaKnown RBP19.28■□□□□ 0.68
MCF2L-224ENST00000475524 ZNF652Q9Y2D9 606 aa19.28■□□□□ 0.68
MCF2L-224ENST00000475524 ZNF330Q9Y3S2 320 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-224ENST00000475524 PNPLA7Q6ZV29 1317 aa19.27■□□□□ 0.68
MCF2L-224ENST00000475524 CAMTA2O94983 1202 aa19.27■□□□□ 0.68
MCF2L-224ENST00000475524 RFC4P35249 363 aa19.27■□□□□ 0.68
MCF2L-224ENST00000475524 RRP1P56182 461 aaKnown RBP19.27■□□□□ 0.68
MCF2L-224ENST00000475524 AIMP1Q12904 312 aaKnown RBP19.27■□□□□ 0.68
MCF2L-224ENST00000475524 PDE3AQ14432 1141 aa19.27■□□□□ 0.68
MCF2L-224ENST00000475524 HSP90AB3PQ58FF7 597 aa19.27■□□□□ 0.68
MCF2L-224ENST00000475524 GIGYF2Q6Y7W6 1299 aaKnown RBP19.27■□□□□ 0.68
MCF2L-224ENST00000475524 CASZ1Q86V15 1759 aa19.27■□□□□ 0.67
MCF2L-224ENST00000475524 ABCC4O15439 1325 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 PI4KAP2A4QPH2 592 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 ZPR1O75312 459 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 TRIM27P14373 513 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 AMIGO3Q86WK7 504 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 PI4KAP1Q8N8J0 262 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
MCF2L-224ENST00000475524 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
MCF2L-224ENST00000475524 SOCS7O14512 581 aa19.25■□□□□ 0.67
MCF2L-224ENST00000475524 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-224ENST00000475524 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
MCF2L-224ENST00000475524 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
MCF2L-224ENST00000475524 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
MCF2L-224ENST00000475524 PHF14O94880 888 aa19.24■□□□□ 0.67
MCF2L-224ENST00000475524 NEXNQ0ZGT2 675 aa19.24■□□□□ 0.67
MCF2L-224ENST00000475524 SLC16A10Q8TF71 515 aa19.24■□□□□ 0.67
MCF2L-224ENST00000475524 MAP3K2Q9Y2U5 619 aa19.24■□□□□ 0.67
MCF2L-224ENST00000475524 TRIM28Q13263 835 aaKnown RBP19.23■□□□□ 0.67
MCF2L-224ENST00000475524 COL23A1Q86Y22 540 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-224ENST00000475524 DZIP1LQ8IYY4 767 aaKnown RBP19.23■□□□□ 0.67
MCF2L-224ENST00000475524 ZBTB3Q9H5J0 574 aa19.23■□□□□ 0.67
MCF2L-224ENST00000475524 CCT4P50991 539 aaKnown RBP19.22■□□□□ 0.67
MCF2L-224ENST00000475524 TCIRG1Q13488 830 aa19.22■□□□□ 0.67
MCF2L-224ENST00000475524 INTS3Q68E01 1043 aaKnown RBP19.22■□□□□ 0.67
MCF2L-224ENST00000475524 LINS1Q8NG48 757 aa19.22■□□□□ 0.67
MCF2L-224ENST00000475524 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
MCF2L-224ENST00000475524 ALDH1L1O75891 902 aa19.21■□□□□ 0.67
MCF2L-224ENST00000475524 USPL1Q5W0Q7 1092 aa19.21■□□□□ 0.67
MCF2L-224ENST00000475524 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
MCF2L-224ENST00000475524 ARXQ96QS3 562 aa19.21■□□□□ 0.67
MCF2L-224ENST00000475524 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
MCF2L-224ENST00000475524 F6X3S4 739 aa19.2■□□□□ 0.66
MCF2L-224ENST00000475524 GYS1P13807 737 aa19.2■□□□□ 0.66
MCF2L-224ENST00000475524 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
MCF2L-224ENST00000475524 ZNF34Q8IZ26 560 aa19.2■□□□□ 0.66
MCF2L-224ENST00000475524 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
MCF2L-224ENST00000475524 BCL2L12Q9HB09 334 aa19.2■□□□□ 0.66
MCF2L-224ENST00000475524 HLFQ16534 295 aa19.19■□□□□ 0.66
MCF2L-224ENST00000475524 PARP10Q53GL7 1025 aa19.19■□□□□ 0.66
MCF2L-224ENST00000475524 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
MCF2L-224ENST00000475524 SRCIN1Q9C0H9 1055 aa19.19■□□□□ 0.66
MCF2L-224ENST00000475524 SRP68Q9UHB9 627 aaKnown RBP19.19■□□□□ 0.66
MCF2L-224ENST00000475524 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
MCF2L-224ENST00000475524 PLIN1O60240 522 aa19.17■□□□□ 0.66
MCF2L-224ENST00000475524 SMIM5Q71RC9 77 aa19.17■□□□□ 0.66
MCF2L-224ENST00000475524 MYD88Q99836 296 aa19.17■□□□□ 0.66
MCF2L-224ENST00000475524 CHMP4BQ9H444 224 aaKnown RBP19.17■□□□□ 0.66
MCF2L-224ENST00000475524 CARMIL3Q8ND23 1372 aa19.17■□□□□ 0.66
MCF2L-224ENST00000475524 NEURL1BA8MQ27 555 aa19.16■□□□□ 0.66
MCF2L-224ENST00000475524 IGKV5-2P06315 115 aa19.16■□□□□ 0.66
MCF2L-224ENST00000475524 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
MCF2L-224ENST00000475524 CLUAP1Q96AJ1 413 aa19.16■□□□□ 0.66
MCF2L-224ENST00000475524 LAMB2P55268 1798 aa19.16■□□□□ 0.66
MCF2L-224ENST00000475524 MSH5O43196 834 aa19.15■□□□□ 0.66
MCF2L-224ENST00000475524 RLBP1P12271 317 aa19.15■□□□□ 0.66
MCF2L-224ENST00000475524 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
MCF2L-224ENST00000475524 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
MCF2L-224ENST00000475524 CWC25Q9NXE8 425 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-224ENST00000475524 NIP7Q9Y221 180 aaKnown RBP eCLIP19.15■□□□□ 0.66
MCF2L-224ENST00000475524 TM4SF1P30408 202 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 FKBP8Q14318 412 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 R3HDM1Q15032 1099 aaKnown RBP19.14■□□□□ 0.65
MCF2L-224ENST00000475524 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 PPP1R42Q7Z4L9 355 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 NLRP10Q86W26 655 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 DDX19BQ9UMR2 479 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 TNNQ9UQP3 1299 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 UTYO14607 1347 aa19.14■□□□□ 0.65
MCF2L-224ENST00000475524 AAMPQ13685 434 aa19.13■□□□□ 0.65
MCF2L-224ENST00000475524 GCKRQ14397 625 aa19.13■□□□□ 0.65
MCF2L-224ENST00000475524 NFIXQ14938 502 aa19.13■□□□□ 0.65
MCF2L-224ENST00000475524 PANK1Q8TE04 598 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms