RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
PDPN-204ENST00000475043 DPEP1P16444 411 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
PDPN-204ENST00000475043 PIP4K2AP48426 406 aaPredicted RBP12.44□□□□□ -0.42
PDPN-204ENST00000475043 NFIXQ14938 502 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 BICDL1Q6ZP65 573 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
PDPN-204ENST00000475043 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 USP16Q9Y5T5 823 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
PDPN-204ENST00000475043 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDPN-204ENST00000475043 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
PDPN-204ENST00000475043 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
PDPN-204ENST00000475043 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
PDPN-204ENST00000475043 SERPINB2P05120 415 aa12.42□□□□□ -0.42
PDPN-204ENST00000475043 RIPK4P57078 832 aa12.42□□□□□ -0.42
PDPN-204ENST00000475043 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
PDPN-204ENST00000475043 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
PDPN-204ENST00000475043 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
PDPN-204ENST00000475043 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
PDPN-204ENST00000475043 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
PDPN-204ENST00000475043 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
PDPN-204ENST00000475043 CHRNA5P30532 468 aa12.41□□□□□ -0.42
PDPN-204ENST00000475043 NEUROD2Q15784 382 aa12.41□□□□□ -0.42
PDPN-204ENST00000475043 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
PDPN-204ENST00000475043 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
PDPN-204ENST00000475043 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
PDPN-204ENST00000475043 ARFGEF1Q9Y6D6 1849 aa12.4□□□□□ -0.42
PDPN-204ENST00000475043 KCNA3P22001 575 aa12.4□□□□□ -0.42
PDPN-204ENST00000475043 TBC1D9BQ66K14 1250 aa12.4□□□□□ -0.42
PDPN-204ENST00000475043 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
PDPN-204ENST00000475043 NPHP1O15259 732 aa12.39□□□□□ -0.43
PDPN-204ENST00000475043 TMPOP42166 694 aaKnown RBP12.39□□□□□ -0.43
PDPN-204ENST00000475043 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
PDPN-204ENST00000475043 ARHGAP27Q6ZUM4 889 aa12.39□□□□□ -0.43
PDPN-204ENST00000475043 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
PDPN-204ENST00000475043 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
PDPN-204ENST00000475043 DALRD3Q5D0E6 543 aaKnown RBP12.38□□□□□ -0.43
PDPN-204ENST00000475043 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
PDPN-204ENST00000475043 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 TSPYL4Q9UJ04 414 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 CARMIL3Q8ND23 1372 aa12.38□□□□□ -0.43
PDPN-204ENST00000475043 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
PDPN-204ENST00000475043 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
PDPN-204ENST00000475043 CCDC24Q8N4L8 307 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
PDPN-204ENST00000475043 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
PDPN-204ENST00000475043 H0YIN7 160 aa12.36□□□□□ -0.43
PDPN-204ENST00000475043 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
PDPN-204ENST00000475043 MYL6BP14649 208 aa12.35□□□□□ -0.43
PDPN-204ENST00000475043 NUBP1P53384 320 aa12.35□□□□□ -0.43
PDPN-204ENST00000475043 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
PDPN-204ENST00000475043 CLEC4GQ6UXB4 293 aa12.35□□□□□ -0.43
PDPN-204ENST00000475043 CNBD1Q8NA66 436 aa12.35□□□□□ -0.43
PDPN-204ENST00000475043 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
PDPN-204ENST00000475043 LAS1LQ9Y4W2 734 aaKnown RBP12.35□□□□□ -0.43
PDPN-204ENST00000475043 ADCY9O60503 1353 aa12.34□□□□□ -0.43
PDPN-204ENST00000475043 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
PDPN-204ENST00000475043 PDE6BP35913 854 aa12.34□□□□□ -0.43
PDPN-204ENST00000475043 ST5P78524 1137 aa12.34□□□□□ -0.43
PDPN-204ENST00000475043 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDPN-204ENST00000475043 BRIP1Q9BX63 1249 aa12.34□□□□□ -0.43
PDPN-204ENST00000475043 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
PDPN-204ENST00000475043 NUP98P52948 1817 aa12.33□□□□□ -0.44
PDPN-204ENST00000475043 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
PDPN-204ENST00000475043 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
PDPN-204ENST00000475043 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
PDPN-204ENST00000475043 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
PDPN-204ENST00000475043 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
PDPN-204ENST00000475043 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
PDPN-204ENST00000475043 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
PDPN-204ENST00000475043 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
PDPN-204ENST00000475043 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDPN-204ENST00000475043 C1QTNF8P60827 252 aa12.32□□□□□ -0.44
PDPN-204ENST00000475043 HLFQ16534 295 aa12.32□□□□□ -0.44
PDPN-204ENST00000475043 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
PDPN-204ENST00000475043 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
PDPN-204ENST00000475043 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 SBF1O95248 1867 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
PDPN-204ENST00000475043 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 APAF1O14727 1248 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 RGL2O15211 777 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 MAP3K13O43283 966 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms