RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 NUDCQ9Y266 331 aa23.88■■□□□ 1.41
PCGF3-209ENST00000475288 KCNQ3O43525 872 aa23.87■■□□□ 1.41
PCGF3-209ENST00000475288 ERFEQ4G0M1 354 aa23.87■■□□□ 1.41
PCGF3-209ENST00000475288 TAOK3Q9H2K8 898 aa23.86■■□□□ 1.41
PCGF3-209ENST00000475288 SLX4Q8IY92 1834 aa23.86■■□□□ 1.41
PCGF3-209ENST00000475288 MASTLQ96GX5 879 aa23.85■■□□□ 1.41
PCGF3-209ENST00000475288 USP16Q9Y5T5 823 aa23.85■■□□□ 1.41
PCGF3-209ENST00000475288 HTATSF1O43719 755 aaKnown RBP23.84■■□□□ 1.41
PCGF3-209ENST00000475288 SNRPA1P09661 255 aaKnown RBP23.84■■□□□ 1.41
PCGF3-209ENST00000475288 PRPF40BQ6NWY9 871 aaKnown RBP23.84■■□□□ 1.41
PCGF3-209ENST00000475288 CCDC24Q8N4L8 307 aa23.84■■□□□ 1.41
PCGF3-209ENST00000475288 ZNF652Q9Y2D9 606 aa23.84■■□□□ 1.41
PCGF3-209ENST00000475288 NPHP1O15259 732 aa23.83■■□□□ 1.41
PCGF3-209ENST00000475288 RTF1Q92541 710 aaKnown RBP23.83■■□□□ 1.41
PCGF3-209ENST00000475288 CACNA1SQ13698 1873 aa23.83■■□□□ 1.4
PCGF3-209ENST00000475288 KLRG2A4D1S0 409 aaPredicted RBP23.82■■□□□ 1.4
PCGF3-209ENST00000475288 CNGB1Q14028 1251 aaPredicted RBP23.81■■□□□ 1.4
PCGF3-209ENST00000475288 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
PCGF3-209ENST00000475288 ZNF219Q9P2Y4 722 aaPredicted RBP23.8■■□□□ 1.4
PCGF3-209ENST00000475288 U2AF1L5P0DN76 240 aaPredicted RBP23.79■■□□□ 1.4
PCGF3-209ENST00000475288 PPP2R1AP30153 589 aa23.79■■□□□ 1.4
PCGF3-209ENST00000475288 U2AF1Q01081 240 aaKnown RBP eCLIP23.79■■□□□ 1.4
PCGF3-209ENST00000475288 COL13A1Q5TAT6 717 aaPredicted RBP23.79■■□□□ 1.4
PCGF3-209ENST00000475288 C7orf43Q8WVR3 580 aa23.79■■□□□ 1.4
PCGF3-209ENST00000475288 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
PCGF3-209ENST00000475288 PRAMEF22A3QJZ6 481 aa23.78■■□□□ 1.4
PCGF3-209ENST00000475288 NPR1P16066 1061 aa23.78■■□□□ 1.4
PCGF3-209ENST00000475288 MCM10Q7L590 875 aa23.78■■□□□ 1.4
PCGF3-209ENST00000475288 NBPF26B4DH59 902 aa23.77■■□□□ 1.4
PCGF3-209ENST00000475288 NBPF10Q6P3W6 841 aaKnown RBP23.77■■□□□ 1.4
PCGF3-209ENST00000475288 TPTE2Q6XPS3 522 aa23.77■■□□□ 1.4
PCGF3-209ENST00000475288 NBPF15Q8N660 670 aa23.77■■□□□ 1.4
PCGF3-209ENST00000475288 SCN4AP35499 1836 aa23.77■■□□□ 1.4
PCGF3-209ENST00000475288 PIP4K2AP48426 406 aaPredicted RBP23.76■■□□□ 1.39
PCGF3-209ENST00000475288 CCDC93Q567U6 631 aa23.76■■□□□ 1.39
PCGF3-209ENST00000475288 CHADLQ6NUI6 762 aa23.76■■□□□ 1.39
PCGF3-209ENST00000475288 L3MBTL3Q96JM7 780 aaPredicted RBP23.76■■□□□ 1.39
PCGF3-209ENST00000475288 IQCA1LA6NCM1 817 aa23.75■■□□□ 1.39
PCGF3-209ENST00000475288 DDNO94850 711 aaPredicted RBP23.75■■□□□ 1.39
PCGF3-209ENST00000475288 CREBZFQ9NS37 354 aa23.75■■□□□ 1.39
PCGF3-209ENST00000475288 TAF7Q15545 349 aaPredicted RBP23.74■■□□□ 1.39
PCGF3-209ENST00000475288 FKBP4Q02790 459 aaKnown RBP eCLIP23.73■■□□□ 1.39
PCGF3-209ENST00000475288 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
PCGF3-209ENST00000475288 KDM3BQ7LBC6 1761 aa23.73■■□□□ 1.39
PCGF3-209ENST00000475288 HSPA1AP0DMV8 641 aaKnown RBP23.72■■□□□ 1.39
PCGF3-209ENST00000475288 HSPA1BP0DMV9 641 aaKnown RBP23.72■■□□□ 1.39
PCGF3-209ENST00000475288 DCTN1Q14203 1278 aa23.72■■□□□ 1.39
PCGF3-209ENST00000475288 RTKN2Q8IZC4 609 aa23.72■■□□□ 1.39
PCGF3-209ENST00000475288 LDHDQ86WU2 507 aa23.71■■□□□ 1.39
PCGF3-209ENST00000475288 ALDH1B1P30837 517 aa23.7■■□□□ 1.38
PCGF3-209ENST00000475288 TNS4Q8IZW8 715 aa23.7■■□□□ 1.38
PCGF3-209ENST00000475288 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
PCGF3-209ENST00000475288 PASKQ96RG2 1323 aa23.69■■□□□ 1.38
PCGF3-209ENST00000475288 ERVV-1B6SEH8 477 aa23.69■■□□□ 1.38
PCGF3-209ENST00000475288 TAF1DQ9H5J8 278 aaPredicted RBP23.69■■□□□ 1.38
PCGF3-209ENST00000475288 DLG5Q8TDM6 1919 aa23.69■■□□□ 1.38
PCGF3-209ENST00000475288 RIC1Q4ADV7 1423 aa23.68■■□□□ 1.38
PCGF3-209ENST00000475288 SNED1Q8TER0 1413 aa23.68■■□□□ 1.38
PCGF3-209ENST00000475288 IBTKQ9P2D0 1353 aaPredicted RBP23.68■■□□□ 1.38
PCGF3-209ENST00000475288 CAPN15O75808 1086 aa23.68■■□□□ 1.38
PCGF3-209ENST00000475288 POTEIP0CG38 1075 aa23.68■■□□□ 1.38
PCGF3-209ENST00000475288 POTEJP0CG39 1038 aa23.68■■□□□ 1.38
PCGF3-209ENST00000475288 HLFQ16534 295 aa23.67■■□□□ 1.38
PCGF3-209ENST00000475288 CRY2Q49AN0 593 aa23.67■■□□□ 1.38
PCGF3-209ENST00000475288 NYXQ9GZU5 481 aa23.67■■□□□ 1.38
PCGF3-209ENST00000475288 ADAMTSL1Q8N6G6 1762 aa23.67■■□□□ 1.38
PCGF3-209ENST00000475288 NEFMP07197 916 aa23.66■■□□□ 1.38
PCGF3-209ENST00000475288 NUP98P52948 1817 aa23.66■■□□□ 1.38
PCGF3-209ENST00000475288 PSMD1Q99460 953 aa23.65■■□□□ 1.38
PCGF3-209ENST00000475288 ZNF277Q9NRM2 450 aaPredicted RBP23.65■■□□□ 1.38
PCGF3-209ENST00000475288 CNTNAP1P78357 1384 aa23.65■■□□□ 1.38
PCGF3-209ENST00000475288 MAP3K15Q6ZN16 1313 aa23.64■■□□□ 1.38
PCGF3-209ENST00000475288 FZD9O00144 591 aa23.64■■□□□ 1.37
PCGF3-209ENST00000475288 IARSP41252 1262 aaKnown RBP23.64■■□□□ 1.37
PCGF3-209ENST00000475288 CC2D2BQ6DHV5 1058 aa23.64■■□□□ 1.37
PCGF3-209ENST00000475288 ZNF541Q9H0D2 1346 aa23.63■■□□□ 1.37
PCGF3-209ENST00000475288 GTF2E1P29083 439 aaPredicted RBP23.63■■□□□ 1.37
PCGF3-209ENST00000475288 GRIPAP1Q4V328 841 aa23.63■■□□□ 1.37
PCGF3-209ENST00000475288 PLEKHF1Q96S99 279 aa23.63■■□□□ 1.37
PCGF3-209ENST00000475288 MIS18AQ9NYP9 233 aa23.63■■□□□ 1.37
PCGF3-209ENST00000475288 HACL1Q9UJ83 578 aa23.63■■□□□ 1.37
PCGF3-209ENST00000475288 ABCC12Q96J65 1359 aa23.63■■□□□ 1.37
PCGF3-209ENST00000475288 ITGBL1O95965 494 aaPredicted RBP23.62■■□□□ 1.37
PCGF3-209ENST00000475288 HOXA10P31260 410 aaPredicted RBP23.62■■□□□ 1.37
PCGF3-209ENST00000475288 EIF4A1P60842 406 aaKnown RBP23.62■■□□□ 1.37
PCGF3-209ENST00000475288 SYNE4Q8N205 404 aa23.62■■□□□ 1.37
PCGF3-209ENST00000475288 ERBB4Q15303 1308 aa23.61■■□□□ 1.37
PCGF3-209ENST00000475288 FAM177BA6PVY3 158 aa23.61■■□□□ 1.37
PCGF3-209ENST00000475288 OLFM4Q6UX06 510 aa23.61■■□□□ 1.37
PCGF3-209ENST00000475288 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
PCGF3-209ENST00000475288 PNMA8AQ86V59 439 aaPredicted RBP23.61■■□□□ 1.37
PCGF3-209ENST00000475288 GPC2Q8N158 579 aa23.61■■□□□ 1.37
PCGF3-209ENST00000475288 MKRN1Q9UHC7 482 aaKnown RBP23.61■■□□□ 1.37
PCGF3-209ENST00000475288 NFE2L2Q16236 605 aa23.6■■□□□ 1.37
PCGF3-209ENST00000475288 TMEM88BA6NKF7 163 aa23.59■■□□□ 1.37
PCGF3-209ENST00000475288 EPHX2P34913 555 aa23.59■■□□□ 1.37
PCGF3-209ENST00000475288 PNNQ9H307 717 aaKnown RBP23.59■■□□□ 1.37
PCGF3-209ENST00000475288 JDP2Q8WYK2 163 aa23.58■■□□□ 1.37
PCGF3-209ENST00000475288 UBN2Q6ZU65 1347 aa23.58■■□□□ 1.36
PCGF3-209ENST00000475288 TTLL7Q6ZT98 887 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms